Subra Kugathasan

Biochemistry, Genetics and Molecular BiologyMedicineImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

6.7Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A structural variation reference for medical and population genetics

Nature(2020)10.1038/s41586-020-2287-8

Top 3%

6.7DataRank

Top 3%1180 citations

Harrison Brand, Konrad J. Karczewski, Xuefang Zhao, Jessica Alföldi, Laurent C. Francioli +201 more

Papers

Driven by 52 papers — median percentile 49. Top paper: “A structural variation reference for medical and population genetics”.

A structural variation reference for medical and population genetics

Nature(2020)10.1038/s41586-020-2287-8

Top 3%

6.7DataRank

Top 3%1180 citations

Harrison Brand, Konrad J. Karczewski, Xuefang Zhao, Jessica Alföldi, Laurent C. Francioli +201 more

Landscape of multi-nucleotide variants in 125,748 human exomes and 15,708 genomes

Nature Communications(2020)10.1038/s41467-019-12438-5

N/A

5.6DataRank · unranked

143 citations

James Zou, Beryl B. Cummings, Jessica Alföldi, Laurent C. Francioli, Laura D. Gauthier +174 more

Characterising the loss-of-function impact of 5’ untranslated region variants in 15,708 individuals

Nature Communications(2020)10.1038/s41467-019-10717-9

N/A

5.2DataRank · unranked

191 citations

Konrad J. Karczewski, Xiaolei Zhang, Sonia Chothani, Miriam J. Smith, D. Gareth Evans +181 more

The effect of LRRK2 loss-of-function variants in humans

Nature Medicine(2020)10.1038/s41591-020-0893-5

N/A

4.9DataRank · unranked

114 citations

Irina M. Armean, Aaron Kleinman, Jamie L. Marshall, Eric V. Minikel, Julia K. Goodrich +214 more

The mutational constraint spectrum quantified from variation in 141,456 humans

Nature(2020)10.1038/s41586-020-2308-7

N/A

1.4DataRank · unranked

9958 citations

Laurent C. Francioli, Grace Tiao, Beryl B. Cummings, Jessica Alföldi, Qingbo S. Wang +187 more

Transcript expression-aware annotation improves rare variant interpretation

Nature(2020)10.1038/s41586-020-2329-2

N/A

0.796DataRank · unranked

201 citations

Konrad J. Karczewski, Ditte Demontis, Eleanor G. Seaby, Nicholas A. Watts, Moriel Singer-Berk +177 more

Evaluating drug targets through human loss-of-function genetic variation

Nature(2020)10.1038/s41586-020-2267-z

N/A

0.779DataRank · unranked

179 citations

Konrad J. Karczewski, Hilary C. Martin, Beryl B. Cummings, Nicola Whiffin, Daniel R. Rhodes +150 more

Sequencing of over 100,000 individuals identifies multiple genes and rare variants associated with Crohns disease susceptibility

medRxiv(2021)10.1101/2021.06.15.21258641

N/A

0.500DataRank · unranked

11 citations

Christine Stevens, Guhan Venkataraman, Kai Yuan, Brandon E. Avila, María T. Abreu +95 more

Mucosal Inflammatory and Wound Healing Gene Programmes Reveal Targets for Stricturing Behaviour in Paediatric Crohn’s Disease

Journal of Crohn s and Colitis(2020)10.1093/ecco-jcc/jjaa166

N/A

0DataRank · unranked

31 citations

Phillip Minar, Rebekah Karns, Phillip J. Dexheimer, Sudhir Ghandikota, Samuel Tegge +39 more

Prediction of complicated disease course for children newly diagnosed with Crohn's disease: a multicentre inception cohort study

UNC Libraries(2020)10.17615/z68h-gy11

N/A

0DataRank · unranked

1 citations

Jonathan Evans, Francisco Sylvester, David J. Keljo, Joel R. Rosh, Wallace Crandall +38 more

Contribution of higher risk genes and European admixture to Crohnʼs disease in African Americans:

