James A. Pippin

Biochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile

0.165Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

3D chromatin-based variant-to-gene maps across 57 human cell types reveal the cellular and genetic architecture of autoimmune disease susceptibility

medRxiv(2024)10.1101/2024.08.12.24311676

Top 70%

0.165DataRank

Top 70%2 citations

Prabhat Sharma, Laura Cook, Zachary Mount, Rajan M. Thomas, Nikhil N Kulkarni +25 more

Papers

Driven by 29 papers — median percentile 30. Top paper: “Genome-wide association study implicates novel loci and reveals candidate effector genes for longitudinal pediatric bone accrual”.

Genome-wide association study implicates novel loci and reveals candidate effector genes for longitudinal pediatric bone accrual

Genome Biology(2021)10.1186/s13059-020-02207-9

N/A

4.2DataRank · unranked

149 citations

Yadav Wagley, James A. Pippin, Ahmed Elhakeem, Gregory P. Way, Matthew C. Pahl +29 more

Osteoporosis GWAS-implicated DNM3 locus contextually regulates osteoblastic and chondrogenic fate of mesenchymal stem/progenitor cells through oscillating miR-199a-5p levels

JBMR Plus(2024)10.1093/jbmrpl/ziae051

N/A

0.377DataRank · unranked

9 citations

James A. Pippin, Solomon Chang, J. Redmond, Alessandra Chesi, Andrew D. Wells +6 more

Dynamic chromatin architecture identifies new autoimmune-associated enhancers for IL2 and novel genes regulating CD4+ T cell activation

eLife(2024)10.7554/elife.96852

N/A

0.328DataRank · unranked

7 citations

Prabhat Sharma, Rajan M. Thomas, Zachary Thompson, Zachary Mount, James A. Pippin +7 more

Perturbation of the insomnia WDR90 genome-wide association studies locus pinpoints rs3752495 as a causal variant influencing distal expression of neighboring gene, PIG-Q

SLEEP(2024)10.1093/sleep/zsae085

N/A

0.292DataRank · unranked

6 citations

Sheridan H. Littleton, Matthew C. Pahl, Amber Zimmerman, Alessandra Chesi, Justin Palermo +10 more

Genome-wide association study implicates novel loci and reveals candidate effector genes for longitudinal pediatric bone accrual through variant-to-gene mapping

medRxiv(2020)10.1101/2020.02.17.20024133

N/A

0.290DataRank · unranked

5 citations

Yadav Wagley, James A. Pippin, Ahmed Elhakeem, Gregory P. Way, Shana E. McCormack +28 more

3D genomic features across >50 diverse cell types reveal insights into the genomic architecture of childhood obesity

eLife(2024)10.7554/elife.95411

N/A

0.255DataRank · unranked

4 citations

Matthew C. Pahl, James A. Pippin, Chun Su, Sheridan H. Littleton, Prabhat Sharma +23 more

3D chromatin-based variant-to-gene maps across 57 human cell types reveal the cellular and genetic architecture of autoimmune disease susceptibility

medRxiv(2024)10.1101/2024.08.12.24311676

Top 70%

0.165DataRank

Top 70%2 citations

Prabhat Sharma, Laura Cook, Zachary Mount, Rajan M. Thomas, Nikhil N Kulkarni +25 more

Dynamic chromatin architecture identifies new autoimmune-associated enhancers for IL2 and novel genes regulating CD4+ T cell activation

eLife(2024)10.7554/elife.96852.3

N/A

0.104DataRank · unranked

1 citations

Prabhat Sharma, Rajan M. Thomas, Zachary Thompson, Zachary Mount, James A. Pippin +7 more

Implicating effector genes at COVID-19 GWAS loci using promoter-focused Capture-C in disease-relevant immune cell types

Genome biology(2022)10.1186/s13059-022-02691-1

N/A

0DataRank · unranked

48 citations

Carole Le Coz, Chun Su, Prabhat Sharma, Rajan M. Thomas, James A. Pippin +10 more

Variant-to-gene-mapping analyses reveal a role for pancreatic islet cells in conferring genetic susceptibility to sleep-related traits

SLEEP(2022)10.1093/sleep/zsac109

N/A

0DataRank · unranked

15 citations

Matthew C. Pahl, James A. Pippin, Chun Su, Matthew E. Johnson, Alessandra Chesi +8 more

Zebrafish screen of high-confidence effector genes at insomnia GWAS loci implicates conserved regulators of sleep-wake behaviors

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.05.511011

N/A

0DataRank · unranked

4 citations

Fusun Doldur-Balli, Brendan T Keenan, Zoe Y. Shetty, Justin Palermo, Alessandra Chesi +13 more

Variant-to-gene mapping followed by cross-species genetic screening identifies GPI-anchor biosynthesis as a regulator of sleep

Science Advances(2023)10.1126/sciadv.abq0844

N/A

0DataRank · unranked

50 citations

Alessandra Chesi, Amber Zimmerman, Shilpa Sonti, Matthew C. Pahl, Chiara Lasconi +10 more

Patient-derived Colonoids From Disease-spared Tissue Retain Inflammatory Bowel Disease-specific Transcriptomic Signatures

Gastro Hep Advances(2023)10.1016/j.gastha.2023.05.003

N/A

0DataRank · unranked

10 citations

Yusen Zhou, Hongbo M. Xie, Gloria E. Soto, Tiana D. Johnson, Madison A. Stoltz +13 more

3D genomic features across >50 diverse cell types reveal insights into the genomic architecture of childhood obesity

medRxiv(2023)10.1101/2023.08.30.23294092

N/A

0DataRank · unranked

4 citations

Matthew C. Pahl, James A. Pippin, Chun Su, Sheridan H. Littleton, Prabhat Sharma +22 more

