Toni Gabaldón

Institució Catalana de Recerca i Estudis Avançats

Also affiliated with Barcelona Supercomputing Center, Instituto de Salud Carlos III, Institute for Research in Biomedicine, Universitat Politècnica de Catalunya

MedicineImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.4Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

The Quest for Orthologs orthology benchmark service in 2022

Nucleic Acids Research(2022)10.1093/nar/gkac330

Top 11%

2.0DataRank

Top 11%98 citations

Tamsin E. M. Jones, Dushyanth Jyothi, Bethan Yates, Meritxell Ferret, Laura Portell-Silva +36 more

Papers

Driven by 28 papers — median percentile 73. Top paper: “The Quest for Orthologs orthology benchmark service in 2022”.

The Quest for Orthologs orthology benchmark service in 2022

Nucleic Acids Research(2022)10.1093/nar/gkac330

Top 11%

2.0DataRank

Top 11%98 citations

Tamsin E. M. Jones, Dushyanth Jyothi, Bethan Yates, Meritxell Ferret, Laura Portell-Silva +36 more

trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses

Bioinformatics(2009)10.1093/bioinformatics/btp348

N/A

1.4DataRank · unranked

13256 citations

José M. Silla-Martínez, Toni Gabaldón, Salvador Capella-Gutierrez

Diversity of Secondary Metabolism in Aspergillus nidulans Clinical Isolates

mSphere(2020)10.1128/msphere.00156-20

N/A

1.4DataRank · unranked

63 citations

Rafael Wesley Bastos, Antonis Rokas, Laure Nicolas Annick Ries, Toni Gabaldón, Gustavo H. Goldman +3 more

Drug-Resistant Fungi: An Emerging Challenge Threatening Our Limited Antifungal Armamentarium

Antibiotics(2020)10.3390/antibiotics9120877

N/A

0.854DataRank · unranked

296 citations

Toni Gabaldón, Rocio Garcia‐Rubio, Jeffrey D. Jenks, Martin Hoenigl, Helmut J.F. Salzer +4 more

Worldwide emergence of fluconazole-resistant Candida parapsilosis: current framework and future research roadmap

The Lancet Microbe(2023)10.1016/s2666-5247(23)00067-8

N/A

0.825DataRank · unranked

244 citations

João Nóbrega de Almeida, Macit İlkit, Lisa Lombardi, Austin M. Perry, Marilyn Gao +10 more

Aspergillus fumigatusand aspergillosis: From basics to clinics

Studies in Mycology(2021)10.1016/j.simyco.2021.100115

N/A

0.821DataRank · unranked

237 citations

Agostinho Carvalho, Jos Houbraken, Lisa Lombardi, Rocio Garcia‐Rubio, Jeffrey D. Jenks +16 more

Evolution of the Peroxisomal Proteome

Subcellular Biochemistry(2018)10.1007/978-981-13-2233-4_9

N/A

0.761DataRank · unranked

18 citations

Toni Gabaldón

The Quiet and Underappreciated Rise of Drug-Resistant Invasive Fungal Pathogens

Journal of Fungi(2020)10.3390/jof6030138

N/A

0.750DataRank · unranked

147 citations

Cornelia Lass‐Flörl, Rocio Garcia‐Rubio, Farnaz Daneshnia, Macit İlkit, Teun Boekhout +3 more

The little skate genome and the evolutionary emergence of wing-like fins

Nature(2023)10.1038/s41586-023-05868-1

N/A

0.659DataRank · unranked

80 citations

Elisa de la Calle‐Mustienes, Rafael D. Acemel, Christina Paliou, Silvia Naranjo, Pedro Manuel Martínez‐García +26 more

The evolving species concepts used for yeasts: from phenotypes and genomes to speciation networks

Fungal Diversity(2021)10.1007/s13225-021-00475-9

N/A

0.654DataRank · unranked

77 citations

M. Catherine Aime, Dominik Begerow, Toni Gabaldón, Joseph Heitman, Martin Kemler +7 more

Ten Years of Collaborative Progress in the Quest for Orthologs

Molecular Biology and Evolution(2021)10.1093/molbev/msab098

N/A

0.609DataRank · unranked

57 citations

Ingo Ebersberger, Shawn E. McGlynn, Natasha Glover, Tomohiro Mochizuki, Mateus Patrício +40 more

Multiple Hybridization Events Punctuate the Evolutionary Trajectory of Malassezia furfur

mBio(2022)10.1128/mbio.03853-21

N/A

0.520DataRank · unranked

31 citations

Verónica Mixão, Giuseppe Ianiri, Joleen Pei Zhen Goh, Jan Dijksterhuis, Joseph Heitman +4 more

Comparative genomic analysis of clinicalCandida glabrataisolates identifies multiple polymorphic loci that can improve existing multilocus sequence typing strategy

Studies in Mycology(2021)10.1016/j.simyco.2021.100133

N/A

0.442DataRank · unranked

18 citations

Marina Marcet‐Houben, Farnaz Daneshnia, Saad J. Taj‐Aldeen, Dhwani Batra, Shawn R. Lockhart +4 more

