James L. Manley

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Papers

Driven by 27 papers. Top paper: “A Novel Protein Factor Is Required for Use of Distal Alternative 5' Splice Sites In Vitro”.

A Novel Protein Factor Is Required for Use of Distal Alternative 5' Splice Sites In Vitro

Molecular and Cellular Biology(1991)10.1128/mcb.11.12.5945-5953.1991

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1.6DataRank · unranked

22 citations

James L. Manley, Joan E. Harper

Alternative polyadenylation of mRNA precursors

Nature Reviews Molecular Cell Biology(2016)10.1038/nrm.2016.116

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1.1DataRank · unranked

1253 citations

James L. Manley, Bin Tian

SETX (senataxin), the helicase mutated in AOA2 and ALS4, functions in autophagy regulation

Autophagy(2020)10.1080/15548627.2020.1796292

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0DataRank · unranked

65 citations

Shuang Feng, Yueh-Lin Tsai, Wencheng Li, Paola Rinchetti, Ubayed Muhith +13 more

Burkitt lymphoma-related TCF3 mutations alter TCF3 alternative splicing by disrupting hnRNPH1 binding

RNA Biology(2020)10.1080/15476286.2020.1772559

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0DataRank · unranked

14 citations

Lizhi Liu, Erin G. Conlon, James L. Manley, Takashi Yamazaki

Widespread intron retention impairs protein homeostasis in C9orf72 ALS brains

Genome Research(2020)10.1101/gr.265298.120

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0DataRank · unranked

51 citations

Erin G. Conlon, James L. Manley, Donald C. Rio, Qingqing Wang

ALS/FTD-associated protein FUS induces mitochondrial dysfunction by preferentially sequestering respiratory chain complex mRNAs

Genes & Development(2020)10.1101/gad.335836.119

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0DataRank · unranked

83 citations

Tristan H. Coady, Lei Lü, Dinghai Zheng, Isabel Alland, Bin Tian +3 more

SF3B1 mutant-induced missplicing of MAP3K7 causes anemia in myelodysplastic syndromes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.24.169052

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0DataRank · unranked

9 citations

Zhaoqi Liu, Abdullah Mahmood Ali, Xin Wei, Alex Penson, Jian Zhang +6 more

SF3B1 mutant-induced missplicing of MAP3K7 causes anemia in myelodysplastic syndromes

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2111703119

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0DataRank · unranked

60 citations

Zhaoqi Liu, Abdullah Mahmood Ali, Xin Wei, Alex Penson, Jian Zhang +6 more

Multiple ways to a dead end: diverse mechanisms by which ALS mutant genes induce cell death

Cell Cycle(2021)10.1080/15384101.2021.1886661

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0DataRank · unranked

7 citations

James L. Manley, Yueh-Lin Tsai

Replication protein A associates with nucleolar R loops and regulates rRNA transcription and nucleolar morphology

Genes & Development(2021)10.1101/gad.348858.121

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0DataRank · unranked

27 citations

James L. Manley, Shuang Feng

DHX15 is involved in SUGP1-mediated RNA missplicing by mutant SF3B1 in cancer

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2216712119

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0DataRank · unranked

50 citations

Ji Huang, Ke Xu, Peiqi Xing, Yue Huang, Zhaoqi Liu +3 more

Nuclear RNA transcript levels modulate nucleocytoplasmic distribution of ALS/FTD-associated protein FUS

Scientific Reports(2022)10.1038/s41598-022-12098-4

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0DataRank · unranked

18 citations

Yu Chun Mu, James L. Manley, Yueh-Lin Tsai

A nucleolar long “non-coding” RNA encodes a novel protein that functions in response to stress

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2221109120

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0DataRank · unranked

23 citations

Anthony Desotell, Alison B. Ross, Marko Jovanovic, James L. Manley, Shuang Feng

Characterization of the SF3B1–SUGP1 interface reveals how numerous cancer mutations cause mRNA missplicing

