Bo Li

Also affiliated with Soochow University, Affiliated Hospital of Southwest Medical University, Ansteel (China), Shanghai Institute of Materia Medica, University of Pennsylvania, Philadelphia University

MedicineImmunology and MicrobiologyBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.2Author DataRank

Indexed papers

6in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Comprehensive Characterizations of Immune Receptor Repertoire in Tumors and Cancer Immunotherapy Studies

Cancer Immunology Research(2022)10.1158/2326-6066.cir-21-0965

Top 17%

1.2DataRank

Top 17%29 citations

Zhangyi Ouyang, David Cohen, Yang Cao, Jennifer Altreuter, Gali Bai +7 more

Papers

Driven by 36 papers — median percentile 0. Top paper: “Blood and immune development in human fetal bone marrow and Down syndrome”.

Blood and immune development in human fetal bone marrow and Down syndrome

Nature(2021)10.1038/s41586-021-03929-x

N/A

3.2DataRank · unranked

160 citations

Simone Webb, Issac Goh, Mariana Quiroga Londoño, Gary Reynolds, Michael Mather +60 more

A single-cell and single-nucleus RNA-seq toolbox for fresh and frozen human tumors

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/761429

N/A

2.5DataRank · unranked

68 citations

Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro, Indresh Singh +44 more

Multiplexed, image-based pooled screens in primary cells and tissues with PerturbView

Nature Biotechnology(2024)10.1038/s41587-024-02391-0

N/A

1.8DataRank · unranked

54 citations

Ana M. Meireles, Reuben Moncada, Yushu Chen, Ping Wu, Joshua Gould +38 more

Thousands of novel unannotated proteins expand the MHC I immunopeptidome in cancer

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.12.945840

N/A

1.7DataRank · unranked

45 citations

Travis Law, Karl R. Clauser, Susan Klaeger, Siranush Sarkizova, François Aguet +22 more

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

BMC Bioinformatics(2011)10.1186/1471-2105-12-323

N/A

1.5DataRank · unranked

23145 citations

Gloria Despacio-Reyes, Bo Li

SpatialAgent: An autonomous AI agent for spatial biology

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.03.646459

N/A

1.5DataRank · unranked

47 citations

Yichun He, Paula P. Coelho, Matthew Bucci, Abbas Nazir, Bob Chen +35 more

TIMER: A Web Server for Comprehensive Analysis of Tumor-Infiltrating Immune Cells

Cancer Research(2017)10.1158/0008-5472.can-17-0307

N/A

1.3DataRank · unranked

6536 citations

Jingyu Fan, Binbin Wang, Nicole Traugh, Qianming Chen, Jialiang Yang +4 more

TIMER2.0 for analysis of tumor-infiltrating immune cells

Nucleic Acids Research(2020)10.1093/nar/gkaa407

N/A

1.3DataRank · unranked

5563 citations

Jingxin Fu, Zexian Zeng, David Cohen, Jing Li, Qianming Chen +3 more

Comprehensive Characterizations of Immune Receptor Repertoire in Tumors and Cancer Immunotherapy Studies

Cancer Immunology Research(2022)10.1158/2326-6066.cir-21-0965

Top 17%

1.2DataRank

Top 17%29 citations

Zhangyi Ouyang, David Cohen, Yang Cao, Jennifer Altreuter, Gali Bai +7 more

Unannotated proteins expand the MHC-I-restricted immunopeptidome in cancer

Nature Biotechnology(2021)10.1038/s41587-021-01021-3

N/A

0.853DataRank · unranked

294 citations

Travis Law, Karl R. Clauser, Susan Klaeger, Siranush Sarkizova, François Aguet +24 more

STAR-Fusion: Fast and Accurate Fusion Transcript Detection from RNA-Seq

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/120295

N/A

0.852DataRank · unranked

292 citations

Nicolas Stransky, Bo Li, Xiao Yang, Asma Bankapur, Carrie Ganote +10 more

Cumulus provides cloud-based data analysis for large-scale single-cell and single-nucleus RNA-seq