New developments for the Quest for Orthologs benchmark service

NAR Genomics and Bioinformatics(2024)10.1093/nargab/lqae167

Top 43%

0.433DataRank

Top 43%11 citations

Yannis Nevers, Vinh Tran, Dushyanth Jyothi, María Martin, Salvatore Cosentino +16 more

The little skate genome and the evolutionary emergence of wing-like fin appendages

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.21.485123

N/A

0.330DataRank · unranked

8 citations

Elisa de la Calle‐Mustienes, Rafael D. Acemel, Tetsuya Nakamura, Christina Paliou, Silvia Naranjo +26 more

Overlooked Candida glabrata petites are echinocandin tolerant, induce host inflammatory responses, and display poor in vivo fitness

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.15.545195

N/A

0.208DataRank · unranked

3 citations

Farnaz Daneshnia, Hrant Hovhannisyan, Diego Fuentes, Nathaly Cabrera, Christopher Quintin +11 more

Reliable and Specific Protein Function Prediction by Combining Homology with Genomic(s) Context

Molecular Biology Intelligence Unit10.1007/0-387-36747-0_2

N/A

0DataRank · unranked

0 citations

Berend Snel, Toni Gabaldón, Martijn A. Huynen

Functional specialization of Ca2+-binding motifs in human MICU1

International Journal of Biological Macromolecules(2026)10.1016/j.ijbiomac.2026.150702

N/A

0DataRank · unranked

0 citations

Nicolás Palopoli, Maria Silvina Fornasari, Gustavo Parisi, Toni Gabaldón, Ana Julia Velez Rueda +1 more

Impact of sleep fragmentation, heart failure, and their combination, on the gut microbiome

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.11.294447

N/A

0DataRank · unranked

1 citations

Jesse R. Willis, Ester Saus, Ignacio Cabrera-Aguilera, Isaac Almendros, Ramón Farré +4 more

Factors enforcing the species boundary between the human pathogens Cryptococcus neoformans and Cryptococcus deneoformans

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.21.108084

N/A

0DataRank · unranked

0 citations

Marco A. Coelho, Verónica Mixão, Shelly Applen Clancey, Yitong Xu, Sheng Sun +3 more

Factors enforcing the species boundary between the human pathogens Cryptococcus neoformans and Cryptococcus deneoformans

PLoS Genetics(2021)10.1371/journal.pgen.1008871

N/A

0DataRank · unranked

30 citations

Marco A. Coelho, Verónica Mixão, Shelly Applen Clancey, Yitong Xu, Sheng Sun +3 more

Candidemia Among Coronavirus Disease 2019 Patients in Turkey Admitted to Intensive Care Units: A Retrospective Multicenter Study

Open Forum Infectious Diseases(2022)10.1093/ofid/ofac078

N/A

0DataRank · unranked

33 citations

Nevzat Ünal, Tuğrul Hoşbul, Muhammed Alper Özarslan, Ayşe Sultan Karakoyun, Furkan Polat +10 more

Examination of genome-wide ortholog variation in clinical and environmental isolates of the fungal pathogen Aspergillus fumigatus

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.23.485522

N/A

0DataRank · unranked

1 citations

Jacob L. Steenwyk, Matthew E. Mead, Luciano H. B. dos Santos, Shu Zhao, John G. Gibbons +5 more

Overlooked Candida glabrata petites are echinocandin tolerant, induce host inflammatory responses, and display poor in vivo fitness

mBio(2023)10.1128/mbio.01180-23

N/A

0DataRank · unranked

23 citations

Farnaz Daneshnia, Hrant Hovhannisyan, Diego Fuentes, Nathaly Cabrera, Christopher Quinteros +11 more

Whole-genome sequencing confirms a persistent candidaemia clonal outbreak due to multidrug-resistant Candida parapsilosis

Journal of Antimicrobial Chemotherapy(2023)10.1093/jac/dkad112

N/A

0DataRank · unranked

23 citations

Süleyha Hilmioğlu Polat, Macit İlkit, Diego Fuentes, Lisa Lombardi, Ulrike Binder +8 more

PhyKIT: A Multitool for Phylogenomics

Current Protocols(2024)10.1002/cpz1.70016

N/A

0DataRank · unranked

12 citations

Gemma I. Martínez‐Redondo, Thomas J. Buida, Emile Gluck‐Thaler, Xing‐Xing Shen, Toni Gabaldón +3 more

A multidimensional assessment of in-host fitness costs of drug resistance in the opportunistic fungal pathogen Candida glabrata

FEMS Yeast Research(2024)10.1093/femsyr/foae035

N/A

0DataRank · unranked

5 citations

Farnaz Daneshnia, Hrant Hovhannisyan, Nathaly Cabrera, Macit İlkit, Jigar V. Desai +4 more

Functional Specialization of Ca²⁺-Binding Motifs in Human MICU1

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.25.661581

N/A

0DataRank · unranked

0 citations

Nicolás Palopoli, Marı́a Silvina Fornasari, Gustavo Parisi, Toni Gabaldón, Ana Julia Velez Rueda +1 more

Toni Gabaldón

Indexed papers

Top data-sharing exemplar

Papers