Irina Artsimovitch

Biochemistry, Genetics and Molecular BiologyEnvironmental Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 39 papers. Top paper: “Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase ρ”.

Steps toward translocation-independent RNA polymerase inactivation by terminator ATPase ρ

Science(2020)10.1126/science.abd1673

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0DataRank · unranked

121 citations

Tarek Hilal, Nicholas D. Sunday, Ajay Khatri, Jörg Bürger, Thorsten Mielke +6 more

The δ subunit and NTPase HelD institute a two-pronged mechanism for RNA polymerase recycling

Nature Communications(2020)10.1038/s41467-020-20159-3

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0DataRank · unranked

52 citations

Tarek Hilal, Zhuo A. Chen, Yongheng Huang, Yuan Gao, Nelly Said +6 more

Benzyl and benzoyl benzoic acid inhibitors of bacterial RNA polymerase-sigma factor interaction

European Journal of Medicinal Chemistry(2020)10.1016/j.ejmech.2020.112671

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18 citations

Adrian Jun Chu, Lin Lin, Shu Ting Chan, R.J. Harper, Min Xiao +5 more

A Growing Gap between the RNAP and the Lead Ribosome

Trends in Microbiology(2020)10.1016/j.tim.2020.09.011

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7 citations

Irina Artsimovitch, Bing Wang

An energy charge sensor for balancing RNA polymerase recycling and hibernation

Research Square(2020)10.21203/rs.3.rs-40617/v1

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1 citations

Hao-Hong Pei, Tarek Hilal, Zhuo Chen, Yongheng Huang, Yuan Gao +6 more

A translational riboswitch coordinates nascent transcription–translation coupling

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2023426118

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64 citations

Adrien Chauvier, Shiba S. Dandpat, Irina Artsimovitch, Nils G. Walter, Surajit Chatterjee

NusG, an Ancient Yet Rapidly Evolving Transcription Factor

Frontiers in Microbiology(2021)10.3389/fmicb.2020.619618

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53 citations

Irina Artsimovitch, Bing Wang

NMPylation and de-NMPylation of SARS-CoV-2 nsp9 by the NiRAN domain

Nucleic Acids Research(2021)10.1093/nar/gkab677

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54 citations

Dmitri Svetlov, Irina Artsimovitch, Bing Wang

Allosteric activation of SARS-CoV-2 RdRp by remdesivir triphosphate and other phosphorylated nucleotides

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.24.428004

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5 citations

Vladimir Svetlov, Yuri I. Wolf, Eugene V. Koonin, Evgeny Nudler, Irina Artsimovitch +1 more

Positive supercoiling favors transcription elongation through lac repressor-mediated DNA loops

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.02.433568

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1 citations

Yan Yan, Irina Artsimovitch, David Dunlap, Laura Finzi, Wenxuan Xu

NMPylation and de-NMPylation of SARS-CoV-2 Nsp9 by the NiRAN domain

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.13.448258

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1 citations

Dmitri Svetlov, Irina Artsimovitch, Bing Wang

High-throughput single-molecule experiments reveal heterogeneity, state switching, and three interconnected pause states in transcription

Cell Reports(2022)10.1016/j.celrep.2022.110749

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35 citations

Behrouz Eslami-Mossallam, Irina Artsimovitch, Martin Depken, Nynke H. Dekker, Richard Janissen

Metamorphic proteins under a computational microscope: Lessons from a fold-switching RfaH protein

Computational and Structural Biotechnology Journal(2022)10.1016/j.csbj.2022.10.024

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22 citations

César A. Ramírez‐Sarmiento, Irina Artsimovitch

Positive supercoiling favors transcription elongation through lac repressor-mediated DNA loops

Nucleic Acids Research(2022)10.1093/nar/gkac093

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12 citations

Yan Yan, Irina Artsimovitch, David Dunlap, Laura Finzi, Wenxuan Xu

A non‐native C‐terminal extension of the β’ subunit compromises RNA polymerase and Rho functions

Molecular Microbiology(2022)10.1111/mmi.14879

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1 citations

Bing Wang, Nelly Said, Daniela Gjorgjevikj, M.C. Wahl, Irina Artsimovitch +1 more

Allosteric couplings upon binding of RfaH to transcription elongation complexes

Nucleic Acids Research(2022)10.1093/nar/gkac453

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5 citations

Pablo Galaz‐Davison, Elizabeth A. Komives, Irina Artsimovitch, César A. Ramírez‐Sarmiento, José Alejandro Molina

Modulation of RNA polymerase processivity affects double-strand break repair in the presence of a DNA end-binding protein

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.08.479637

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0DataRank · unranked

0 citations

Catherine C. Bradley, Irina Artsimovitch, Katelin M. Hagstrom, Laura Deus Ramirez, Alice X Wen +5 more

Machine Learning Suggests That Small Size Helps Broaden Plasmid Host Range

Genes(2023)10.3390/genes14112044

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4 citations

Mark Finazzo, Irina Artsimovitch, Bing Wang

A structural analysis of the nsp9 protein from the coronavirus MERS CoV reveals a conserved RNA binding interface

Proteins Structure Function and Bioinformatics(2023)10.1002/prot.26630

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1 citations

Serene El‐Kamand, Bing Wang, David L. Baker, Sandro F. Ataide, Irina Artsimovitch +3 more

Concerted transformation of a hyper-paused transcription complex and its reinforcing protein

