Grigorios Georgolopoulos

Also affiliated with G. Papanikolaou General Hospital

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

126Author DataRank

Indexed papers

22in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 22 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Nature(2007)10.1038/nature05874

Top 1%

12.9DataRank

Top 1%5277 citations

J Stamatoyannopoulos, Simon G. Gregory, T Gingeras, Eoghan Harrington, Zhiping Weng +286 more

Papers

Driven by 50 papers — median percentile 97. Top paper: “Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project”.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Nature(2007)10.1038/nature05874

Top 1%

12.9DataRank

Top 1%5277 citations

J Stamatoyannopoulos, Simon G. Gregory, T Gingeras, Eoghan Harrington, Zhiping Weng +286 more

GENCODE: The reference human genome annotation for The ENCODE Project

Genome Research(2012)10.1101/gr.135350.111

Top 1%

12.0DataRank

Top 1%5084 citations

Michael G. FitzGerald, Electra Tapanari, Mark Diekhans, Felix Kokocinski, Rizi Ai +42 more

A global reference for human genetic variation

Nature(2015)10.1038/nature15393

Top 1%

10.6DataRank

Top 1%20166 citations

Gonçalo R. Abecasis, Richard M. Durbin, Panagiotis Deloukas, Aravinda Chakravarti, Peter Donnelly +516 more

An integrated map of structural variation in 2,504 human genomes

Nature(2015)10.1038/nature15394

Top 2%

9.1DataRank

Top 2%2686 citations

Tobias Rausch, Marianne K. DeGorter, Robert E. Handsaker, Alexej Abyzov, Joanna M. M. Howson +75 more

Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel

Nature Communications(2014)10.1038/ncomms4934

Top 2%

8.3DataRank

Top 2%460 citations

Jonathan Marchini, Peter Donnelly, Gerton Lunter, Jonathan L. Marchini, Simon Myers +364 more

GENCODE reference annotation for the human and mouse genomes

Nucleic Acids Research(2018)10.1093/nar/gky955

Top 2%

8.2DataRank

Top 2%3533 citations

Mark Diekhans, Anne-Maud Ferreira, Todd A. Johnson, Irwin Jungreis, Jane E Loveland +59 more

A cis-regulatory map of the Drosophila genome

Nature(2011)10.1038/nature09990

Top 3%

7.0DataRank

Top 3%543 citations

Christopher D. Brown, Christopher Aaron Bristow, Steven W. Miller, Ulrich Wagner, Yanxiao Zhang +40 more

Modeling gene expression using chromatin features in various cellular contexts

Genome Biology(2012)10.1186/gb-2012-13-9-r53

Top 3%

6.9DataRank

Top 3%299 citations

Melissa C Greven, Anshul Kundaje, Sarah Djebali, James B Brown, Chao Cheng +6 more

The GENCODE pseudogene resource

Genome Biology(2012)10.1186/gb-2012-13-9-r51

Top 3%

6.9DataRank

Top 3%353 citations

Cristina Sisu, Michael G. FitzGerald, Cédric Howald, Ryan E. Mills, Xinmeng Jasmine Mu +9 more

Defining functional DNA elements in the human genome

Proceedings of the National Academy of Sciences(2014)10.1073/pnas.1318948111

Top 3%

6.9DataRank

Top 3%755 citations

Valentina Snetkova, Louis Philip Benoit Bouvrette, Anshul Kundaje, Georgi K. Marinov, Lucas D. Ward +29 more

GENCODE 2021

Nucleic Acids Research(2020)10.1093/nar/gkaa1087

Top 3%

6.9DataRank

Top 3%1480 citations

Mark Diekhans, Irwin Jungreis, Julien Lagarde, Jane E Loveland, Shinichi Morishita +59 more

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Nature(2020)10.1038/s41586-020-2493-4

Top 3%

6.4DataRank

Top 3%2615 citations

Federico Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal +501 more

Classification of human genomic regions based on experimentally determined binding sites of more than 100 transcription-related factors

