🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Jingyi Wu

Third Affiliated Hospital of Southern Medical University

ORCID: 0000-0003-0047-6378

Also affiliated with Southern Medical University

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile
7.8Author DataRank

Indexed papers

3in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors

Nature Medicine(2020)10.1038/s41591-020-0844-1
Top 4%
5.6DataRank
Top 4%819 citations

Caroline B. M. Porter, Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro +45 more

Papers

Driven by 26 papers — median percentile 85. Top paper: “A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors”.

A single-cell and single-nucleus RNA-Seq toolbox for fresh and frozen human tumors

Nature Medicine(2020)10.1038/s41591-020-0844-1
Top 4%
5.6DataRank
Top 4%819 citations

Caroline B. M. Porter, Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro +45 more

A single-cell and single-nucleus RNA-seq toolbox for fresh and frozen human tumors

bioRxiv (Cold Spring Harbor Laboratory)(2019)10.1101/761429
N/A
2.5DataRank · unranked
68 citations

Orr Ashenberg, Julia Waldman, Eugene Drokhlyansky, Isaac Wakiro, Indresh Singh +44 more

A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features

Nature Medicine(2024)10.1038/s41591-024-03215-z
Top 15%
1.3DataRank
Top 15%91 citations

Daniel L. Abravanel, Åsa Segerstolpe, Timothy R. Blosser, Yury Goltsev, Yi Cui +57 more

Spatially organized multicellular immune hubs in human colorectal cancer

Cell(2021)10.1016/j.cell.2021.08.003
N/A
1.0DataRank · unranked
787 citations

Matan Hofree, Siranush Sarkizova, Joshua D. Pirl, Vjola Jorgji, Alborz Bejnood +73 more

Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma

Cancer Cell(2021)10.1016/j.ccell.2021.02.015
N/A
0.964DataRank · unranked
617 citations

Meng Xiao He, Ziad Bakouny, Abhay Kanodia, Sara Napolitano, Jingyi Wu +26 more

A spatial cell atlas of neuroblastoma reveals developmental, epigenetic and spatial axis of tumor heterogeneity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.07.574538
Top 22%
0.898DataRank
Top 22%34 citations

Orr Ashenberg, Natalie B. Collins, Åsa Segerstolpe, Sizun Jiang, Michal Slyper +53 more

Revisiting chromatin packaging in mouse sperm

Genome Research(2023)10.1101/gr.277845.123
N/A
0.542DataRank · unranked
36 citations

Chih-Hsiang Yang, Olga Strelkova, Jingyi Wu, Yu Sun, Sneha Gopalan +7 more

Intertumoral lineage diversity and immunosuppressive transcriptional programs in well-differentiated gastroenteropancreatic neuroendocrine tumors

Science Advances(2023)10.1126/sciadv.add9668
N/A
0.533DataRank · unranked
34 citations

Todd W. Dowrey, Carlos Villacorta Martin, Kevin Bi, Breanna Titchen, Shreya Johri +30 more

Tumor and immune reprogramming during immunotherapy in advanced renal cell carcinoma

Cancer Cell(2025)10.1016/j.ccell.2025.05.009
N/A
0.330DataRank · unranked
8 citations

Meng Xiao He, Ziad Bakouny, Abhay Kanodia, Sara Napolitano, Jingyi Wu +25 more

Multicellular immune hubs and their organization in MMRd and MMRp colorectal cancer

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.30.426796
N/A
0.297DataRank · unranked
4 citations

Matan Hofree, Jonathan Chen, Siranush Sarkizova, Joshua D. Pirl, Vjola Jorgji +71 more

Intertumoral lineage diversity and immunosuppressive transcriptional programs in well-differentiated gastroenteropancreatic neuroendocrine tumors

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.08.515538
N/A
0.243DataRank · unranked
3 citations

Todd W. Dowrey, Carlos Villacorta Martin, Kevin Bi, Breanna Titchen, Shreya Johri +27 more

Revisiting chromatin packaging in mouse sperm

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.26.521943
N/A
0.241DataRank · unranked
4 citations

Chih-Hsiang Yang, Olga Strelkova, Jingyi Wu, Yu Sun, Sneha Gopalan +7 more

Author Correction: A multi-modal single-cell and spatial expression map of metastatic breast cancer biopsies across clinicopathological features

Nature Medicine(2025)10.1038/s41591-025-03665-z
N/A
0.104DataRank · unranked
1 citations

Daniel L. Abravanel, Åsa Segerstolpe, Timothy R. Blosser, Yury Goltsev, Yi Cui +57 more

SHIP‐1 Differentially Regulates IgE‐Induced IL‐10 and Antiviral Responses in Human Monocytes