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.26.546588

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4 citations

Nelly Said, Tarek Hilal, Bing Wang, Bernhard Loll, Jorge González-Higueras +6 more

Widespread gene regulator Psu inhibits transcription termination factor ρ by forced hyper-oligomerization

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.22.546067

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2 citations

Naveen Kumar, Bing Wang, Tarek Hilal, Nelly Said, Bernhard Loll +4 more

Transcription termination factor ρ polymerizes under stress

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.18.553922

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0DataRank · unranked

2 citations

Nelly Said, Tarek Hilal, Mark Finazzo, M.C. Wahl, Irina Artsimovitch +1 more

Sm-like protein Rof inhibits transcription termination factor ρ by binding site obstruction and conformational insulation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.30.555460

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2 citations

Mark Finazzo, Tarek Hilal, Bing Wang, Tim Luca Selinger, Daniela Gjorgjevikj +3 more

Reciprocating RNA Polymerase batters through roadblocks

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.04.522798

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1 citations

Allison Cartee, Wenxuan Xu, Yan Yan, Bing Wang, Irina Artsimovitch +3 more

Force and the α -C-terminal domains bias RNA polymerase recycling

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.02.565415

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0DataRank · unranked

0 citations

Bing Wang, Irina Artsimovitch, David Dunlap, Laura Finzi, Jin Qian

Metamorphic proteins and how to find them

Current Opinion in Structural Biology(2024)10.1016/j.sbi.2024.102807

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25 citations

Irina Artsimovitch, César A. Ramírez‐Sarmiento, Lauren L. Porter

Concerted transformation of a hyper-paused transcription complex and its reinforcing protein

Nature Communications(2024)10.1038/s41467-024-47368-4

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0DataRank · unranked

21 citations

Nelly Said, Tarek Hilal, Bing Wang, Bernhard Loll, Jorge González-Higueras +6 more

Sm-like protein Rof inhibits transcription termination factor ρ by binding site obstruction and conformational insulation

Nature Communications(2024)10.1038/s41467-024-47439-6

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0DataRank · unranked

12 citations

Mark Finazzo, Tarek Hilal, Bing Wang, Tim Luca Selinger, Daniela Gjorgjevikj +3 more

Reciprocating RNA Polymerase batters through roadblocks

Nature Communications(2024)10.1038/s41467-024-47531-x

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0DataRank · unranked

6 citations

Allison Cartee, Wenxuan Xu, Yan Yan, Bing Wang, Irina Artsimovitch +3 more

Force and the α-C-terminal domains bias RNA polymerase recycling

Nature Communications(2024)10.1038/s41467-024-51603-3

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0DataRank · unranked

5 citations

Bing Wang, Irina Artsimovitch, David Dunlap, Laura Finzi, Jin Qian

A Biochemical and Biophysical Analysis of the Interaction of nsp9 with nsp12 from SARS‐CoV ‐2—Implications for Future Drug Discovery Efforts

Proteins Structure Function and Bioinformatics(2024)10.1002/prot.26725

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1 citations

Bing Wang, Lorna Wilkinson‐White, Serene El‐Kamand, Thomas A. Allport, Sandro F. Ataide +5 more

Antiterminator LoaP loads onto RNA to chase a runaway RNA polymerase

Structure(2024)10.1016/j.str.2024.07.024

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0DataRank · unranked

0 citations

Irina Artsimovitch, Bing Wang

Nucleotide-induced hyper-oligomerization inactivates transcription termination factor ρ

Nature Communications(2025)10.1038/s41467-025-56824-8

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0DataRank · unranked

11 citations

Nelly Said, Tarek Hilal, Mark Finazzo, M.C. Wahl, Irina Artsimovitch +1 more

The Psu protein of phage satellite P4 inhibits transcription termination factor ρ by forced hyper-oligomerization

Nature Communications(2025)10.1038/s41467-025-55897-9

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0DataRank · unranked

9 citations

Naveen Kumar, Bing Wang, Tarek Hilal, Nelly Said, Bernhard Loll +4 more

Endogenous DNA damage at sites of terminated transcripts

Nature(2025)10.1038/s41586-024-08578-4

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0DataRank · unranked

9 citations

Jullian Perren, Cody M. Rogers, Sadeieh Nimer, Alice X Wen, Jennifer A. Halliday +17 more

A post-assembly conformational change makes the SARS-CoV-2 polymerase elongation-competent

Nucleic Acids Research(2025)10.1093/nar/gkaf450

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4 citations

Arnab Das, Subhas Chandra Bera, Thomas K. Anderson, Dana Kocíncová, Hery W. Lee +12 more

Computational and experimental assessment of key interdomain residues controlling the fold‐switch of RfaH

Protein Science(2025)10.1002/pro.70202

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2 citations

Javiera Reyes, Irina Artsimovitch, César A. Ramírez‐Sarmiento, Cyndi Tabilo‐Agurto

A post-assembly conformational change makes the SARS-CoV-2 polymerase elongation-competent

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.10.632299

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0DataRank · unranked

1 citations

Arnab Das, Subhas Chandra Bera, Thomas K. Anderson, Dana Kocíncová, Hery W. Lee +12 more

Template switching by coronavirus polymerase requires helicase activity and is stimulated by remdesivir and molnupiravir

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.10.03.680419

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0DataRank · unranked

0 citations

Arnab Das, Subhas Chandra Bera, Pim P. B. America, Misha Klein, Thomas K. Anderson +14 more