David Landsman

United States National Library of Medicine

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

8.6Author DataRank

Indexed papers

7in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

COG database update: focus on microbial diversity, model organisms, and widespread pathogens

Nucleic Acids Research(2020)10.1093/nar/gkaa1018

Top 3%

5.9DataRank

Top 3%1021 citations

Yuri I. Wolf, Kira S. Makarova, Roberto Vera Alvarez, David Landsman, Eugene V. Koonin +1 more

Papers

Driven by 34 papers — median percentile 85. Top paper: “COG database update: focus on microbial diversity, model organisms, and widespread pathogens”.

COG database update: focus on microbial diversity, model organisms, and widespread pathogens

Nucleic Acids Research(2020)10.1093/nar/gkaa1018

Top 3%

5.9DataRank

Top 3%1021 citations

Yuri I. Wolf, Kira S. Makarova, Roberto Vera Alvarez, David Landsman, Eugene V. Koonin +1 more

HistoneDB 2.0: a histone database with variants—an integrated resource to explore histones and their variants

Database(2016)10.1093/database/baw014

Top 6%

3.5DataRank

Top 6%156 citations

Alexey K. Shaytan, Leonardo Mariño-Ramírez, Paul B. Talbert, David Landsman, Anna R. Panchenko +1 more

Towards BioDBcore: a community-defined information specification for biological databases

Nucleic Acids Research(2010)10.1093/nar/gkq1173

N/A

3.1DataRank · unranked

40 citations

Amos Bairoch, Dawn Field, Chris Taylor, Teresa K. Attwood, Alex Bateman +34 more

COG database update 2024

Nucleic Acids Research(2024)10.1093/nar/gkae983

Top 13%

1.5DataRank

Top 13%128 citations

Roberto Vera Alvarez, Svetlana Karamycheva, Kira S. Makarova, Yuri I. Wolf, David Landsman +2 more

A model of active transcription hubs that unifies the roles of active promoters and enhancers

Nucleic Acids Research(2021)10.1093/nar/gkab235

N/A

1.5DataRank · unranked

59 citations

Wei Song, Ivan Ovcharenko, David Landsman, Iris Zhu

MS_HistoneDB, a manually curated resource for proteomic analysis of human and mouse histones

Epigenetics & Chromatin(2017)10.1186/s13072-016-0109-x

Top 15%

1.3DataRank

Top 15%52 citations

Annie Adrait, Alexey K. Shaytan, Saadi Khochbin, Christophe Bruley, Anna R. Panchenko +4 more

DNA methylation cues in nucleosome geometry, stability and unwrapping

Nucleic Acids Research(2022)10.1093/nar/gkac097

N/A

1.2DataRank · unranked

52 citations

Yunhui Peng, David Landsman, Anna R. Panchenko, Shuxiang Li

Human Histone Interaction Networks: An Old Concept, New Trends

Journal of Molecular Biology(2020)10.1016/j.jmb.2020.10.018

Top 28%

0.717DataRank

Top 28%20 citations

Yaroslav Markov, Alexander Goncearenco, David Landsman, Anna R. Panchenko, Yunhui Peng

Transcriptome annotation in the cloud: complexity, best practices, and cost

GigaScience(2021)10.1093/gigascience/giaa163

N/A

0.449DataRank · unranked

19 citations

Leonardo Mariño‐Ramírez, David Landsman, Roberto Vera Alvarez

GTax: improving de novo transcriptome assembly by removing foreign RNA contamination

Genome biology(2024)10.1186/s13059-023-03141-2

Top 54%

0.306DataRank

Top 54%6 citations

David Landsman, Roberto Vera Alvarez

Data sets on human histone interaction networks

Data in Brief(2020)10.1016/j.dib.2020.106555

Top 63%

0.214DataRank

Top 63%2 citations

Yaroslav Markov, Alexander Goncearenco, David Landsman, Anna R. Panchenko, Yunhui Peng

Mediator dynamics during heat shock in budding yeast

Genome Research(2021)10.1101/gr.275750.121

N/A

0DataRank · unranked

7 citations

Zhengwei Zhu, Elizabeth R. Knoll, Emily Paul, David Landsman, Randall H. Morse +1 more

DNA methylation cues in nucleosome geometry, stability, and unwrapping

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.16.452533

N/A

0DataRank · unranked

0 citations

Yunhui Peng, David Landsman, Anna R. Panchenko, Shuxiang Li

A standardized nomenclature for mammalian histone genes

Epigenetics & Chromatin(2022)10.1186/s13072-022-00467-2

N/A

0DataRank · unranked

67 citations

Paul Denny, Elspeth A. Bruford, Anna K. Gribkova, David Landsman, William F. Marzluff +5 more

Multiple epigenetic factors co-localize with HMGN proteins in A-compartment chromatin

Epigenetics & Chromatin(2022)10.1186/s13072-022-00457-4

N/A

0DataRank · unranked

10 citations

Iris Zhu, Yuri V. Postnikov, Takashi Furusawa, Lisa M. Jenkins, Ravikanth Nanduri +3 more

De novo transcriptome assembly and the effect of foreign RNA contamination

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.07.515468

N/A

0DataRank · unranked

1 citations

David Landsman, Roberto Vera Alvarez

Detection of new pioneer transcription factors as cell-type-specific nucleosome binders

eLife(2023)10.7554/elife.88936

N/A

0DataRank · unranked

16 citations

Wei Song, Vladimir B. Teif, Ivan Ovcharenko, David Landsman, Anna R. Panchenko +1 more