UNC Libraries(2020)10.17615/20am-7327

N/A

0DataRank · unranked

1 citations

Kim L. Isaacs, James D. Lewis, John D. Rioux, Yuqiong Wu, Toshihiko Okazaki +21 more

Reduced expression of COVID-19 host receptor, ACE2 is associated with small bowel inflammation, more severe disease, and response to anti-TNF therapy in Crohn’s disease

medRxiv(2020)10.1101/2020.04.19.20070995

N/A

0DataRank · unranked

25 citations

Shishir Dube, Takeo Naito, Gregory J. Botwin, Talin Haritunians, Dalin Li +11 more

Trans-ethnic analysis of the human leukocyte antigen region for ulcerative colitis reveals shared but also ethnicity-specific disease associations

medRxiv(2020)10.1101/2020.07.29.20162552

N/A

0DataRank · unranked

2 citations

Gabriele Mayr, Mareike Wendorff, Gabrielle Boucher, Eva Ellinghaus, David Ellinghaus +46 more

Profiling Non-Coding RNA Levels With Clinical Classifiers in Pediatric Crohn’s Disease

Research Square(2020)10.21203/rs.3.rs-88594/v1

N/A

0DataRank · unranked

1 citations

Suresh Venkateswaran, Jason D. Matthews, Yael Haberman, David J. Cutler, Jeffrey S. Hyams +3 more

Identifying novel high-impact rare disease-causing mutations, genes and pathways in exomes of Ashkenazi Jewish inflammatory bowel disease patients

medRxiv(2020)10.1101/2020.07.01.20143750

N/A

0DataRank · unranked

0 citations

Kyle Gettler, Mamta Giri, Dalin Li, Çiğdem Sevim Bayrak, Aayushee Jain +21 more

DUOX2 variants associate with preclinical disturbances in microbiota-immune homeostasis and increased inflammatory bowel disease risk

Journal of Clinical Investigation(2021)10.1172/jci141676

N/A

0DataRank · unranked

83 citations

Andrew T. Magis, Elisa Sheng, Matthew P. Conomos, Min Zhang, Lea S. Garzotto +15 more

Whole-genome sequencing of African Americans implicates differential genetic architecture in inflammatory bowel disease

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.02.001

N/A

0DataRank · unranked

44 citations

Sini Nagpal, Suresh Venkateswaran, David J. Cutler, David T. Okou, Talin Haritunians +53 more

Ileal Derived Organoids From Crohn’s Disease Patients Show Unique Transcriptomic and Secretomic Signatures

Cellular and Molecular Gastroenterology and Hepatology(2021)10.1016/j.jcmgh.2021.06.018

N/A

0DataRank · unranked

43 citations

Suresh Venkateswaran, Murugadas Anbazhagan, Vasantha L. Kolachala, Jarod Prince, Anne Dodd +8 more

Transethnic analysis of the human leukocyte antigen region for ulcerative colitis reveals not only shared but also ethnicity-specific disease associations

Human Molecular Genetics(2021)10.1093/hmg/ddab017

N/A

0DataRank · unranked

41 citations

Gabriele Mayr, Mareike Wendorff, Gabrielle Boucher, Eva Ellinghaus, David Ellinghaus +46 more

Site- and Taxa-Specific Disease-Associated Oral Microbial Structures Distinguish Inflammatory Bowel Diseases

Inflammatory Bowel Diseases(2021)10.1093/ibd/izab082

N/A

0DataRank · unranked

28 citations

Jordan Weitzner, Suresh Venkateswaran, Anne Dodd, Jarod Prince, Arjuna Karikaran +8 more

Profiling non-coding RNA levels with clinical classifiers in pediatric Crohn’s disease

BMC Medical Genomics(2021)10.1186/s12920-021-01041-7

N/A

0DataRank · unranked

25 citations

Suresh Venkateswaran, Jason D. Matthews, Yael Haberman, David J. Cutler, Jeffrey S. Hyams +3 more

