🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Lukas Heumos

XLAB (Slovenia)

ORCID: 0000-0002-8937-3457
Biochemistry, Genetics and Molecular BiologyMedicineDecision SciencesComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
13.4Author DataRank

Indexed papers

5in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The scverse project provides a computational ecosystem for single-cell omics data analysis

Nature Biotechnology(2023)10.1038/s41587-023-01733-8
Top 4%
5.4DataRank
Top 4%353 citations

Danila Bredikhin, Lukas Heumos, Giovanni Palla, Gregor Sturm, Adam Gayoso +29 more

Papers

Driven by 14 papers — median percentile 92. Top paper: “The scverse project provides a computational ecosystem for single-cell omics data analysis”.

The scverse project provides a computational ecosystem for single-cell omics data analysis

Nature Biotechnology(2023)10.1038/s41587-023-01733-8
Top 4%
5.4DataRank
Top 4%353 citations

Danila Bredikhin, Lukas Heumos, Giovanni Palla, Gregor Sturm, Adam Gayoso +29 more

An integrated cell atlas of the lung in health and disease

Nature Medicine(2023)10.1038/s41591-023-02327-2
Top 4%
5.0DataRank
Top 4%781 citations

Ciro Ramírez-Suástegui, Tessa E. Gillett, Luke Zappia, Elo Madissoon, Nikolay S. Markov +87 more

An integrated cell atlas of the human lung in health and disease

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.10.483747
Top 8%
2.8DataRank
Top 8%97 citations

Daniel Strobl, Luke Zappia, Nikolay S. Markov, Laure-Emmanuelle Zaragosi, Marie-Jeanne Arguel +77 more

Sfaira accelerates data and model reuse in single cell genomics

Genome Biology(2021)10.1186/s13059-021-02452-6
N/A
1.1DataRank · unranked
34 citations

Leander Dony, Martin König, Abdul Moeed, Luke Zappia, Lukas Heumos +5 more

Best practices for single-cell analysis across modalities

Nature Reviews Genetics(2023)10.1038/s41576-023-00586-w
N/A
1.0DataRank · unranked
1013 citations

Anna Christina Schaar, Christopher Lance, Anastasia Litinetskaya, Felix Drost, Luke Zappia +34 more

Probe set selection for targeted spatial transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.16.504115
N/A
0.890DataRank · unranked
24 citations

Malte D. Luecken, Alexandra B. Firsova, Lisa Barros de Andrade e Sousa, Lena Straßer, Lukas Heumos +14 more

Ex vivo tissue perturbations coupled to single-cell RNA-seq reveal multilineage cell circuit dynamics in human lung fibrogenesis

Science Translational Medicine(2023)10.1126/scitranslmed.adh0908
N/A
0.624DataRank · unranked
63 citations

Janine Gote-Schniering, Diana Porras-Gonzalez, Lin Yang, Laurens J. De Sadeleer, R. Christoph Jentzsch +27 more

hadge: a comprehensive pipeline for donor deconvolution in single-cell studies

Genome Biology(2024)10.1186/s13059-024-03249-z
N/A
0.523DataRank · unranked
9 citations

Xichen Wu, Lukas Heumos, Mylene Mariana Gonzales André, Lennard Halle, Matiss Ozols +9 more

Ex vivo tissue perturbations coupled to single-cell RNA-seq reveal multi-lineage cell circuit dynamics in human lung fibrogenesis

Mechanisms of lung injury and repair(2023)10.1183/13993003.congress-2023.oa1569
N/A
0.373DataRank · unranked
6 citations

Janine Gote-Schniering, Diana Porras-Gonzalez, Lin Yang, Laurens J. De Sadeleer, R. Christoph Jentzsch +25 more

Ex vivo tissue perturbations coupled to single cell RNA-seq reveal multi-lineage cell circuit dynamics in human lung fibrogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.16.524219
N/A
0.326DataRank · unranked
4 citations

Janine Gote-Schniering, Diana Porras-Gonzalez, Lin Yang, Laurens J. De Sadeleer, R. Christoph Jentzsch +24 more

Exploratory electronic health record analysis with ehrapy

medRxiv(2023)10.1101/2023.12.11.23299816
N/A
0.178DataRank · unranked
2 citations

Philipp Ehmele, Tim Treis, Julius Upmeier zu Belzen, Altana Namsaraeva, Nastassya Horlava +15 more

scPortrait integrates single-cell images into multimodal modeling

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.09.22.677590
N/A
0.165DataRank · unranked
2 citations

Niklas A. Schmacke, Alessandro Palma, Altana Namsaraeva, Ali Oğuz Can, Varvara Varlamova +7 more

An integrated cell atlas of the human lung in health and disease

Research Square(2022)10.21203/rs.3.rs-1438584/v1
Top 71%
0.127DataRank
Top 71%1 citations

Avi Srivastava, Daniel Strobl, Luke Zappia, Elo Madissoon, Nikolay S. Markov +80 more

A spatially resolved extracellular matrix proteome atlas of the distal human lung

Mechanisms of lung injury and repair(2023)10.1183/13993003.congress-2023.oa2626
Top 72%
0.111DataRank
Top 72%1 citations

Janine Gote-Schniering, Michaela Müller, Pascal Albanese, Andris Jankevics, R. Christoph Jentzsch +22 more