Sami J. Barmada

MedicineNeuroscienceBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 54 papers. Top paper: “Poly(GR) and poly(GA) in cerebrospinal fluid as potential biomarkers for C9ORF72-ALS/FTD”.

Poly(GR) and poly(GA) in cerebrospinal fluid as potential biomarkers for C9ORF72-ALS/FTD

Nature Communications(2022)10.1038/s41467-022-30387-4

N/A

1.1DataRank · unranked

54 citations

Denitza Raitcheva, Daniel A. Bartlett, Mercedes Prudencio, Diane McKenna‐Yasek, Catherine Douthwright +12 more

Comprehensive cross-sectional and longitudinal analyses of plasma neurofilament light across FTD spectrum disorders

Cell Reports Medicine(2022)10.1016/j.xcrm.2022.100607

N/A

0.641DataRank · unranked

71 citations

Michael G. Heckman, Launia J. White, Austin M. Veire, Otto Pedraza, Alexander R. Burch +77 more

Cytoplasmic TDP43 Binds microRNAs: New Disease Targets in Amyotrophic Lateral Sclerosis

Frontiers in Cellular Neuroscience(2020)10.3389/fncel.2020.00117

N/A

0DataRank · unranked

32 citations

Claudia Figueroa‐Romero, Amy E. Rumora, Junguk Hur, Faye E. Mendelson, John M. Hayes +8 more

TDP-43 stabilizes transcripts encoding stress granule protein G3BP1: potential relevance to ALS/FTD

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.15.298455

N/A

0DataRank · unranked

3 citations

Yousra Khalfallah, Shangxi Xiao, Nicolás Gómez, Elizabeth M.H. Tank, Geneviève Di Tomasso +14 more

The carboxyl-termini of RAN translated GGGGCC nucleotide repeat expansions modulate toxicity in models of ALS/FTD

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.27.119651

N/A

0DataRank · unranked

1 citations

Brittany N. Flores, Amy Krans, Michelle Frazer, Sam Natla, Sarjina Niraula +4 more

TDP-43 stabilizes G3BP1 mRNA: relevance to amyotrophic lateral sclerosis/frontotemporal dementia

Brain(2021)10.1093/brain/awab217

N/A

0DataRank · unranked

65 citations

Yousra Khalfallah, Shangxi Xiao, Nicolás Gómez, Hana Fakim, Elizabeth M.H. Tank +15 more

Matrin 3 in neuromuscular disease: physiology and pathophysiology

JCI Insight(2021)10.1172/jci.insight.143948

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0DataRank · unranked

52 citations

Sami J. Barmada, Ahmed M. Malik

Enhanced detection of expanded repeat mRNA foci with hybridization chain reaction

Acta Neuropathologica Communications(2021)10.1186/s40478-021-01169-8

N/A

0DataRank · unranked

19 citations

Yuan Zhang, Amy Krans, Elizabeth M.H. Tank, Sami J. Barmada, Peter K. Todd +1 more

Development of a specific live-cell assay for native autophagic flux

Journal of Biological Chemistry(2021)10.1016/j.jbc.2021.101003

N/A

0DataRank · unranked

20 citations

Elizabeth M.H. Tank, Ahmed M. Malik, Jason P. Chua, Nicholas Santoro, Sami J. Barmada +1 more

ALS-associated mutation FUS-R521C causes DNA damage and RNA splicing defects

Journal of Clinical Investigation(2021)10.1172/jci149564

N/A

0DataRank · unranked

6 citations

Sebum Lee, Yulei Shang, Wenyuan Wang, Kin Fai Au, Sherry Kamiya +15 more

Enhanced detection of nucleotide repeat mRNA with hybridization chain reaction

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.06.425640

N/A

0DataRank · unranked

1 citations

Yuan Zhang, Elizabeth M.H. Tank, Sami J. Barmada, Peter K. Todd, M. Rebecca Glineburg

Myotubularin-related phosphatase 5 is a critical determinant of autophagy in neurons

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.20.453106

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0DataRank · unranked

1 citations

Karan Bedi, Michelle T. Paulsen, Mats Ljungman, Elizabeth M.H. Tank, Erin S. Kim +5 more

Heat Shock Protein Grp78/BiP/HspA5 Binds Directly to TDP-43 and Mitigates Toxicity Associated with Neurodegenerative Disease Pathology

Research Square(2021)10.21203/rs.3.rs-1090289/v1

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0DataRank · unranked

1 citations

David D. Scott, Andrew J. Ambrose, Christopher J. Zerio, Kumara Dissanayake, Danielle G. May +10 more

