Robyn M. Kaake

Also affiliated with Gladstone Institutes, University of California, San Francisco, Quantitative BioSciences

ChemistryBiochemistry, Genetics and Molecular BiologyImmunology and MicrobiologyMedicineComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 26 papers. Top paper: “A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Potential Drug-Repurposing”.

A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Potential Drug-Repurposing

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.22.002386

N/A

14.3DataRank · unranked

456 citations

Gwendolyn M. Jang, Mehdi Bouhaddou, Jiewei Xu, Kirsten Obernier, Matthew J. O’Meara +95 more

The Global Phosphorylation Landscape of SARS-CoV-2 Infection

Cell(2020)10.1016/j.cell.2020.06.034

N/A

10.3DataRank · unranked

1152 citations

Danish Memon, Bjoern Meyer, Kris M. White, Veronica V. Rezelj, Miguel Correa Marrero +73 more

Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms

Science(2020)10.1126/science.abe9403

N/A

9.5DataRank · unranked

816 citations

Joseph Hiatt, Mehdi Bouhaddou, Veronica V. Rezelj, Svenja Ulferts, Hannes Braberg +95 more

Structural basis of CD4 downregulation by HIV-1 Nef

Nature Structural & Molecular Biology(2020)10.1038/s41594-020-0463-z

N/A

1.6DataRank · unranked

66 citations

Robyn M. Kaake, Ignacia Echeverria, Marissa Suarez, Mohammad Karimian Shamsabadi, Charlotte A. Stoneham +8 more

Proteomic Approaches to Study SARS-CoV-2 Biology and COVID-19 Pathology

Journal of Proteome Research(2021)10.1021/acs.jproteome.0c00764

N/A

1.4DataRank · unranked

38 citations

Monita Muralidharan, Nevan J. Krogan, Robyn M. Kaake, Ruth Hüttenhain, Paige Haas

A SARS-CoV-2 protein interaction map reveals targets for drug repurposing

Nature(2020)10.1038/s41586-020-2286-9

N/A

1.3DataRank · unranked

4829 citations

Gwendolyn M. Jang, Mehdi Bouhaddou, Jiewei Xu, Kirsten Obernier, Kris M. White +95 more

Proteomic and genetic analyses of influenza A viruses identify pan-viral host targets

Nature Communications(2023)10.1038/s41467-023-41442-z

N/A

1.2DataRank · unranked

62 citations

Michael McGregor, Mehdi Bouhaddou, Benjamin J. Polacco, Eun‐Young Kim, Thông Nguyen +50 more

Systems-level effects of allosteric perturbations to a model molecular switch

Nature(2021)10.1038/s41586-021-03982-6

N/A

0.972DataRank · unranked

26 citations

Christopher J.P. Mathy, Jiewei Xu, Gwendolyn M. Jang, Yang Zhang, Robyn M. Kaake +8 more

CRISPR-Cas9 screen of E3 ubiquitin ligases identifies TRAF2 and UHRF1 as regulators of HIV latency in primary human T cells

mBio(2024)10.1128/mbio.02222-23

N/A

0.351DataRank · unranked

8 citations

Paige Haas, Vigneshwari Easwar Kumar, Joseph Hiatt, Kelsey M. Haas, Mehdi Bouhaddou +16 more

Protein interaction map of APOBEC3 enzyme family reveals deamination-independent role in cellular function

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.06.579137

N/A

0.225DataRank · unranked

3 citations

Arun Kumar Annan Sudarsan, Arzhang Shayeganmehr, Érika Prando Munhoz, R. Lao, Amit Gaba +8 more

Protein Interaction Map of APOBEC3 Enzyme Family Reveals Deamination-Independent Role in Cellular Function

Molecular & Cellular Proteomics(2024)10.1016/j.mcpro.2024.100755

N/A

0DataRank · unranked

15 citations

Arun Kumar Annan Sudarsan, Arzhang Shayeganmehr, Érika Prando Munhoz, R. Lao, Amit Gaba +8 more

Protocol for mapping differential protein-protein interaction networks using affinity purification-mass spectrometry

STAR Protocols(2024)10.1016/j.xpro.2024.103286

N/A

0DataRank · unranked

2 citations

Manisha R. Ummadi, Gwendolyn M. Jang, Yennifer Delgado, Sara K. Makanani, Kareem Alba +13 more

Mapping Differential Protein-Protein Interaction Networks using Affinity Purification Mass Spectrometry

