Daniel B. Graham

Also affiliated with Massachusetts General Hospital, Center for Systems Biology, Klarman Cell Observatory

Biochemistry, Genetics and Molecular BiologyImmunology and MicrobiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.2Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Human Cell Atlas White Paper

arXiv (Cornell University)(2018)10.17863/cam.40032

Top 10%

2.2DataRank

Top 10%41 citations

Sarah A. Teichmann, Orit Rozenblatt‐Rosen, Michael J. T. Stubbington, Kristin G. Ardlie, Ido Amit +76 more

Papers

Driven by 48 papers — median percentile 90. Top paper: “QRICH1 dictates the outcome of ER stress through transcriptional control of proteostasis”.

QRICH1 dictates the outcome of ER stress through transcriptional control of proteostasis

Science(2021)10.1126/science.abb6896

N/A

4.1DataRank · unranked

149 citations

Lingfei Wang, Chih-Hung Chou, Kai Liu, Toru Nakata, Alok Jaiswal +9 more

B cell genomics behind cross-neutralization of SARS-CoV-2 variants and SARS-CoV

Cell(2021)10.1016/j.cell.2021.04.032

N/A

2.9DataRank · unranked

100 citations

Christopher O. Barnes, Basak Eraslan, Andrew Hudak, Jennifer R. Keeffe, Lisa A. Cosimi +34 more

Colon stroma mediates an inflammation-driven fibroblastic response controlling matrix remodeling and healing

PLOS Biology(2022)10.1371/journal.pbio.3001532

N/A

2.7DataRank · unranked

107 citations

Alok Jaiswal, Mukund Varma, Tyler Laszewski, Angelo Grauel, Abdifatah S. Omar +11 more

The Human Cell Atlas White Paper

arXiv (Cornell University)(2018)10.17863/cam.40032

Top 10%

2.2DataRank

Top 10%41 citations

Sarah A. Teichmann, Orit Rozenblatt‐Rosen, Michael J. T. Stubbington, Kristin G. Ardlie, Ido Amit +76 more

Conditioning of the immune system by the microbiome

Trends in Immunology(2023)10.1016/j.it.2023.05.002

N/A

1.9DataRank · unranked

91 citations

Ramnik J. Xavier, Daniel B. Graham

An esophagus cell atlas reveals dynamic rewiring during active eosinophilic esophagitis and remission

Nature Communications(2024)10.1038/s41467-024-47647-0

N/A

1.3DataRank · unranked

57 citations

John J. Garber, Amiko Uchida, Ariel Lefkovith, Grace T. Carter, Praveen Vimalathas +14 more

CRISPR-Cas9 Knockin Mice for Genome Editing and Cancer Modeling

Cell(2014)10.1016/j.cell.2014.09.014

N/A

1.1DataRank · unranked

2034 citations

Sidi Chen, Yang Zhou, Michael J. Yim, Lukasz Swiech, Hannah R. Kempton +17 more

Rewiring of the cellular and inter-cellular landscape of the human colon during ulcerative colitis

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/455451

N/A

1.1DataRank · unranked

19 citations

Moshe Biton, Keri M. Sullivan, Grace Burgin, Daniel B. Graham, Rebecca H. Herbst +24 more

Intra- and Inter-cellular Rewiring of the Human Colon during Ulcerative Colitis

Cell(2019)10.1016/j.cell.2019.06.029

N/A

1.1DataRank · unranked

1412 citations

Moshe Biton, Keri M. Sullivan, Grace Burgin, Daniel B. Graham, Rebecca H. Herbst +28 more

The Human and Mouse Enteric Nervous System at Single-Cell Resolution

Cell(2020)10.1016/j.cell.2020.08.003

N/A

0.948DataRank · unranked

556 citations

Christopher S. Smillie, Nicholas Van Wittenberghe, Maria Ericsson, Gabriel K. Griffin, David S. Fischer +14 more

Remodeling of colon plasma cell repertoire within ulcerative colitis patients

Journal of Experimental Medicine(2023)10.1084/jem.20220538

N/A

0.939DataRank · unranked

31 citations

Basak Eraslan, Andrew Hudak, Eric M. Brown, Dallis Sergio, Toni Marie Delorey +13 more