Exploring Multimodal Ocular Imaging for Retinal Biomarkers of Alzheimer’s Disease, Frontotemporal Dementia, and Cognitively Normal Subjects

Research Square(2021)10.21203/rs.3.rs-806032/v1

N/A

0DataRank · unranked

0 citations

Nikhila Khandwala, Omar Moinuddin, Benjamin K. Young, Warren W. Pan, Sanjana Sathrasala +7 more

ASLPrep: a platform for processing of arterial spin labeled MRI and quantification of regional brain perfusion

Nature Methods(2022)10.1038/s41592-022-01458-7

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0DataRank · unranked

49 citations

Maxwell A. Bertolero, Sudipto Dolui, Matthew Cieslak, Kristin Murtha, Erica B. Baller +94 more

Nuclear import receptors are recruited by FG-nucleoporins to rescue hallmarks of TDP-43 proteinopathy

Molecular Neurodegeneration(2022)10.1186/s13024-022-00585-1

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0DataRank · unranked

48 citations

Deepak Chhangani, Melissa C. Wren, Courtney L. Smith, Jannifer H. Lee, Xingli Li +23 more

CGG repeats trigger translational frameshifts that generate aggregation-prone chimeric proteins

Nucleic Acids Research(2022)10.1093/nar/gkac626

N/A

0DataRank · unranked

47 citations

Caitlin M. Rodriguez, Jeremy Monroe, Jiazheng Xing, Amy Krans, Brittany N. Flores +6 more

Heat shock protein Grp78/BiP/HspA5 binds directly to TDP-43 and mitigates toxicity associated with disease pathology

Scientific Reports(2022)10.1038/s41598-022-12191-8

N/A

0DataRank · unranked

41 citations

David D. Scott, Andrew J. Ambrose, Christopher J. Zerio, Marina Rodriguez-Sanchez, Kumara Dissanayake +11 more

Myotubularin-related phosphatase 5 is a critical determinant of autophagy in neurons

Current Biology(2022)10.1016/j.cub.2022.04.053

N/A

0DataRank · unranked

26 citations

Karan Bedi, Michelle T. Paulsen, Mats Ljungman, Elizabeth M.H. Tank, Erin S. Kim +6 more

miRNA analysis reveals novel dysregulated pathways in amyotrophic lateral sclerosis

Human Molecular Genetics(2022)10.1093/hmg/ddac250

N/A

0DataRank · unranked

13 citations

Ximena Paez-Colasante, Claudia Figueroa‐Romero, Ting‐Wen Lo, Sami J. Barmada, Michelle T. Paulsen +6 more

Disrupting the Balance of Protein Quality Control Protein UBQLN2 Accelerates Tau Proteinopathy

Journal of Neuroscience(2022)10.1523/jneurosci.1116-21.2021

N/A

0DataRank · unranked

14 citations

Stephanie S. Sandoval-Pistorius, Jacqueline Welday, Aleija L. Rodriguez, Jordan D. Gregory, Nyjerus Liggans +7 more

RNA methylation influences TDP43 binding and disease pathogenesis in models of amyotrophic lateral sclerosis and frontotemporal dementia

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.03.486880

N/A

0DataRank · unranked

8 citations

Nicolás Gómez, Michael E. Bekier, X Li, Roberto Miguez, EM Tank +2 more

RNA methylation influences TDP43 binding and disease pathogenesis in models of amyotrophic lateral sclerosis and frontotemporal dementia

Molecular Cell(2023)10.1016/j.molcel.2022.12.019

N/A

0DataRank · unranked

111 citations

Nicolás Gómez, Caroline Hsieh, Michael E. Bekier, Xingli Li, Roberto Miguez +3 more

Roadmap for C9ORF72 in Frontotemporal Dementia and Amyotrophic Lateral Sclerosis: Report on the C9ORF72 FTD/ALS Summit

Neurology and Therapy(2023)10.1007/s40120-023-00548-8

N/A

0DataRank · unranked

34 citations

Bryan J. Traynor, Janice Robertson, Ludo Van Den Bosch, Sami J. Barmada, Clive N. Svendsen +49 more

C-terminal frameshift variant of TDP-43 with pronounced aggregation-propensity causes rimmed vacuole myopathy but not ALS/FTD

Acta Neuropathologica(2023)10.1007/s00401-023-02565-1

N/A

0DataRank · unranked

24 citations

Nika Schuermans, Antoon Meylemans, Pontus LeBlanc, Lauren Versluys, Katie E. Copley +17 more

