Jeremy C. Jones

MedicineAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 24 papers. Top paper: “Ancestral sequence reconstruction pinpoints adaptations that enable avian influenza virus transmission in pigs”.

Ancestral sequence reconstruction pinpoints adaptations that enable avian influenza virus transmission in pigs

Nature Microbiology(2021)10.1038/s41564-021-00976-y

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0.896DataRank · unranked

26 citations

Rhodri Harfoot, Yvonne C. F. Su, Jennifer DeBeauchamp, Udayan Joseph, Jayanthi Jayakumar +23 more

Multiple polymerase acidic (PA) I38X substitutions in influenza A(H1N1)pdm09 virus permit polymerase activity and cause reduced baloxavir inhibition

Journal of Antimicrobial Chemotherapy(2020)10.1093/jac/dkaa527

N/A

0.683DataRank · unranked

21 citations

Philippe Noriel Q. Pascua, Walter N. Harrington, Richard J. Webby, Elena A. Govorkova, Jeremy C. Jones

Influenza A virus polymerase acidic protein E23G/K substitutions weaken key baloxavir drug-binding contacts with minimal impact on replication and transmission

PLoS Pathogens(2022)10.1371/journal.ppat.1010698

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0.470DataRank · unranked

22 citations

Bogdan Zagribelnyy, Philippe Noriel Q. Pascua, Dmitry S. Bezrukov, Subrata Barman, Faten A. Okda +4 more

Inflammatory, transcriptomic, and cell fate responses underlying the mammalian transmission of avian influenza viruses

Journal of Virology(2025)10.1128/jvi.00647-25

N/A

0.184DataRank · unranked

2 citations

Timothy Flerlage, Sook‐San Wong, Peter Vogel, Kristine Piza, Patrick Schreiner +9 more

Genetic Evolution of Avian Influenza A (H9N2) Viruses Isolated from Domestic Poultry in Uganda Reveals Evidence of Mammalian Host Adaptation, Increased Virulence and Reduced Sensitivity to Baloxavir

Viruses(2022)10.3390/v14092074

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0DataRank · unranked

8 citations

Titus Tugume, Qouilazoni A. Ukuli, Bernard Erima, Andrew Mubiru, Hannah Kibuuka +12 more

Effect of E23G/K, F36V, N37T, E119D, and E199G polymerase acidic protein substitutions on the replication and baloxavir susceptibility of influenza B viruses

Antiviral Research(2022)10.1016/j.antiviral.2022.105455

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0DataRank · unranked

5 citations

Jeremy C. Jones, Richard J. Webby, Elena A. Govorkova, Philippe Noriel Q. Pascua

Chemical scaffold recycling: Structure-guided conversion of an HIV integrase inhibitor into a potent influenza virus RNA-dependent RNA polymerase inhibitor designed to minimize resistance potential

European Journal of Medicinal Chemistry(2022)10.1016/j.ejmech.2022.115035

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0DataRank · unranked

4 citations

M.G. Cuypers, Mary Ashley Rimmer, Alireza Abdolvahabi, Trushar Jeevan, Gyanendra Kumar +11 more

Influenza A virus polymerase acidic protein E23R substitution is a marker of reduced susceptibility to baloxavir

Antiviral Research(2022)10.1016/j.antiviral.2022.105369

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0DataRank · unranked

8 citations

Samuel W. Rovito, Melissa K. Penaflor, Richard J. Webby, Elena A. Govorkova, Jeremy C. Jones

Rapid evolution of A(H5N1) influenza viruses after intercontinental spread to North America

Research Square(2022)10.21203/rs.3.rs-2136604/v1

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0DataRank · unranked

11 citations

Christopher Patton, Jeremy C. Jones, Trushar Jeevan, Walter N. Harrington, Sanja Trifkovic +18 more

Rapid evolution of A(H5N1) influenza viruses after intercontinental spread to North America

Nature Communications(2023)10.1038/s41467-023-38415-7

N/A

0DataRank · unranked

241 citations

Christopher Patton, Jeremy C. Jones, Trushar Jeevan, Walter N. Harrington, Sanja Trifkovic +18 more

Antiviral Susceptibility of Highly Pathogenic Avian Influenza A(H5N1) Viruses Circulating Globally in 2022–2023

The Journal of Infectious Diseases(2023)10.1093/infdis/jiad418

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0DataRank · unranked

32 citations

Jeremy C. Jones, Patrick Seiler, Ahmed Kandeil, Jasmine Turner, Subrata Barman +4 more

Resistance profiles for the investigational neuraminidase inhibitor AV5080 in influenza A and B viruses