Spatially restricted immune and microbiota-driven adaptation of the gut

Nature(2024)10.1038/s41586-024-08216-z

N/A

0.911DataRank · unranked

41 citations

Chenhao Li, Åsa Segerstolpe, Eric M. Brown, Rebecca Weisberg, Toru Nakata +6 more

The enteric nervous system of the human and mouse colon at a single-cell resolution

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/746743

N/A

0.905DataRank · unranked

24 citations

Christopher S. Smillie, Nicholas Van Wittenberghe, Maria Ericsson, Gabriel K. Griffin, Danielle Dionne +11 more

SAC1 regulates autophagosomal phosphatidylinositol-4-phosphate for xenophagy-directed bacterial clearance

Cell Reports(2021)10.1016/j.celrep.2021.109434

N/A

0.883DataRank · unranked

24 citations

Lingjia Kong, Daniel B. Graham, Kimberly L. Carey, Ramnik J. Xavier, Kai Liu

Single-cell and spatial transcriptomics of stricturing Crohn’s disease highlights a fibrosis-associated network

Nature Genetics(2025)10.1038/s41588-025-02225-y

N/A

0.647DataRank · unranked

34 citations

Sathish Subramanian, Åsa Segerstolpe, Vy Anh Tran, Angela Shih, Grace T. Carter +19 more

Genetic vulnerability to Crohn’s disease reveals a spatially resolved epithelial restitution program

Science Translational Medicine(2023)10.1126/scitranslmed.adg5252

N/A

0.507DataRank · unranked

13 citations

Chenhao Li, Toufic Mayassi, Helen Lin, Koushik Ghosh, Åsa Segerstolpe +14 more

Sequencing of over 100,000 individuals identifies multiple genes and rare variants associated with Crohns disease susceptibility

medRxiv(2021)10.1101/2021.06.15.21258641

N/A

0.500DataRank · unranked

11 citations

Christine Stevens, Guhan Venkataraman, Kai Yuan, Brandon E. Avila, María T. Abreu +95 more

T helper cells modulate intestinal stem cell renewal and differentiation

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/217133

N/A

0.368DataRank · unranked

5 citations

Adam L. Haber, Semir Beyaz, Noga Rogel, Indresh Singh, Karthik Shekhar +26 more

Translational genetics identifies a phosphorylation switch in CARD9 required for innate inflammatory responses

Cell Reports(2024)10.1016/j.celrep.2024.113944

N/A

0.249DataRank · unranked

4 citations

Zhifang Cao, Chirag Krishna, Jennifer L. Reedy, Xiebin Gu, Richard A. Dutko +12 more

Functional analyses and single cell immunoprofiling uncover sex-specific differences in SARS-CoV2 immune memory development

Research Square(2022)10.21203/rs.3.rs-1416969/v1

N/A

0.104DataRank · unranked

1 citations

Eric M. Brown, Maura Benson, Liat Amir-Zilberstein, Sung‐Moo Park, Vladislav Pokatayev +23 more

The Ulcerative Colitis-Associated Gene NXPE1 Catalyzes Glycan Modifications on Colonic Mucin

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.24.630288

N/A

0DataRank · unranked

2 citations

Noriko Rapley, Xiebin Gu, Joon Soo An, Ashwin N. Ananthakrishnan, Elizabeth A. Creasey +6 more

Bacteroides sphingolipids promote anti-inflammatory responses through the mevalonate pathway

Cell Host & Microbe(2025)10.1016/j.chom.2025.05.007

N/A

0DataRank · unranked

23 citations

Emily R. Temple, Sarah Jeanfavre, Julián Ávila-Pacheco, Noël Taylor, Kai Liu +8 more

Development of an FKBP12-recruiting chemical-induced proximity DNA-encoded library and its application to discover an autophagy potentiator

Cell chemical biology(2025)10.1016/j.chembiol.2024.12.002

N/A

0DataRank · unranked

13 citations

Joel K.A. Adade, Xiebin Gu, Cody Hecht, Michael Salcius, Bingqi Tong +7 more

Unusual Phospholipids from Morganella morganii Linked to Depression

Journal of the American Chemical Society(2025)10.1021/jacs.4c15158

N/A

0DataRank · unranked

8 citations

Yern‐Hyerk Shin, Sung‐Moo Park, Lei Deng, R. Thomas Williamson, Daniel B. Graham +3 more