Association of Baseline Luminal Narrowing With Ileal Microbial Shifts and Gene Expression Programs and Subsequent Transmural Healing in Pediatric Crohn Disease

Inflammatory Bowel Diseases(2021)10.1093/ibd/izaa339

N/A

0DataRank · unranked

16 citations

Nicholas J. Ollberding, Rebekah Karns, Yael Haberman, Adina Alazraki, David M. Hercules +21 more

Use of Patient-Reported Outcomes Measurement Information System Pediatric Measures as Clinical Trial Endpoints: Experience from a Multicenter Pragmatic Trial in Children with Crohn’s Disease

The Journal of Pediatrics(2021)10.1016/j.jpeds.2021.10.053

N/A

0DataRank · unranked

7 citations

Julia Schuchard, Adam C. Carle, Christopher B. Forrest, Michael D. Kappelman, Jeremy Adler +35 more

Trans-ancestry, Bayesian meta-analysis discovers 20 novel risk loci for inflammatory bowel disease in an African American, East Asian and European cohort

Human Molecular Genetics(2022)10.1093/hmg/ddac269

N/A

0DataRank · unranked

35 citations

Jennifer Buenaventura Cordero, Andrew B. Stiemke, Lisa W. Datta, Steven Buyske, Subra Kugathasan +4 more

Complexity of Secretory Chemokines in Human Intestinal Organoid Cultures Ex Vivo

Gastro Hep Advances(2022)10.1016/j.gastha.2022.02.009

N/A

0DataRank · unranked

7 citations

Murugadas Anbazhagan, Ariel Joy Lipat, Mital D. Patel, Amanda Paige Porter, Keenan Hogan +5 more

Progression of Pediatric Crohn’s Disease Is Associated With Anti–Tumor Necrosis Factor Timing and Body Mass Index Z-Score Normalization

Clinical Gastroenterology and Hepatology(2023)10.1016/j.cgh.2023.08.042

N/A

0DataRank · unranked

27 citations

David M. Hercules, Ranjit Pelia, Suresh Venkateswaran, Anne M. Griffiths, Joshua D. Noe +13 more

Identifying metabolic shifts in Crohn's disease using 'omics-driven contextualized computational metabolic network models

Scientific Reports(2023)10.1038/s41598-022-26816-5

N/A

0DataRank · unranked

21 citations

Yash Sharma, Fatima Zulqarnain, Brooklyn McGrew, Aman Shrivastava, Lubaina Ehsan +11 more

Identifying high-impact variants and genes in exomes of Ashkenazi Jewish inflammatory bowel disease patients

Nature Communications(2023)10.1038/s41467-023-37849-3

N/A

0DataRank · unranked

18 citations

Kyle Gettler, Meltem Ece Kars, Mamta Giri, Dalin Li, Çiğdem Sevim Bayrak +26 more

Longitudinal DNA methylation profiling of the rectal mucosa identifies cell-specific signatures of disease status, severity and clinical outcomes in ulcerative colitis cell-specific DNA methylation signatures of UC

Clinical Epigenetics(2023)10.1186/s13148-023-01462-4

N/A

0DataRank · unranked

15 citations

Hari K. Somineni, Jason D. Matthews, Varun Kilaru, Jeffrey S. Hyams, Lee A. Denson +7 more

The role of admixture in the rare variant contribution to inflammatory bowel disease

Genome Medicine(2023)10.1186/s13073-023-01244-w

N/A

0DataRank · unranked

9 citations

Shivam Sharma, Sini Nagpal, David J. Cutler, John D. Rioux, Judy H. Cho +6 more

Early B-cell development and B-cell maturation are impaired in patients with active hemophagocytic lymphohistiocytosis

Blood(2023)10.1182/blood.2023020426

N/A

0DataRank · unranked

9 citations

Sunita Park, Suresh Venkateswaran, Deepak Kumar, Chengyu Prince, Vaunita Parihar +9 more

Persistent Inflammation of the Rectum in Perianal Fistulizing Crohn's Disease Is Associated With Goblet Cell Function