Clustered and diverse transcription factor binding underlies cell type specificity of enhancers for housekeeping genes

Genome Research(2023)10.1101/gr.278130.123

N/A

0DataRank · unranked

7 citations

David Landsman, Iris Zhu

Detection of new pioneer transcription factors as cell-type specific nucleosome binders

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.05.10.540098

N/A

0DataRank · unranked

1 citations

Wei Song, Vladimir B. Teif, Ivan Ovcharenko, David Landsman, Anna R. Panchenko +1 more

Detection of new pioneer transcription factors as cell-type specific nucleosome binders

(2023)10.7554/elife.88936.2

N/A

0DataRank · unranked

1 citations

Wei Song, Vladimir B. Teif, Ivan Ovcharenko, David Landsman, Anna R. Panchenko +1 more

Reviewer #3 (Public Review): Detection of new pioneer transcription factors as cell-type specific nucleosome binders

(2023)10.7554/elife.88936.2.sa0

N/A

0DataRank · unranked

0 citations

Wei Song, Vladimir B. Teif, Ivan Ovcharenko, David Landsman, Anna R. Panchenko +1 more

Detection of new pioneer transcription factors as cell-type specific nucleosome binders

(2023)10.7554/elife.88936.3

N/A

0DataRank · unranked

0 citations

Wei Song, Vladimir B. Teif, Ivan Ovcharenko, David Landsman, Anna R. Panchenko +1 more

Author Response: Detection of new pioneer transcription factors as cell-type specific nucleosome binders

(2023)10.7554/elife.88936.3.sa4

N/A

0DataRank · unranked

0 citations

Wei Song, Vladimir B. Teif, Ivan Ovcharenko, David Landsman, Anna R. Panchenko +1 more

Reviewer #3 (Public Review): Detection of new pioneer transcription factors as cell-type specific nucleosome binders

(2023)10.7554/elife.88936.3.sa0

N/A

0DataRank · unranked

0 citations

Wei Song, Vladimir B. Teif, Ivan Ovcharenko, David Landsman, Anna R. Panchenko +1 more

Detection of new pioneer transcription factors as cell-type-specific nucleosome binders

eLife(2024)10.7554/elife.88936.4

N/A

0DataRank · unranked

17 citations

Wei Song, Vladimir B. Teif, Ivan Ovcharenko, David Landsman, Anna R. Panchenko +1 more

Structural insights into the cooperative nucleosome recognition and chromatin opening by FOXA1 and GATA4

Molecular Cell(2024)10.1016/j.molcel.2024.07.016

N/A

0DataRank · unranked

14 citations

Hanqiao Feng, Furong Huang, Iris Zhu, Stephanie Portillo‐Ledesma, Dan Shi +6 more

Cancer Histone Mutations Impact Binding and DNA Repair Processes, Leading to Increased Mutagenesis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.21.629746

N/A

0DataRank · unranked

1 citations

Yiru Sheng, Yunhui Peng, Daria Ostroverkhova, Shuxiang Li, David Landsman +3 more

Cancer histone mutations impact protein binding and DNA repair with possible links to genomic instability

Nucleic Acids Research(2025)10.1093/nar/gkaf899

N/A

0DataRank · unranked

7 citations

Yiru Sheng, Yunhui Peng, Daria S. Ostroverkhova, Shuxiang Li, David Landsman +3 more

BAMscale: quantification of next-generation sequencing peaks and generation of scaled coverage tracks

Epigenetics & Chromatin(2020)10.1186/s13072-020-00343-x

N/A

0DataRank · unranked

72 citations

Jacob Gross, Roberto Vera Alvarez, Junko Murai, Sang‐Min Jang, Hongliang Zhang +10 more

Histone tails as signaling antennas of chromatin

Current Opinion in Structural Biology(2020)10.1016/j.sbi.2020.10.018

N/A

0DataRank · unranked

81 citations

Shuxiang Li, David Landsman, Anna R. Panchenko, Yunhui Peng

Altered Mediator dynamics during heat shock in budding yeast

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.25.267088

N/A

0DataRank · unranked

1 citations

Zhengwei Zhu, Emily Paul, David Landsman, Randall H. Morse, Debasish Sarkar

BAMscale: quantification of next-generation sequencing peaks and generation of scaled coverage tracks

Research Square(2020)10.21203/rs.2.20856/v2

N/A

0DataRank · unranked

0 citations

Jacob Gross, Roberto Vera Alvarez, Junko Murai, Sang‐Min Jang, Hongliang Zhang +10 more

Binding of regulatory proteins to nucleosomes is modulated by dynamic histone tails

Nature Communications(2021)10.1038/s41467-021-25568-6

N/A

0DataRank · unranked

109 citations

Shuxiang Li, Alexey V. Onufriev, David Landsman, Anna R. Panchenko, Yunhui Peng

PM4NGS, a project management framework for next-generation sequencing data analysis

GigaScience(2021)10.1093/gigascience/giaa141

N/A

0DataRank · unranked

3 citations

Lőrinc Sándor Pongor, Leonardo Mariño‐Ramírez, David Landsman, Roberto Vera Alvarez

David Landsman

Indexed papers

Top data-sharing exemplar

Papers