Ubiquilin-2 regulates pathological alpha-synuclein

Scientific Reports(2023)10.1038/s41598-022-26899-0

N/A

0DataRank · unranked

11 citations

Julia E. Gerson, Nyjerus Liggans, Jaimie H. Ryou, Kulin Oak, Xingli Li +9 more

The MLO-down on TDP-43

Brain(2023)10.1093/brain/awad268

N/A

0DataRank · unranked

3 citations

Sami J. Barmada, Megan Dykstra

Glia in FTLD-GRN: from supporting cast to leading role

Journal of Clinical Investigation(2023)10.1172/jci168215

N/A

0DataRank · unranked

3 citations

Sami J. Barmada, Emile Pinarbasi

AAGGG repeat expansions trigger RFC1-independent synaptic dysregulation in human CANVAS Neurons

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.13.571345

N/A

0DataRank · unranked

7 citations

Amy Krans, Samantha J. Grudzien, Yomira Palacios, Jessica Muiños, Andrea Suárez +6 more

TorsinA is essential for the timing and localization of neuronal nuclear pore complex biogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.26.538491

N/A

0DataRank · unranked

4 citations

Sébastien Phan, Thomas R. Shaw, Mark H. Ellisman, Sarah L. Veatch, Sami J. Barmada +3 more

Ribosomal quality control factors inhibit repeat-associated non-AUG translation from GC-rich repeats

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.07.544135

N/A

0DataRank · unranked

4 citations

Indranil Malik, Xiexiong Deng, Amy Krans, Karen Jansen‐West, Elizabeth M.H. Tank +6 more

Stress granule formation helps to mitigate neurodegeneration

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.07.566060

N/A

0DataRank · unranked

3 citations

Evrim Yildirim, Nicolás Gómez, Xingli Li, Jaclyn Pak, Christopher Altheim +5 more

Stress granule formation helps to mitigate neurodegeneration

Nucleic Acids Research(2024)10.1093/nar/gkae655

N/A

0DataRank · unranked

33 citations

Evrim Yildirim, Nicolás Gómez, Genesis Rodriguez, Jaclyn Pak, Xingli Li +6 more

Reliability and Validity of Smartphone Cognitive Testing for Frontotemporal Lobar Degeneration

JAMA Network Open(2024)10.1001/jamanetworkopen.2024.4266

N/A

0DataRank · unranked

21 citations

Annie L Clark, Jack C. Taylor, Hilary W. Heuer, Mark Sanderson‐Cimino, Amy B. Wise +72 more

TorsinA is essential for neuronal nuclear pore complex localization and maturation

Nature Cell Biology(2024)10.1038/s41556-024-01480-1

N/A

0DataRank · unranked

17 citations

Sébastien Phan, Hung Tri Tran, Thomas R. Shaw, Sarah H. Shahmoradian, Mark H. Ellisman +5 more

Ribosomal quality control factors inhibit repeat-associated non-AUG translation from GC-rich repeats

Nucleic Acids Research(2024)10.1093/nar/gkae137

N/A

0DataRank · unranked

20 citations

Amy Krans, Indranil Malik, Xiexiong Deng, Evrim Yildirim, Sinem Ovunc +9 more

Pathogenic mutations in UBQLN2 exhibit diverse aggregation propensity and neurotoxicity

Scientific Reports(2024)10.1038/s41598-024-55582-9

N/A

0DataRank · unranked

20 citations

Thuy P. Dao, Harihar Milaganur Mohan, Camellia Huang, Bryce Trotter, Carlos A. Castañeda +4 more

Gene-Specific Effects on Brain Volume and Cognition of TMEM106B in Frontotemporal Lobar Degeneration

Neurology(2024)10.1212/wnl.0000000000209832

N/A

0DataRank · unranked

7 citations

Eliana Marisa Ramos, Nick Corriveau‐Lecavalier, Vijay K. Ramanan, John Kornak, Carly Mester +50 more

Psychotropic medication usage in sporadic versus genetic behavioral‐variant frontotemporal dementia

Alzheimer s & Dementia(2024)10.1002/alz.14448

N/A

0DataRank · unranked

1 citations

Nico Dimal, Kasey Cortez, Hilary W. Heuer, Leah K. Forsberg, Brian S. Appleby +32 more

Molecular Visualization of Neuronal TDP43 Pathology In Situ

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.08.19.608477

N/A

0DataRank · unranked

8 citations

Durga Attili, Matthew L. Chang, Michael Bekier, Emile S. Pinarbasi, Jennifer E. Russ +8 more

Counter-regulation of RNA stability by UPF1 and TDP43

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.31.578310

N/A

0DataRank · unranked

5 citations

Caroline Hsieh, Xingli Li, Megan Dykstra, Jacob Waksmacki, Christopher Altheim +7 more