Genome Biology(2012)10.1186/gb-2012-13-9-r48

Top 3%

6.2DataRank

Top 3%269 citations

Chao Cheng, Nitin Bhardwaj, James B Brown, Jing Leng, Anshul Kundaje +7 more

Pan-cancer analysis of whole genomes

Nature(2020)10.1038/s41586-020-1969-6

Top 3%

5.9DataRank

Top 3%3307 citations

Lauri A. Aaltonen, Federico Abascal, Adam Abeshouse, Hiroyuki Aburatani, David J. Adams +1244 more

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

Nature(2020)10.1038/s41586-020-1965-x

Top 5%

4.6DataRank

Top 5%668 citations

Federico Abascal, Jeremiah A. Wala, Ofer Shapira, Grace Tiao, Henrik Hornshøj +1240 more

Machine learning and genome annotation: a match meant to be?

Genome Biology(2013)10.1186/gb-2013-14-5-205

N/A

3.8DataRank · unranked

103 citations

Chao Cheng, Grigorios Georgolopoulos, Kevin Y. Yip

Allele-specific epigenome maps reveal sequence-dependent stochastic switching at regulatory loci

Science(2018)10.1126/science.aar3146

N/A

3.6DataRank · unranked

123 citations

Eugene Lurie, Ivenise Carrero, Piotr Pawliczek, Ronak Y. Patel, Joel Rozowsky +15 more

Standardized annotation of translated open reading frames

Nature Biotechnology(2022)10.1038/s41587-022-01369-0

Top 7%

3.2DataRank

Top 7%252 citations

Jorge Ruiz-Orera, John R. Prensner, Marie A. Brunet, Ferriol Calvet, Irwin Jungreis +31 more

Discovery and characterization of coding and non-coding driver mutations in more than 2,500 whole cancer genomes

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/237313

N/A

1.7DataRank · unranked

47 citations

B. F. Francis Ouellette, Federico Abascal, Grace Tiao, Henrik Hornshøj, Nobuyoshi Hiraoka +64 more

Single-cell multi-cohort dissection of the schizophrenia transcriptome

Science(2024)10.1126/science.adg5136

N/A

1.3DataRank · unranked

125 citations

Shahin Mohammadi, José Dávila-Velderrain, Sivan Subburaju, Daniel Reed Tso, Makayla Hourihan +196 more

Landscape of transcription in human cells

Nature(2012)10.1038/nature11233

N/A

1.3DataRank · unranked

5354 citations

Qi Dai, Angelika Merkel, Timo Lassmann, Shinichi Morishita, Andrea Tanzer +91 more

Germline determinants of the somatic mutation landscape in 2,642 cancer genomes

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/208330

Top 17%

1.2DataRank

Top 17%26 citations

Grace Tiao, Bin Zhu, Tobias Rausch, Francesc Muyas, Alan J. Robertson +108 more

ChIP-seq guidelines and practices of the ENCODE and modENCODE consortia

Genome Research(2012)10.1101/gr.136184.111

N/A

1.2DataRank · unranked

2212 citations

Georgi K. Marinov, Anshul Kundaje, Yanxiao Zhang, Florencia Pauli, Serafim Batzoglou +46 more

Massively parallel characterization of regulatory elements in the developing human cortex

Science(2024)10.1126/science.adh0559

N/A

1.2DataRank · unranked

61 citations

Sean Whalen, Marilyn Steyert, Ryan Ziffra, Pawel F. Przytycki, Fumitaka Inoue +197 more

Architecture of the human regulatory network derived from ENCODE data

Nature(2012)10.1038/nature11245

N/A

1.1DataRank · unranked

1548 citations

Anshul Kundaje, Manoj Hariharan, Stephen G. Landt, Koon-Kiu Yan, Chao Cheng +58 more