Nature Methods(2020)10.1038/s41592-020-0905-x

N/A

0.837DataRank · unranked

264 citations

Joshua Gould, Yiming Yang, Siranush Sarkizova, Marcin Tabaka, Orr Ashenberg +9 more

Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

Nature Communications(2019)10.1038/s41467-019-10756-2

N/A

0.803DataRank · unranked

211 citations

Bo Li, Cristin McCabe, Abigail Knecht, Yiming Yang, Eugene Drokhlyansky +11 more

Highly multiplexed, image-based pooled screens in primary cells and tissues with PerturbView

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.26.573143

N/A

0.641DataRank · unranked

11 citations

Ana M. Meireles, Reuben Moncada, Yushu Chen, Ping Wu, Joshua Gould +31 more

T1K: efficient and accurate KIR and HLA genotyping with next-generation sequencing data

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.26.513955

N/A

0.397DataRank · unranked

6 citations

Gali Bai, X. Shirley Liu, Bo Li, Alexandra P. Lewis, Li Song

Decoding the development of the blood and immune systems during human fetal liver haematopoiesis

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/654210

N/A

0.296DataRank · unranked

5 citations

Rachel A. Botting, Emily Stephenson, Kile Green, Laura Jardine, Emily F. Calderbank +54 more

Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

bioRxiv (Cold Spring Harbor Laboratory)(2018)10.1101/476036

N/A

0.208DataRank · unranked

3 citations

Bo Li, Cristin McCabe, Abigail Knecht, Eugene Drokhlyansky, Nicholas Van Wittenberghe +10 more

Genetic predisposition to myeloproliferative neoplasms implicates hematopoietic stem cell biology

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/790626

N/A

0.188DataRank · unranked

2 citations

Satish K. Nandakumar, Xiaotian Liao, Alexander G. Bick, Christel M. Middeldorp, Marcin Tabaka +30 more

A PoleP286R mouse model of endometrial cancer recapitulates high mutational burden and immunotherapy response

JCI Insight(2020)10.1172/jci.insight.138829

N/A

0DataRank · unranked

40 citations

Changzheng Lu, He Zhang, Qing Hu, Junqiu Zhang, Ileana Cuevas +13 more

AutoCAT: automated cancer-associated TCRs discovery from TCR-seq data

Bioinformatics(2021)10.1093/bioinformatics/btab661

N/A

0DataRank · unranked

10 citations

Bo Li, Christina S.F. Wong

Lactate Increases Stemness of CD8 + T Cells to Augment Anti-Tumor Immunity

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.18.464724

N/A

0DataRank · unranked

0 citations

Zhida Liu, Xuexin Yu, Tongyi Huang, Jiahui Chen, Jian Wang +10 more

Lactate increases stemness of CD8 + T cells to augment anti-tumor immunity

Nature Communications(2022)10.1038/s41467-022-32521-8

N/A

0DataRank · unranked

408 citations

Zhida Liu, Xuexin Yu, Tongyi Huang, Jiahui Chen, Jian Wang +10 more

Ectopic JAK–STAT activation enables the transition to a stem-like and multilineage state conferring AR-targeted therapy resistance

Nature Cancer(2022)10.1038/s43018-022-00431-9

N/A

0DataRank · unranked

152 citations

Choushi Wang, Yunguan Wang, Yaru Xu, Xiaoling Li, Nickolas A. Johnson +21 more

Analysis of KIR gene variants in The Cancer Genome Atlas and UK Biobank using KIRCLE

BMC Biology(2022)10.1186/s12915-022-01392-2

N/A

0DataRank · unranked

7 citations

Dajiang J. Liu, Xiaowei Zhan, Bo Li, Galen F. Gao

Loss of SYNCRIP unleashes APOBEC-driven mutagenesis, tumor heterogeneity, and AR-targeted therapy resistance in prostate cancer