Perturbation of the insomnia WDR90 GWAS locus pinpoints rs3752495 as a causal variant influencing distal expression of neighboring gene, PIG-Q

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.17.553739

N/A

0DataRank · unranked

1 citations

Sheridan H. Littleton, Matthew C. Pahl, Amber Zimmerman, Alessandra Chesi, Justin Palermo +10 more

Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3’ UTR of FAIM2

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.21.553157

N/A

0DataRank · unranked

1 citations

Bao Khanh Trang, Christina M. Volpe, Kieona Cook, Nicole DeBruyne, Jean Ann Maguire +9 more

Variant-to-function analysis of the childhood obesity chr12q13 locus implicates rs7132908 as a causal variant within the 3′ UTR of FAIM2

Cell Genomics(2024)10.1016/j.xgen.2024.100556

N/A

0DataRank · unranked

18 citations

Bao Khanh Trang, Christina M. Volpe, Kieona Cook, Nicole DeBruyne, Jean Ann Maguire +12 more

Variant to gene mapping for carpal tunnel syndrome risk loci implicates skeletal muscle regulatory elements

EBioMedicine(2024)10.1016/j.ebiom.2024.105038

N/A

0DataRank · unranked

5 citations

Lin Liu, James A. Pippin, Yadav Wagley, Keith D. Boehm, Kurt D. Hankenson +4 more

Large-scale multi-omic analysis identifies noncoding somatic driver mutations and nominates ZFP36L2 as a driver gene for pancreatic ductal adenocarcinoma

medRxiv(2024)10.1101/2024.09.22.24314165

N/A

0DataRank · unranked

1 citations

Aidan O’Brien, Minal Patel, Daina Eiser, Michael Mobaraki, Irene Collins +18 more

Large-scale multiomic analysis identifies non-coding somatic driver mutations and nominates ZFP36L2 as a driver gene for pancreatic ductal adenocarcinoma

Gut(2025)10.1136/gutjnl-2025-335152

N/A

0DataRank · unranked

2 citations

Aidan O’Brien, Minal Patel, Daina Eiser, Michael Mobaraki, Irene Collins +19 more

Cross-species variant-to-function analyses implicate MEIS1 in conferring sleep abnormalities and impaired cerebellar development

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.05.665539

N/A

0DataRank · unranked

2 citations

Erika Almeraya Del Valle, Matthew C. Pahl, Fusun Doldur-Balli, Brendan T Keenan, Patrick Z. Liu +13 more

Multimodal analysis of in vitro hematopoiesis reveals blood cell-specific genetic impacts on complex disease traits

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.23.655825

N/A

0DataRank · unranked

0 citations

Bao Khanh Trang, Carson Shalaby, James A. Pippin, James Garifallou, Struan F.A. Grant +2 more

Mapping effector genes at lupus GWAS loci using promoter Capture-C in follicular helper T cells

Nature Communications(2020)10.1038/s41467-020-17089-5

N/A

0DataRank · unranked

95 citations

Matthew E. Johnson, Annabel Torres, Rajan M. Thomas, Elisabetta Manduchi, Prabhat Sharma +11 more

Variant-to-Gene-Mapping Analyses Reveal a Role for the Hypothalamus in Genetic Susceptibility to Inflammatory Bowel Disease

Cellular and Molecular Gastroenterology and Hepatology(2020)10.1016/j.jcmgh.2020.10.004

N/A

0DataRank · unranked

36 citations

Matthew C. Pahl, Diana L. Cousminer, Claudia A. Doege, Alessandra Chesi, Kenyaita M. Hodge +12 more

Cis-regulatory architecture of human ESC-derived hypothalamic neuron differentiation aids in variant-to-gene mapping of relevant complex traits

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.06.146951

N/A

0DataRank · unranked

5 citations

Claudia A. Doege, Kenyaita M. Hodge, Sheridan H. Littleton, Michelle E. Leonard, Sumei Lu +16 more

Cis-regulatory architecture of human ESC-derived hypothalamic neuron differentiation aids in variant-to-gene mapping of relevant complex traits

Nature Communications(2021)10.1038/s41467-021-27001-4

N/A

0DataRank · unranked

50 citations

Claudia A. Doege, Kenyaita M. Hodge, Sheridan H. Littleton, Michelle E. Leonard, Sumei Lu +18 more

3D promoter architecture re-organization during iPSC-derived neuronal cell differentiation implicates target genes for neurodevelopmental disorders

Progress in Neurobiology(2021)10.1016/j.pneurobio.2021.102000

N/A

0DataRank · unranked

49 citations

Mariana Argenziano, Sumei Lu, James A. Pippin, Matthew C. Pahl, Michelle E. Leonard +7 more

Colorectal Cancer-Associated Smad4 R361 Hotspot Mutations Boost Wnt/β-Catenin Signaling through Enhanced Smad4–LEF1 Binding

Molecular Cancer Research(2021)10.1158/1541-7786.mcr-20-0721

N/A

0DataRank · unranked

17 citations

Priyanka Sehgal, Katharina E. Hayer, Manuel Torres-Diz, James A. Pippin, Struan F.A. Grant +2 more

3D chromatin maps of the human pancreas reveal lineage-specific regulatory architecture of T2D risk

Cell Metabolism(2022)10.1016/j.cmet.2022.08.014

N/A

0DataRank · unranked

87 citations

Long Gao, Catherine Lee May, James A. Pippin, Keith D. Boehm, Michelle Lee +8 more

James A. Pippin

Indexed papers

Top data-sharing exemplar

Papers