Complex genetic variation in nearly complete human genomes

Nature(2025)10.1038/s41586-025-09140-6

Top 19%

1.1DataRank

Top 19%83 citations

Peter Ebert, Peter A. Audano, Mark Loftus, David Porubsky, Feyza Yilmaz +62 more

A Systematic Survey of Loss-of-Function Variants in Human Protein-Coding Genes

Science(2012)10.1126/science.1215040

N/A

1.1DataRank · unranked

1321 citations

Suganthi Balasubramanian, Michael G. FitzGerald, Ni Huang, James Morris, Fred R. Hirsch +54 more

Personal Omics Profiling Reveals Dynamic Molecular and Medical Phenotypes

Cell(2012)10.1016/j.cell.2012.02.009

N/A

1.1DataRank · unranked

1301 citations

George I. Mias, Jennifer Li-Pook-Than, Lihua Jiang, Rong Chen, Elana Miriami +42 more

The genomic complexity of primary human prostate cancer

Nature(2011)10.1038/nature09744

N/A

1.1DataRank · unranked

1250 citations

Michael S. Lawrence, Francesca Demichelis, Timothy R. Dreszer, Kristian Cibulskis, Sachet A. Shukla +36 more

The PsychENCODE project

Nature Neuroscience(2015)10.1038/nn.4156

N/A

0.927DataRank · unranked

483 citations

Chunyu Liu, James A. Knowles, Flora M. Vaccarino, Philip L. De Jager, Gregory E. Crawford +87 more

AlleleSeq: analysis of allele‐specific expression and binding in a network framework

Molecular Systems Biology(2011)10.1038/msb.2011.54

N/A

0.882DataRank · unranked

358 citations

Alexej Abyzov, Jing Wang, Pedro Alves, Debasish Raha, Nicholas J. Haradhvala +9 more

Divergence of Transcription Factor Binding Sites Across Related Yeast Species

Science(2007)10.1126/science.1140748

N/A

0.874DataRank · unranked

339 citations

Tara A. Gianoulis, Zhengdong D. Zhang, Gargi Dayama, Joel Rozowsky, Michael R. Seringhaus +6 more

Performance comparison of whole-genome sequencing platforms

Nature Biotechnology(2011)10.1038/nbt.2065

N/A

0.865DataRank · unranked

319 citations

Michael J. Clark, Rui Chen, Rong Chen, Georges Natsoulis, Maeve O'Huallachain +9 more

Comparative analysis of regulatory information and circuits across distant species

Nature(2014)10.1038/nature13668

N/A

0.818DataRank · unranked

232 citations

Carlos L. Araya, Cathleen Brdlik, Philip Cayting, Chao Cheng, Yong Cheng +40 more

Understanding transcriptional regulation by integrative analysis of transcription factor binding data

Genome Research(2012)10.1101/gr.136838.111

N/A

0.779DataRank · unranked

179 citations

Roger Alexander, Renqiang Min, Jing Leng, Kevin Y. Yip, Joel Rozowsky +17 more

Erratum: Corrigendum: Performance comparison of whole-genome sequencing platforms

Nature Biotechnology(2012)10.1038/nbt0612-562e

N/A

0.771DataRank · unranked

9 citations

Michael J. Clark, Rui Chen, Rong Chen, Georges Natsoulis, Maeve O'Huallachain +10 more

Complex genetic variation in nearly complete human genomes

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.24.614721

Top 27%

0.741DataRank

Top 27%27 citations

Peter Ebert, Peter A. Audano, Mark Loftus, David Porubsky, Feyza Yilmaz +62 more

The single-cell opioid responses in the context of HIV (SCORCH) consortium

Molecular Psychiatry(2024)10.1038/s41380-024-02620-7

N/A

0.526DataRank · unranked

16 citations

Rianne R. Campbell, Mary Kay Lobo, Joseph P. Receveur, Kriti Agrawal, Alejandra Borjabad +81 more

An expanded reference catalog of translated open reading frames for biomedical research