Cancer Cell(2023)10.1016/j.ccell.2023.06.010

N/A

0DataRank · unranked

52 citations

Yunguan Wang, Su Deng, Guanghui Zhu, Choushi Wang, Nickolas A. Johnson +26 more

HLA Typing Prediction and Cross-Reactivity Network Mapping via HLA-Associated TCR Cluster Integration 2321

The Journal of Immunology(2025)10.1093/jimmun/vkaf283.248

N/A

0DataRank · unranked

0 citations

Bo Li, Mingyao Pan

Data from Comprehensive Characterizations of Immune Receptor Repertoire in Tumors and Cancer Immunotherapy Studies

(2023)10.1158/2326-6066.c.6550716.v1

Top 100%

0DataRank

Top 100%0 citations

Zhangyi Ouyang, David Cohen, Yang Cao, Jennifer Altreuter, Gali Bai +7 more

Author Correction: Nuclei multiplexing with barcoded antibodies for single-nucleus genomics

Nature Communications(2020)10.1038/s41467-020-19357-w

N/A

0DataRank · unranked

0 citations

Bo Li, Cristin McCabe, Abigail Knecht, Yiming Yang, Eugene Drokhlyansky +11 more

MOESM1 of Accuracy assessment of fusion transcript detection via read-mapping and de novo fusion transcript assembly-based methods

Figshare(2019)10.6084/m9.figshare.10022309

Top 100%

0DataRank

Top 100%0 citations

Alexander Dobin, Bo Li, Nicolas Stransky, Nathalie Pochet, Prisca Liberali +1 more

Supplementary Figure from Comprehensive Characterizations of Immune Receptor Repertoire in Tumors and Cancer Immunotherapy Studies

(2023)10.1158/2326-6066.22544670

N/A

0DataRank · unranked

0 citations

Zhangyi Ouyang, David Cohen, Yang Cao, Jennifer Altreuter, Gali Bai +7 more

Data from Comprehensive Characterizations of Immune Receptor Repertoire in Tumors and Cancer Immunotherapy Studies

(2023)10.1158/2326-6066.c.6550716

Top 100%

0DataRank

Top 100%0 citations

Zhangyi Ouyang, David Cohen, Yang Cao, Jennifer Altreuter, Gali Bai +7 more

Immune repertoires of de-identified TCGA tumor samples assembled by TRUST4

Zenodo (CERN European Organization for Nuclear Research)(2022)10.5281/zenodo.6326136

Top 100%

0DataRank

Top 100%0 citations

Zhangyi Ouyang, David Cohen, Yang Cao, Jennifer Altreuter, Gali Bai +7 more

Author Correction: Multiplexed, image-based pooled screens in primary cells and tissues with PerturbView

Nature Biotechnology(2025)10.1038/s41587-025-02602-2

N/A

0DataRank · unranked

0 citations

Ana M. Meireles, Reuben Moncada, Yushu Chen, Ping Wu, Joshua Gould +38 more

Whole-genome sequencing reveals Yunnan as the crossroads of East and Southeast Asia for human gene flow

Journal of Genetics and Genomics(2026)10.1016/j.jgg.2026.01.003

N/A

0DataRank · unranked

0 citations

Bo Li, Jianmei Liu, Yushan Huang, Wenxi Gu, Yuwen Zhou +14 more

Immune repertoires of de-identified TCGA tumor samples assembled by TRUST4

Zenodo (CERN European Organization for Nuclear Research)(2024)10.5281/zenodo.6326135

Top 100%

0DataRank

Top 100%0 citations

Zhangyi Ouyang, David Cohen, Yang Cao, Jennifer Altreuter, Gali Bai +7 more

DNA Sensing in Mismatch Repair-Deficient Tumor Cells Is Essential for Anti-tumor Immunity

Cancer Cell(2020)10.1016/j.ccell.2020.11.006

N/A

0DataRank · unranked

280 citations

Junhong Guan, Steve Lu, Qihuang Jin, Benoı̂t Rousseau, Tianshi Lu +21 more

Bo Li

Indexed papers

Top data-sharing exemplar

Papers