Genes & Development(2023)10.1101/gad.351154.123

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0DataRank · unranked

22 citations

Jindou Xie, Ji Huang, Xiangyang Liu, Ruihong Xu, Jonas Tholen +5 more

The E592K variant of SF3B1 creates unique RNA missplicing and associates with high-risk MDS without ring sideroblasts

Research Square(2023)10.21203/rs.3.rs-2802265/v1

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0DataRank · unranked

2 citations

Jonathan P. Ling, Jian Zhang, Eric Helmenstine, Wencke Walter, Riley E. Bergman +15 more

Modulation of diverse biological processes by CPSF, the master regulator of mRNA 3′ ends

RNA(2024)10.1261/rna.080108.124

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0DataRank · unranked

10 citations

James L. Manley, Lizhi Liu

Non-canonical isoforms of the mRNA polyadenylation factor WDR33 regulate STING-mediated immune responses

Cell Reports(2024)10.1016/j.celrep.2024.113886

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0DataRank · unranked

11 citations

James L. Manley, Lizhi Liu

The E592K variant of SF3B1 creates unique RNA missplicing and associates with high-risk MDS without ring sideroblasts

Blood Advances(2024)10.1182/bloodadvances.2023011260

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0DataRank · unranked

8 citations

Jonathan P. Ling, Jian Zhang, Eric Helmenstine, Wencke Walter, Panagiotis Tsakiroglou +19 more

Splicing dysregulation in glioblastoma alters the function of cell migration‐related genes

Glia(2024)10.1002/glia.24630

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0DataRank · unranked

6 citations

Pedro Bak‐Gordon, Zhaoqi Liu, Peter Canoll, James L. Manley, Minu Seong

WDR33 alternative polyadenylation is dependent on stochastic poly(a) site usage and splicing efficiencies

RNA Biology(2024)10.1080/15476286.2024.2408708

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0DataRank · unranked

2 citations

Takahiro Seimiya, James L. Manley, Lizhi Liu

Cancer-associated SF3B1 mutation K700E causes widespread changes in U2/branchpoint recognition without altering splicing

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.18.624191

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0DataRank · unranked

1 citations

Chia-Ho Lin, Jian Zhang, James L. Manley, Douglas L. Black, Andrey Damianov

SF3B1: from core splicing factor to oncogenic driver

RNA(2025)10.1261/rna.080368.124

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0DataRank · unranked

11 citations

James L. Manley, Pedro Bak‐Gordon

SUGP1 loss drives SF3B1 hotspot mutant missplicing in cancer

Cell Reports(2025)10.1016/j.celrep.2025.116075

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0DataRank · unranked

5 citations

Pedro Bak‐Gordon, Jindou Xie, Jian Zhang, Zhaoqi Liu, James L. Manley +1 more

Protocol for detection of cGAMP-induced STING oligomerization in cultured cells

STAR Protocols(2025)10.1016/j.xpro.2025.103709

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0DataRank · unranked

4 citations

James L. Manley, Lizhi Liu

Multiple human enhancer RNAs contain long translated open reading frames

Genes & Development(2025)10.1101/gad.352944.125

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0DataRank · unranked

4 citations

Koichi Ogami, Elizabeth Valenzuela, Risa Karakida Kawaguchi, Marko Jovanović, James L. Manley +1 more

Multiple human enhancer RNAs contain long translated open reading frames

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.18.649583

N/A

0DataRank · unranked

0 citations

Koichi Ogami, Elizabeth Valenzuela, Risa Karakida Kawaguchi, Marko Jovanović, James L. Manley +1 more

Widespread transcript shortening through alternative polyadenylation in secretory cell differentiation

Nature Communications(2020)10.1038/s41467-020-16959-2

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0DataRank · unranked

65 citations

Dinghai Zheng, Erdene Baljinnyam, Fangzheng Sun, Koichi Ogami, Percy Luk Yeung +5 more