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.07.03.662928

Top 53%

0.319DataRank

Top 53%7 citations

Jorge Ruiz-Orera, Jack A. S. Tierney, Jim Clauwaert, Eric W. Deutsch, M. Mar Albà +41 more

Transcriptional determinism and stochasticity contribute to the complexity of autism-associated SHANK family genes

Cell Reports(2024)10.1016/j.celrep.2024.114376

N/A

0.292DataRank · unranked

6 citations

Pengyu Ni, Paola Suarez-Meade, Yu Ma, Emily Niemitz Forrest, Guilin Wang +7 more

Author Correction: Cancer LncRNA Census reveals evidence for deep functional conservation of long noncoding RNAs in tumorigenesis

Communications Biology(2022)10.1038/s42003-022-03769-z

N/A

0.165DataRank · unranked

2 citations

Lars Feuerbach, Chen Hong, David Mas-Ponte, Randi Istrup Pedersen, PCAWG Drivers and Functional Interpretation Group +1255 more

Unlocking the secrets of the genome

UNC Libraries(2020)10.17615/aw2c-np04

N/A

0.154DataRank · unranked

1 citations

Laura A. L. Dillon, Grigorios Georgolopoulos, Kristin C. Gunsalus, Steven Henikoff, Gary H. Karpen +10 more

GENCODE: Creating a Validated Manually Annotated Geneset for the Whole Human Genome

Nature Precedings(2009)10.1038/npre.2009.3155.1

Top 71%

0.128DataRank

Top 71%1 citations

Giulio Formenti, Rizi Ai, Nicholas J. Dickens, Genome Institute at Washington University, Michael Tress +45 more

CellForge: Agentic Design of Virtual Cell Models

arXiv (Cornell University)(2025)10.48550/arxiv.2508.02276

N/A

0.104DataRank · unranked

1 citations

Z. Q. Yu, Jiapeng Chen, Yan Cui, Dan Shao, W.M. Wang +9 more

Large-scale discovery of potent, compact and erythroid specific enhancers for gene therapy vectors

Nature Communications(2025)10.1038/s41467-025-59235-x

N/A

0DataRank · unranked

4 citations

Pavel Sova, Grigorios Georgolopoulos, Kiriaki Paschoudi, Mineo Iwata, Jordan Bloom +11 more

Author Correction: Combined burden and functional impact tests for cancer driver discovery using DriverPower

Nature Communications(2022)10.1038/s41467-022-32343-8

N/A

0DataRank · unranked

0 citations

PCAWG Drivers and Functional Interpretation Working Group, Federico Abascal, Samirkumar B. Amin, Pratiti Bandopadhayay, Rameen Beroukhim +1242 more

Enhanced HbF reactivation by multiplex mutagenesis of thalassemic CD34+ cells in vitro and in vivo

Blood(2021)10.1182/blood.2020010020

N/A

0DataRank · unranked

42 citations

Grigorios Georgolopoulos, Chang Li, Vivek Nandakumar, Reyes Acosta, Kiriaki Paschoudi +9 more

Integrated multi-omics reveal polycomb repressive complex 2 restricts human trophoblast induction

Nature Cell Biology(2022)10.1038/s41556-022-00932-w

N/A

0DataRank · unranked

80 citations

Irene Talón, Sigrid Verhelst, Adam Bendall, Karlien Van Nerum, Alok Javali +32 more

Large-scale discovery of potent, compact and lineage specific enhancers for gene therapy vectors

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.04.559165

N/A

0DataRank · unranked

1 citations

Pavel Sova, Grigorios Georgolopoulos, Kiriaki Paschoudi, Mineo Iwata, Jordan Bloom +11 more

Open Access: Taking Full Advantage of the Content

SciVee(2010)10.4016/17312.01

N/A

0DataRank · unranked

0 citations

J. Fink, Grigorios Georgolopoulos, Philip E. Bourne

Grigorios Georgolopoulos

Indexed papers

Top data-sharing exemplar

Papers