Gastro Hep Advances(2023)10.1016/j.gastha.2023.09.002

N/A

0DataRank · unranked

6 citations

Sushma Chowdary Maddipatla, Shanta Murthy, Anne Wescott Dodd, Ranjit Pelia, Vasantha L. Kolachala +5 more

Cell Spatial Analysis in Crohn's Disease: Unveiling Local Cell Arrangement Pattern with Graph-based Signatures

arXiv (Cornell University)(2023)10.48550/arxiv.2308.10166

N/A

0DataRank · unranked

0 citations

Si-Chen Zhu, Vasantha L. Kolachala, Lucas W. Remedios, Yeonjoo Hwang, Yutong Sun +14 more

Linking microbial genes to plasma and stool metabolites uncovers host-microbial interactions underlying ulcerative colitis disease course

Cell Host & Microbe(2024)10.1016/j.chom.2023.12.013

N/A

0DataRank · unranked

72 citations

Martin Stražar, Julián Ávila-Pacheco, Daniel F. Rojas‐Tapias, Eric M. Brown, Emily R. Temple +19 more

Machine Learning–Based Prediction of Pediatric Ulcerative Colitis Treatment Response Using Diagnostic Histopathology

Gastroenterology(2024)10.1053/j.gastro.2024.01.033

N/A

0DataRank · unranked

23 citations

V. B. Surya Prasath, Iram Siddiqui, Thomas D. Walters, Lee A. Denson, Jeffrey S. Hyams +22 more

MRI and Blood-based Biomarkers Are Associated With Surgery in Children and Adults With Ileal Crohn’s Disease

Inflammatory Bowel Diseases(2024)10.1093/ibd/izae101

N/A

0DataRank · unranked

9 citations

Jean A. Tkach, Joel G. Fletcher, David H. Bruining, Aiming Lu, Subra Kugathasan +15 more

PTGER4 signaling regulates class IIa HDAC function and SPINK4 mRNA levels in rectal epithelial cells

Cell Communication and Signaling(2024)10.1186/s12964-024-01879-1

N/A

0DataRank · unranked

5 citations

Garima Sharma, Shanta Murthy, Sushma Chowdary Maddipatla, Vasantha L. Kolachala, Anne Wescott Dodd +5 more

An isoform quantitative trait locus in SBNO2 links genetic susceptibility to Crohn’s disease with defective antimicrobial activity

Nature Communications(2024)10.1038/s41467-024-47218-3

N/A

0DataRank · unranked

4 citations

Isar Nassiri, Suresh Venkateswaran, Sumeet Pandey, Matthew Page, Lauren Drowley +5 more

Cell spatial analysis in Crohn's disease: unveiling local cell arrangement pattern with graph-based signatures

PubMed(2024)10.1117/12.3006675

N/A

0DataRank · unranked

2 citations

Si-Chen Zhu, Vasantha L. Kolachala, Lucas W. Remedios, Yeonjoo Hwang, Yutong Sun +15 more

Mapping and characterization of structural variation in 17,795 human genomes

UNC Libraries(2024)10.17615/bjv3-ys88

Top 100%

0DataRank

Top 100%0 citations

S.S. Rich, Elizabeth L. Appelbaum, Ryan M. Layer, Subra Kugathasan, Scott M. Damrauer +95 more

Postoperative Ileum Transcriptomics Implicate Sex-Biased Mechanisms in Crohn’s Disease Recurrence

Gastroenterology(2025)10.1053/j.gastro.2025.08.038

N/A

0DataRank · unranked

3 citations

Sini Nagpal, Savannah Washburn, Christopher Tastad, Jiayu Zhang, Ksenija Sabic +20 more

Circulating and Magnetic Resonance Imaging Biomarkers of Intestinal Fibrosis in Small Bowel Crohn’s Disease

Inflammatory Bowel Diseases(2025)10.1093/ibd/izae319

N/A

0DataRank · unranked

1 citations

Jean A. Tkach, Joel G. Fletcher, David H. Bruining, Aiming Lu, Subra Kugathasan +20 more