Antiviral Research(2023)10.1016/j.antiviral.2023.105701

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0DataRank · unranked

5 citations

Jeremy C. Jones, Dmitrii O. Shkil, Yan A. Ivanenkov, Philippe Noriel Q. Pascua, Melissa K. Penaflor +4 more

Efficacy of oseltamivir treatment in influenza virus-infected obese mice

mBio(2023)10.1128/mbio.00887-23

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0DataRank · unranked

6 citations

Jeremy C. Jones, Victoria Meliopoulos, Brandi Livingston, Bridgett Sharp, Leonardo D. Estrada +6 more

Highly pathogenic avian influenza A(H5N1) virus in a common bottlenose dolphin (Tursiops truncatus) in Florida

Research Square(2023)10.21203/rs.3.rs-3065313/v1

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0DataRank · unranked

7 citations

Thomas Fabrizio, Robert J. Ossiboff, Christina Kackos, Trushar Jeevan, Jeremy C. Jones +17 more

Highly pathogenic avian influenza A(H5N1) virus in a common bottlenose dolphin (Tursiops truncatus) in Florida

Communications Biology(2024)10.1038/s42003-024-06173-x

N/A

0DataRank · unranked

54 citations

Thomas Fabrizio, Robert J. Ossiboff, Christina Kackos, Trushar Jeevan, Jeremy C. Jones +17 more

Multiple transatlantic incursions of highly pathogenic avian influenza clade 2.3.4.4b A(H5N5) virus into North America and spillover to mammals

Cell Reports(2024)10.1016/j.celrep.2024.114479

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0DataRank · unranked

44 citations

Ahmed Kandeil, Anthony V. Signore, Megan Jones, Peter Vogel, Konstantin Andreev +19 more

Genotypic and phenotypic susceptibility of emerging avian influenza A viruses to neuraminidase and cap-dependent endonuclease inhibitors

Antiviral Research(2024)10.1016/j.antiviral.2024.105959

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0DataRank · unranked

20 citations

Jeremy C. Jones, Patrick Seiler, Ahmed Kandeil, Richard J. Webby, Elena A. Govorkova +1 more

Detection of A(H5N1) influenza virus nucleic acid in retail pasteurized milk

Research Square(2024)10.21203/rs.3.rs-4572362/v1

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0DataRank · unranked

10 citations

Jeremy C. Jones, John Franks, Ahmed Kandeil, Jennifer DeBeauchamp, Lance A. Miller +9 more

Genotype B3.13 influenza A(H5N1) viruses isolated from dairy cattle demonstrate high virulence in laboratory models, but retain avian virus-like properties

Nature Communications(2025)10.1038/s41467-025-61757-3

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0DataRank · unranked

20 citations

Ahmed Kandeil, Walter N. Harrington, Jeremy C. Jones, Trushar Jeevan, Konstantin Andreev +13 more

Modulation of cytokeratin and cytokine/chemokine expression following influenza virus infection of differentiated human tonsillar epithelial cells

Journal of Virology(2025)10.1128/jvi.01460-24

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0DataRank · unranked

2 citations

David C. Brice, Ahmed Sakr, Ahmed Kandeil, Jennifer DeBeauchamp, Mohamed A. Ghonim +12 more

Baloxavir outperforms oseltamivir, favipiravir, and amantadine in treating lethal influenza A(H5N1) HA clade 2.3.4.4b infection in mice

Research Square(2025)10.21203/rs.3.rs-7768971/v1

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0DataRank · unranked

0 citations

Konstantin Andreev, Jeremy C. Jones, Ahmed Kandeil, Peter Vogel, Richard J. Webby +1 more

Synthesis, inhibitory activity and oral dosing formulation of AV5124, the structural analogue of influenza virus endonuclease inhibitor baloxavir

Journal of Antimicrobial Chemotherapy(2020)10.1093/jac/dkaa524

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0DataRank · unranked

15 citations

Oleg D. Mitkin, Jeremy C. Jones, Alexander V. Nikitin, Angela G. Koryakova, Рубен Карапетян +10 more

Antigenic and molecular characterization of low pathogenic avian influenza A(H9N2) viruses in sub-Saharan Africa from 2017 through 2019

Emerging Microbes & Infections(2021)10.1080/22221751.2021.1908097

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0DataRank · unranked

32 citations

Fidélia Djegui, Komla Batawui, Denis K. Byuragaba, Jeremy C. Jones, Fred Wabwire-Mangeni +16 more

Swine H1N1 influenza virus variants with enhanced polymerase activity and HA stability promote airborne transmission in ferrets

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.22.461336

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0DataRank · unranked

2 citations

Jeremy C. Jones, Balaji Banoth, Chet Raj Ojha, Jeri Carol Crumpton, Lisa Kercher +4 more