PubMed(2024)10.48550/arxiv.2405.09699

N/A

0DataRank · unranked

0 citations

Manisha R. Ummadi, Gwendolyn M. Jang, Yennifer Delgado, Sara K. Makanani, Sophie F. Blanc +12 more

Old World alphaviruses use distinct mechanisms to infect brain microvascular endothelial cells for neuroinvasion

Cell Reports(2025)10.1016/j.celrep.2025.116305

N/A

0DataRank · unranked

6 citations

Ashley Tang, Doug Winters, Prashant Kaushal, Angélica Medina, Marta Nieto +10 more

Mass Spectrometry‐Based Proteomics Technologies to Define Endogenous Protein‐Protein Interactions and Their Applications to Cancer and Viral Infectious Diseases

Mass Spectrometry Reviews(2025)10.1002/mas.21926

N/A

0DataRank · unranked

5 citations

Rithika Adavikolanu, Robyn M. Kaake, Lan Huang, Clinton Yu

Integrative multi-omics analysis in vivo identifies influenza virus host factors

iScience(2025)10.1016/j.isci.2025.113644

N/A

0DataRank · unranked

3 citations

Benjamin J. Polacco, Manon Eckhardt, Max W. Chang, Carles Martínez‐Romero, Kayla Adkins-Travis +29 more

The Chlamydia effector Dre1 binds dynactin to reposition host organelles during infection

Cell Reports(2025)10.1016/j.celrep.2025.115509

N/A

0DataRank · unranked

0 citations

Komal Ishwar Pawar, Lee Dolat, Erin P. Smith, I-Chang Chang, Khavong Pha +12 more

Hybrid Gene Origination Creates Human-Virus Chimeric Proteins during Infection

Cell(2020)10.1016/j.cell.2020.05.035

N/A

0DataRank · unranked

45 citations

Matthew Angel, Yixuan Ma, Elizabeth Sloan, Guojun Wang, Carles Martínez‐Romero +49 more

Structural Basis of CD4 Downregulation by HIV-1 Nef

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.21.054007

N/A

0DataRank · unranked

3 citations

Robyn M. Kaake, Ignacia Echeverria, Marissa Suarez, Charlotte A. Stoneham, Peter W. Ramirez +7 more

Biophysical basis of cellular multi-specificity encoded in a model molecular switch

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.04.893909

N/A

0DataRank · unranked

0 citations

Christopher J.P. Mathy, Jiewei Xu, Gwendolyn M. Jang, Yang Zhang, Robyn M. Kaake +8 more

Characterization of an A3G-VifHIV-1-CRL5-CBFβ Structure Using a Cross-linking Mass Spectrometry Pipeline for Integrative Modeling of Host–Pathogen Complexes

Molecular & Cellular Proteomics(2021)10.1016/j.mcpro.2021.100132

N/A

0DataRank · unranked

11 citations

Ignacia Echeverria, Seung Joong Kim, John Von Dollen, Nicholas M. Chesarino, Yuqing Feng +8 more

Functional analysis of a common BAG3 allele associated with protection from heart failure

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.06.463213

N/A

0DataRank · unranked

2 citations

Luke M. Judge, Christina L Jensen, Kenneth Wu, Annie Truong, Jaclyn J. Ho +11 more

From systems to structure — using genetic data to model protein structures

Nature Reviews Genetics(2022)10.1038/s41576-021-00441-w

N/A

0DataRank · unranked

34 citations

Ignacia Echeverria, Robyn M. Kaake, Andrej Săli, Nevan J. Krogan, Hannes Braberg

De novo protein identification in mammalian sperm using high-resolution in situ cryo-electron tomography

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.28.510016

N/A

0DataRank · unranked

4 citations

Momoko Shiozaki, Kelsey M. Haas, Shumei Zhao, Caiying Guo, Benjamin J. Polacco +6 more

De novo protein identification in mammalian sperm using in situ cryoelectron tomography and AlphaFold2 docking

Cell(2023)10.1016/j.cell.2023.09.017

N/A

0DataRank · unranked

81 citations

Momoko Shiozaki, Kelsey M. Haas, Will M. Skinner, Shumei Zhao, Caiying Guo +8 more

Functional analysis of a common BAG3 allele associated with protection from heart failure

Nature Cardiovascular Research(2023)10.1038/s44161-023-00288-w

N/A

0DataRank · unranked

10 citations

Luke M. Judge, Christina L Jensen, Kenneth Wu, Hannah L. Watry, Annie Truong +11 more