The Ulcerative Colitis-Associated Gene NXPE1 Catalyzes Glycan Modifications on Colonic Mucin

Journal of the American Chemical Society(2025)10.1021/jacs.5c00769

N/A

0DataRank · unranked

5 citations

Noriko Oshiro-Rapley, Xiebin Gu, Joon Soo An, Ashwin N. Ananthakrishnan, Elizabeth A. Creasey +6 more

Allosteric modulation of the solute carrier transporter SLC39A8 potentiates manganese and cadmium uptake

Journal of Clinical Investigation(2025)10.1172/jci191096

N/A

0DataRank · unranked

3 citations

Clara Moon, Alan D. Wickenden, Mark S. Tichenor, Ge Yunhui, Eduardo V. Mercado-Marin +9 more

Autoimmune disease risk gene ANKRD55 promotes TH17 effector function through metabolic modulation

The Journal of Experimental Medicine(2025)10.1084/jem.20250185

N/A

0DataRank · unranked

1 citations

Lingjia Kong, Elizabeth A. Creasey, Sneha Rath, Lei Deng, Julián Ávila-Pacheco +11 more

Correction to “Unusual Phospholipids from Morganella morganii Linked to Depression”

Journal of the American Chemical Society(2025)10.1021/jacs.5c05127

N/A

0DataRank · unranked

0 citations

Yern‐Hyerk Shin, Sung‐Moo Park, Lei Deng, R. Thomas Williamson, Daniel B. Graham +3 more

Nuclear receptor coregulator NRIP1 R448G modulates T cell gut homing to control intestinal inflammation

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2508269122

N/A

0DataRank · unranked

0 citations

Hee Seung Hwang, Bihua Li, Yanhua Zhao, Koushik Ghosh, Lei Deng +5 more

Prevalent cross-cell type QTL trans -regulatory genetic effects impacting innate lymphoid cells in the small intestine

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.16.649031

N/A

0DataRank · unranked

0 citations

Kirk Gosik, Yang Zang, Orr Ashenberg, Chenhao Li, Hongjun Li +14 more

Remodeling of human colon plasma cell repertoire in ulcerative colitis

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.14.480403

N/A

0DataRank · unranked

0 citations

Basak Eraslan, Andrew Hudak, Eric M. Brown, Dallis Sergio, Toni Marie Delorey +12 more

A missense variant in SLC39A8 confers risk for Crohn’s disease by disrupting manganese homeostasis and intestinal barrier integrity

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2014742117

N/A

0DataRank · unranked

55 citations

Elizabeth A. Creasey, Motohiko Kadoki, Helen Lin, Martin K. Selig, Junmei Yao +5 more

Cell Type– and Stimulation-Dependent Transcriptional Programs Regulated by Atg16L1 and Its Crohn's Disease Risk Variant T300A

The Journal of Immunology(2020)10.4049/jimmunol.1900750

N/A

0DataRank · unranked

7 citations

Motohiko Kadoki, Ariel Lefkovith, Kara L. Conway, Kevin MingJie Gao, Vishnu Mohanan +8 more

The schizophrenia-associated variant in SLC39A8 alters N-glycosylation in the mouse brain

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.22.424076

N/A

0DataRank · unranked

2 citations

Sarah Williams, Maxence Noël, Bo Yang, Alexandria K. D’Souza, Toru Nakata +10 more

Gut bacterial metabolites modulate endoplasmic reticulum stress

Genome biology(2021)10.1186/s13059-021-02496-8

N/A

0DataRank · unranked

47 citations

Kwontae You, Matthieu Pichaud, Henry J. Haiser, Daniel B. Graham, Hera Vlamakis +3 more

MS-Based HLA-II Peptidomics Combined With Multiomics Will Aid the Development of Future Immunotherapies

Molecular & Cellular Proteomics(2021)10.1016/j.mcpro.2021.100116

N/A

0DataRank · unranked

23 citations

Susan Klaeger, Karl R. Clauser, Siranush Sarkizova, Shira Weingarten-Gabbay, Daniel B. Graham +3 more

