Sydney I. Ramirez

Also affiliated with UC San Diego Health System, University of California San Diego

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 25 papers. Top paper: “Targets of T Cell Responses to SARS-CoV-2 Coronavirus in Humans with COVID-19 Disease and Unexposed Individuals”.

Targets of T Cell Responses to SARS-CoV-2 Coronavirus in Humans with COVID-19 Disease and Unexposed Individuals

Cell(2020)10.1016/j.cell.2020.05.015

N/A

1.2DataRank · unranked

4014 citations

Daniela Weiskopf, Sydney I. Ramirez, José Mateus, Jennifer M. Dan, Carolyn Rydyznski Moderbacher +15 more

Antigen-Specific Adaptive Immunity to SARS-CoV-2 in Acute COVID-19 and Associations with Age and Disease Severity

Cell(2020)10.1016/j.cell.2020.09.038

N/A

1.1DataRank · unranked

1960 citations

Sydney I. Ramirez, Jennifer M. Dan, Alba Grifoni, Kathryn M. Hastie, Daniela Weiskopf +19 more

Selective and cross-reactive SARS-CoV-2 T cell epitopes in unexposed humans

Science(2020)10.1126/science.abd3871

N/A

1.1DataRank · unranked

1276 citations

Alba Grifoni, Alison Tarke, John Sidney, Sydney I. Ramirez, Jennifer M. Dan +21 more

Bamlanivimab therapy for acute COVID-19 does not blunt SARS-CoV-2–specific memory T cell responses

JCI Insight(2022)10.1172/jci.insight.163471

N/A

0.587DataRank · unranked

13 citations

Alba Grifoni, Daniela Weiskopf, Urvi M. Parikh, Amy Heaps, Farhoud Faraji +15 more

Early antiviral CD4+ and CD8+ T cells are associated with upper airway clearance of SARS-CoV-2

JCI Insight(2024)10.1172/jci.insight.186078

N/A

0.540DataRank · unranked

13 citations

Paul Lopez, Farhoud Faraji, Urvi M. Parikh, Amy Heaps, Justin Ritz +17 more

Impact of SARS-CoV-2 variants on the total CD4+ and CD8+ T cell reactivity in infected or vaccinated individuals

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100355

N/A

0DataRank · unranked

676 citations

John Sidney, Nils Methot, Esther Dawen Yu, Yun Zhang, Jennifer M. Dan +16 more

Comprehensive analysis of T cell immunodominance and immunoprevalence of SARS-CoV-2 epitopes in COVID-19 cases

Cell Reports Medicine(2021)10.1016/j.xcrm.2021.100204

N/A

0DataRank · unranked

579 citations

John Sidney, Conner K. Kidd, Jennifer M. Dan, Sydney I. Ramirez, Esther Dawen Yu +17 more

AI-guided discovery of the invariant host response to viral pandemics

EBioMedicine(2021)10.1016/j.ebiom.2021.103390

N/A

0DataRank · unranked

54 citations

Gajanan D. Katkar, Soni Khandelwal, Mahdi Behroozikhah, Amanraj Claire, Vanessa Castillo +17 more

Profiling Transcription Initiation in Peripheral Leukocytes Reveals Severity-Associated Cis-Regulatory Elements in Critical COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.24.457187

N/A

0DataRank · unranked

8 citations

Sascha H. Duttke, Mazen Odish, Hiep D. Le, Emily A. Hansen, Celina T. Nguyen +21 more

Development of a T cell-based immunodiagnostic system to effectively distinguish SARS-CoV-2 infection and COVID-19 vaccination status

Cell Host & Microbe(2022)10.1016/j.chom.2022.02.003

N/A

0DataRank · unranked

51 citations

Eric Wang, Emily Garrigan, Benjamin Goodwin, Aaron Sutherland, Alison Tarke +15 more

Genomic Hippo Pathway Alterations and Persistent YAP/TAZ Activation: New Hallmarks in Head and Neck Cancer

Cells(2022)10.3390/cells11081370

N/A

0DataRank · unranked

39 citations

Sydney I. Ramirez, Paola Y. Anguiano Quiroz, Amaya N. Mendez-Molina, J. Silvio Gutkind, Farhoud Faraji

Bamlanivimab therapy for acute COVID-19 does not blunt SARS-CoV-2-specific memory T cell responses

UNC Libraries(2022)10.17615/473v-1p84

N/A

0DataRank · unranked

0 citations

Urvi M. Parikh, Judith S. Currier, Shane Crotty, Carlee Moser, Alessandro Sette +14 more