Symptomatic progression of frontotemporal dementia with the TARDBP I383V variant

Neurocase(2024)10.1080/13554794.2024.2354540

N/A

0DataRank · unranked

0 citations

D. Carter, Eliana Marisa Ramos, Joie Molden, Kaitlin Smith, Francesca Dino +16 more

TDP43 autoregulation gives rise to dominant negative isoforms that are tightly controlled by transcriptional and post-translational mechanisms

Cell Reports(2025)10.1016/j.celrep.2024.115113

N/A

0DataRank · unranked

12 citations

Kaitlin Weskamp, Nicolás Gómez, Jacob Waksmacki, Elizabeth M.H. Tank, M. Rebecca Glineburg +21 more

Nemo-like kinase disrupts nuclear import and drives TDP43 mislocalization in ALS

Journal of Clinical Investigation(2025)10.1172/jci188138

N/A

0DataRank · unranked

1 citations

Emile Pinarbasi, Gopinath Krishnan, Jack J. Mesojedec, Madelaine Hurley, Harisankar Harikumar Sheela +12 more

Rsp5/NEDD4 and ESCRT regulate TDP-43 toxicity and turnover via an endolysosomal clearance mechanism

The Journal of Cell Biology(2025)10.1083/jcb.202212064

N/A

0DataRank · unranked

1 citations

Lucas J. Marmorale, Sophia Marcinowski, Megan M. Dykstra, Vanessa Addison, Sami J. Barmada +2 more

Nemo-like kinase disrupts nuclear import and drives TDP43 mislocalization in ALS

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.27.635090

N/A

0DataRank · unranked

0 citations

Emile Pinarbasi, Jack J. Mesojedec, Layla Ghaffari, Martina de Majo, Erik M. Ullian +7 more

An autism spectrum disorder mutation in Topoisomerase 3β causes accumulation of covalent mRNA intermediates by disrupting metal binding within the zinc finger domain

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.11.647616

N/A

0DataRank · unranked

0 citations

Durga Attili, Trevor van Eeuwen, Benjamin Pastore, Sarah E. Hoffmann-Weitsman, Nicholas C. Forsyth +4 more

Network-level high definition tDCS in a complex patient presentation

Brain stimulation(2025)10.1016/j.brs.2025.04.016

N/A

0DataRank · unranked

0 citations

Victor Di Rita, B. Schneider, Sami J. Barmada, Benjamin M. Hampstead, Alexandru D. Iordan

Cryptic intronic transcriptional initiation generates efficient endogenous mRNA templates for C9orf72-associated RAN translation

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.27.650888

N/A

0DataRank · unranked

0 citations

Katelyn M. Green, Bradley Crone, Jessica A. Switzenberg, Elizabeth M.H. Tank, Amy Krans +8 more

Inhibiting glycogen synthase kinase 3 suppresses TDP-43-mediated neurotoxicity in a caspase-dependent manner

Research Square(2025)10.21203/rs.3.rs-6527592/v1

N/A

0DataRank · unranked

0 citations

Leon Crowley, Francesca Massenzio, Xingli Li, Michael Niblock, Michael P. Coleman +3 more

All roads lead to TDP43: Convergent mechanisms of TDP43 autoregulation

The Journal of Cell Biology(2025)10.1083/jcb.202508101

N/A

0DataRank · unranked

0 citations

Sami J. Barmada, Morgan R. Miller

The carboxyl termini of RAN translated GGGGCC nucleotide repeat expansions modulate toxicity in models of ALS/FTD

Acta Neuropathologica Communications(2020)10.1186/s40478-020-01002-8

N/A

0DataRank · unranked

23 citations

Brittany N. Flores, Amy Krans, Michelle Frazer, Sam Natla, Sarjina Niraula +4 more

An autism spectrum disorder mutation in Topoisomerase 3β causes accumulation of covalent mRNA intermediates by disrupting metal binding within the zinc finger domain

Nucleic Acids Research(2025)10.1093/nar/gkaf1138

N/A

0DataRank · unranked

0 citations

Durga Attili, Trevor van Eeuwen, Benjamin Pastore, Sarah E. Hoffmann-Weitsman, Nicholas C Forsyth +4 more

Ubiquilin-2 differentially regulates polyglutamine disease proteins

Human Molecular Genetics(2020)10.1093/hmg/ddaa152

N/A

0DataRank · unranked

21 citations

Nathaniel Safren, Svetlana Fischer, Ronak Patel, Emily V. Crowley, Jacqueline Welday +5 more