Short Ileal Microvillus Length Phenotype Associates with Progression from Inflammatory to Complicated Disease Behavior in Pediatric Crohn’s Disease

Inflammatory Bowel Diseases(2025)10.1093/ibd/izaf288

N/A

0DataRank · unranked

1 citations

Tzipi Braun, Rebekah Karns, Courtney A. Bartel, Erin Bonkowski, Katherine F. Simpson +7 more

snATAC-Express infers Gene Expression from Prioritized Chromatin Accessibility Peaks using Machine Learning

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.25.666784

N/A

0DataRank · unranked

0 citations

Alessandro Ferrari, Anne Wescott Dodd, Shi Fang, Vasantha L. Kolachala, Subra Kugathasan +3 more

A Myeloid Lineage Signifying Anti-tumor Necrosis Factor Resistance in Crohn’s Disease

Cellular and Molecular Gastroenterology and Hepatology(2025)10.1016/j.jcmgh.2025.101636

N/A

0DataRank · unranked

0 citations

Duke Geem, Kodhai Duraiarasan, Sushma Chowdary Maddipatla, Shanta Murthy, Yeonjoo Hwang +12 more

Common and Rare Variant Prediction and Penetrance of IBD in a Large, Multi-ethnic, Health System-based Biobank Cohort

Gastroenterology(2020)10.1053/j.gastro.2020.12.034

N/A

0DataRank · unranked

90 citations

Rachel Levantovsky, Arden Moscati, Mamta Giri, Yiming Wu, Nai-Yun Hsu +17 more

Altered Intestinal ACE2 Levels Are Associated With Inflammation, Severe Disease, and Response to Anti-Cytokine Therapy in Inflammatory Bowel Disease

Gastroenterology(2020)10.1053/j.gastro.2020.10.041

N/A

0DataRank · unranked

72 citations

Shishir Dube, Takeo Naito, Katherine Li, Gregory J. Botwin, Talin Haritunians +14 more

Stressful life events, depression, and the moderating role of psychophysiological reactivity in patients with pediatric inflammatory bowel disease

Journal of Psychosomatic Research(2020)10.1016/j.jpsychores.2020.110323

N/A

0DataRank · unranked

14 citations

Sharon Shih, Mary Stolz, Rebecca Hinrichs, Tanja Jovanović, Jennifer L. Lee +3 more

Analysis of Using the Total White Blood Cell Count to Define Severe New‐onset Ulcerative Colitis in Children

Journal of Pediatric Gastroenterology and Nutrition(2020)10.1097/mpg.0000000000002797

N/A

0DataRank · unranked

16 citations

Bradley Saul, Brendan Boyle, Anne M. Griffiths, Cary G. Sauer, James Markowitz +18 more

It Takes Two to Make It Right: Dual Biologic and Small Molecule Therapy for Treatment-Refractory Pediatric Inflammatory Bowel Disease

Inflammatory Bowel Diseases(2020)10.1093/ibd/izaa279

N/A

0DataRank · unranked

9 citations

Subra Kugathasan, Duke Geem

Machine learning identifies novel blood protein predictors of penetrating and stricturing complications in newly diagnosed paediatric Crohn's disease

Alimentary Pharmacology & Therapeutics(2020)10.1111/apt.16136

N/A

0DataRank · unranked

46 citations

Liangyuan Hu, Jiayi Ji, Shikha Nayar, Subra Kugathasan, Lee A. Denson +5 more

PTSD is associated with increased DNA methylation across regions of HLA-DPB1 and SPATC1L

Brain Behavior and Immunity(2020)10.1016/j.bbi.2020.10.023

N/A

0DataRank · unranked

35 citations

Yuanchao Zheng, Aarti Gautam, Rasha Hammamieh, Ruoting Yang, Suresh Venkateswaran +18 more

Subra Kugathasan

Indexed papers

Top data-sharing exemplar

Papers