European Journal of Immunology(2024)10.1002/eji.202451065
N/A
0DataRank · unranked
1 citations

Bailey E. Matthews, Jingyi Wu, Regina K. Rowe, Siva Kumar Solleti

HTAPP_Dissociation of human metastatic breast cancer lymph node excision biopsy to a single-cell suspension for single-cell RNA-seq (using Collagenase 4 and Dispase II) v1

(2021)10.17504/protocols.io.bua9nsh6
N/A
0DataRank · unranked
0 citations

Jingyi Wu, Sébastien Vigneau, Michal Slyper, Asaf Rotem, Orit Rozenblatt–Rosen +4 more

HTAPP_Dissociation of primary neuroblastoma core needle biopsy to a single-cell suspension for single-cell RNA-seq (using papain, density gradient, and optionally ACK) v1

(2020)10.17504/protocols.io.bkgnktve
N/A
0DataRank · unranked
0 citations

Jingyi Wu, Michal Slyper, Sébastien Vigneau, Asaf Rotem, Orit Rozenblatt–Rosen +4 more

BRIDGE- HTAPP_Depletion of CD45+ cells from ovarian cancer ascites single cell suspensions for single-cell RNA-Seq v1

(2019)10.17504/protocols.io.4cqgsvw
N/A
0DataRank · unranked
0 citations

Parin Shah, Mei-Ju Su, Isaac Wakiro, Sara Napolitano, Jingyi Wu +7 more

HTAPP_Processing human ovarian cancer ascites to a single-cell suspension for single-cell RNA-seq v2

(2020)10.17504/protocols.io.bhbkj2kw
N/A
0DataRank · unranked
0 citations

Parin Shah, Mei-Ju Su, Isaac Wakiro, Sara Napolitano, Jingyi Wu +7 more

HTAPP_Dissociation of human ovarian cancer resection to a single-cell suspension for single-cell RNA-seq v1

(2019)10.17504/protocols.io.4kaguse
N/A
0DataRank · unranked
0 citations

Sara Napolitano, Jingyi Wu, Sébastien Vigneau, Asaf Rotem, Orit Rozenblatt–Rosen +4 more

HTAPP_Dissociation of human metastatic breast cancer core needle biopsy to a single-cell suspension for single-cell RNA-seq v2

(2020)10.17504/protocols.io.bhbjj2kn
N/A
0DataRank · unranked
0 citations

Julia Waldman, Jingyi Wu, Abhay Kanodia, Sébastien Vigneau, Asaf Rotem +4 more

HTAPP_Dissociation of primary neuroblastoma resection to a single-cell suspension for single-cell RNA-seq (using papain, density gradient, and optionally ACK) v1

(2021)10.17504/protocols.io.brvnm65e
N/A
0DataRank · unranked
0 citations

Jingyi Wu, Michal Slyper, Sébastien Vigneau, Asaf Rotem, Orit Rozenblatt–Rosen +4 more

HTAPP_Dissociation of human metastatic breast cancer core needle biopsy to a single-cell suspension for single-cell RNA-seq v1

(2019)10.17504/protocols.io.4j7gurn
N/A
0DataRank · unranked
0 citations

Julia Waldman, Jingyi Wu, Abhay Kanodia, Sébastien Vigneau, Asaf Rotem +5 more

HTAPP_Processing human ovarian cancer ascites to a single-cell suspension for single-cell RNA-seq v1

(2019)10.17504/protocols.io.4kbgusn
N/A
0DataRank · unranked
0 citations

Parin Shah, Mei-Ju Su, Isaac Wakiro, Sara Napolitano, Jingyi Wu +7 more

FAM20B-catalyzed glycosaminoglycans control murine tooth number by restricting FGFR2b signaling

BMC Biology(2020)10.1186/s12915-020-00813-4
N/A
0DataRank · unranked
28 citations

Ye Tian, Lu Han, Chao Liu, Tian‐Yu Sun, Ling Li +13 more

Inference of single cell profiles from histology stains with the Single Cell omics from Histology Analysis Framework (SCHAF)

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.21.533680
N/A
0DataRank · unranked
36 citations

Xingjian Chen, Eeshit Dhaval Vaishnav, Koseki J. Kobayashi-Kirschvink, Metamia Ciampricotti, Ke Zhang +30 more

HTAPP_Test protocol_Dissociation of primary neuroblastoma resection to a single-cell suspension for single-cell RNA-seq (using papain and ACK) v1

(2021)10.17504/protocols.io.brvqm65w
N/A
0DataRank · unranked
0 citations

Jingyi Wu, Michal Slyper, Sébastien Vigneau, Asaf Rotem, Orit Rozenblatt–Rosen +4 more