Akkermansia muciniphila phospholipid induces homeostatic immune responses

Nature(2022)10.1038/s41586-022-04985-7

N/A

0DataRank · unranked

398 citations

Chelsi D. Cassilly, Xiaoxi Liu, Sung‐Moo Park, Betsabeh Khoramian Tusi, Xiangjun Chen +10 more

Large-scale sequencing identifies multiple genes and rare variants associated with Crohn’s disease susceptibility

Nature Genetics(2022)10.1038/s41588-022-01156-2

N/A

0DataRank · unranked

192 citations

Christine Stevens, Guhan Venkataraman, Kai Yuan, Brandon E. Avila, Maria T. Abreu +95 more

pH sensing controls tissue inflammation by modulating cellular metabolism and endo-lysosomal function of immune cells

Nature Immunology(2022)10.1038/s41590-022-01231-0

N/A

0DataRank · unranked

76 citations

Alok Jaiswal, Zachary A. Costliow, Paula Herbst, Elizabeth A. Creasey, Noriko Oshiro-Rapley +5 more

The CD4+ T cell response to a commensal-derived epitope transitions from a tolerant to an inflammatory state in Crohn’s disease

Immunity(2022)10.1016/j.immuni.2022.08.016

N/A

0DataRank · unranked

58 citations

Eric M. Brown, Damian R. Plichta, Joachim Johansen, Shaina W. Twardus, Toni Marie Delorey +6 more

The landscape of immune dysregulation in Crohn’s disease revealed through single-cell transcriptomic profiling in the ileum and colon

Immunity(2023)10.1016/j.immuni.2023.01.002

N/A

0DataRank · unranked

269 citations

Vladislav Pokatayev, Ariel Lefkovith, Grace T. Carter, Elizabeth A. Creasey, Chirag Krishna +9 more

A Cardiolipin from Muribaculum intestinale Induces Antigen-Specific Cytokine Responses

Journal of the American Chemical Society(2023)10.1021/jacs.3c09734

N/A

0DataRank · unranked

53 citations

Yern‐Hyerk Shin, Xiao Ma, Sung‐Moo Park, Daniel B. Graham, Ramnik J. Xavier +2 more

HLA-II immunopeptidome profiling and deep learning reveal features of antigenicity to inform antigen discovery

Immunity(2023)10.1016/j.immuni.2023.05.009

N/A

0DataRank · unranked

52 citations

Jihye Park, Jennifer G. Abelin, Hannah Taylor, Thomas K. Pedersen, Damian R. Plichta +9 more

Constitutively active autophagy in macrophages dampens inflammation through metabolic and post-transcriptional regulation of cytokine production

Cell Reports(2023)10.1016/j.celrep.2023.112708

N/A

0DataRank · unranked

36 citations

Lingjia Kong, Blayne A. Oliver, Bihua Li, Elizabeth A. Creasey, Gaelen Guzman +7 more

Revisiting Coley’s Toxins: Immunogenic Cardiolipins from Streptococcus pyogenes

Journal of the American Chemical Society(2023)10.1021/jacs.3c07727

N/A

0DataRank · unranked

18 citations

Sunghee Bang, Sung‐Moo Park, Xiao Ma, Chelsi D. Cassilly, Daniel B. Graham +3 more

Identification of host regulators of Mycobacterium tuberculosis phenotypes uncovers a role for the MMGT1-GPR156 lipid droplet axis in persistence

Cell Host & Microbe(2023)10.1016/j.chom.2023.05.009

N/A

0DataRank · unranked

15 citations

Chih-Hung Chou, Motohiko Kadoki, Daniel B. Graham, Jacques Deguine, Deborah T. Hung +2 more

Protein Language Models Uncover Carbohydrate-Active Enzyme Function in Metagenomics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.23.563620

N/A

0DataRank · unranked

7 citations

Ahmed M. Mohamed, Daniel B. Graham, Róisı́n M. Owens, Sabina Leanti La Rosa, Damian R. Plichta +3 more

Small-molecule probe for IBD risk variant GPR65 I231L alters cytokine signaling networks through positive allosteric modulation

Science Advances(2024)10.1126/sciadv.adn2339

N/A

0DataRank · unranked

8 citations

C. Subba Reddy, Zher Yin Tan, Bihua Li, Partha P. Nag, Joshua Park +5 more

Daniel B. Graham

Indexed papers

Top data-sharing exemplar

Papers