High-throughput chemogenetic drug screening reveals PKC-RhoA/PKN as a targetable signaling vulnerability in GNAQ-driven uveal melanoma

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.101244

N/A

0DataRank · unranked

25 citations

Simone Lubrano, Michele Ceribelli, Damiano Cosimo Rigiracciolo, Robert Saddawi‐Konefka, Farhoud Faraji +18 more

Dynamic activity in cis-regulatory elements of leukocytes identifies transcription factor activation and stratifies COVID-19 severity in ICU patients

Cell Reports Medicine(2023)10.1016/j.xcrm.2023.100935

N/A

0DataRank · unranked

18 citations

Sascha H. Duttke, Mazen Odish, Hiep D. Le, Emily A. Hansen, Celina T. Nguyen +21 more

YAP-Driven Malignant Reprogramming of Epithelial Stem Cells at Single Cell Resolution

Research Square(2023)10.21203/rs.3.rs-3426301/v1

N/A

0DataRank · unranked

4 citations

Farhoud Faraji, Sydney I. Ramirez, Lauren Clubb, Kuniaki Sato, Paola Anguiano Quiroz +15 more

Early antiviral CD4 and CD8 T cell responses and antibodies are associated with upper respiratory tract clearance of SARS-CoV-2

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.25.564014

N/A

0DataRank · unranked

3 citations

Paul Lopez, Farhoud Faraji, Urvi M. Parikh, Amy Heaps, Justin Ritz +17 more

Immunological memory diversity in the human upper airway

Nature(2024)10.1038/s41586-024-07748-8

N/A

0DataRank · unranked

99 citations

Farhoud Faraji, L. Benjamin Hills, Paul Lopez, Benjamin Goodwin, Hannah D. Stacey +10 more

SARS-CoV-2 Monoclonal Antibody Treatment Followed by Vaccination Shifts Human Memory B-Cell Epitope Recognition, Suggesting Antibody Feedback

The Journal of Infectious Diseases(2024)10.1093/infdis/jiae371

N/A

0DataRank · unranked

13 citations

Sydney I. Ramirez, Hallie Cohn, Urvi M. Parikh, Amy Heaps, Scott F. Sieg +22 more

FAK inhibition combined with the RAF-MEK clamp avutometinib overcomes resistance to targeted and immune therapies in BRAF V600E melanoma

Cancer Cell(2025)10.1016/j.ccell.2025.02.001

N/A

0DataRank · unranked

38 citations

Rodolfo Daniel Cervantes‐Villagrana, Farhoud Faraji, Sydney I. Ramirez, Kuniaki Sato, Sendi Rafael Adame-Garcia +15 more

YAP-driven malignant reprogramming of oral epithelial stem cells at single cell resolution

Nature Communications(2025)10.1038/s41467-024-55660-6

N/A

0DataRank · unranked

18 citations

Sydney I. Ramirez, Lauren Clubb, Kuniaki Sato, Valeria Burghi, Thomas S. Hoang +18 more

Sequential class switching generates antigen-specific gut IgA from IgG1 B cells

Immunity(2025)10.1016/j.immuni.2025.10.022

N/A

0DataRank · unranked

12 citations

Hailong Meng, Gisela Gabernet, Gaspar A. Pacheco, Shahab Saghaei, Sydney I. Ramirez +17 more

Immunological memory to SARS-CoV-2 assessed for up to eight months after infection

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.15.383323

N/A

0DataRank · unranked

146 citations

Jose Mateus, Yu Kato, Kathryn M. Hastie, Esther Dawen Yu, Caterina E. Faliti +16 more

Comprehensive analysis of T cell immunodominance and immunoprevalence of SARS-CoV-2 epitopes in COVID-19 cases

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.08.416750

N/A

0DataRank · unranked

87 citations

John Sidney, Conner K. Kidd, Jennifer M. Dan, Sydney I. Ramirez, Esther Dawen Yu +17 more

AI-guided discovery of the invariant host response to viral pandemics

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.21.305698

N/A

0DataRank · unranked

12 citations

Gajanan D. Katkar, Soni Khandelwal, Mahdi Behroozikhah, Amanraj Claire, Vanessa Castillo +17 more

Immunological memory to SARS-CoV-2 assessed for up to 8 months after infection

Science(2021)10.1126/science.abf4063

N/A

0DataRank · unranked

3012 citations

José Mateus, Yu Kato, Kathryn M. Hastie, Esther Dawen Yu, Caterina E. Faliti +16 more