Stacey Gerben

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 25 papers. Top paper: “Accurate de novo design of high-affinity protein-binding macrocycles using deep learning”.

Accurate de novo design of high-affinity protein-binding macrocycles using deep learning

Nature Chemical Biology(2025)10.1038/s41589-025-01929-w

N/A

0.612DataRank · unranked

58 citations

David Juergens, Victor Adebomi, Yensi Flores Bueso, Qinqin Zhao, Alexandria N. Leveille +21 more

Parametrically guided design of beta barrels and transmembrane nanopores using deep learning

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2425459122

N/A

0.385DataRank · unranked

12 citations

Joseph L. Watson, David Juergens, Sagardip Majumder, Ria Sonigra, Stacey Gerben +5 more

Parametrically guided design of beta barrels and transmembrane nanopores using deep learning

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.22.604663

N/A

0.330DataRank · unranked

8 citations

Joseph L. Watson, David Juergens, Sagardip Majumder, Ria Sonigra, Stacey Gerben +5 more

Design of stimulus-responsive two-state hinge proteins

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.27.525968

N/A

0.312DataRank · unranked

7 citations

Philip J. Y. Leung, Maxx H. Tessmer, Adam Broerman, Cullen Demakis, Acacia F. Dishman +18 more

Designed Endocytosis-Triggering Proteins mediate Targeted Degradation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.19.553321

N/A

0.312DataRank · unranked

7 citations

Mohamad H. Abedi, Green Ahn, Brian Coventry, Isaac Sappington, Rong Wang +38 more

Designed miniproteins potently inhibit and protect against MERS-CoV

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.11.03.621760

N/A

0.165DataRank · unranked

2 citations

M. Alejandra Tortorici, Nicholas Catanzaro, Amin Addetia, Brian Coventry, Heather M. Froggatt +17 more

Computational design of metalloproteases

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.20.689622

N/A

0.165DataRank · unranked

2 citations

Kejia Wu, Hojae Choi, Preetham Venkatesh, Samuel J. Pellock, Nikita Hanikel +13 more

Diffusing protein binders to intrinsically disordered proteins

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.16.603789

N/A

0DataRank · unranked

24 citations

Kejia Wu, Hojun Choi, Hannah L. Han, Xulie Zhang, Joseph L. Watson +18 more

De novo designed proteins neutralize lethal snake venom toxins

Research Square(2024)10.21203/rs.3.rs-4402792/v1

N/A

0DataRank · unranked

6 citations

Susana Vázquez Torres, Melisa Benard Valle, Stephen P. Mackessy, Stefanie K. Menzies, Nicholas R. Casewell +28 more

De novo design of transmembrane β-barrels

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.22.346965

N/A

0DataRank · unranked

0 citations

Paul White, Binyong Liang, Jim E. Horne, Asim K. Bera, Cameron M. Chow +14 more

De novo designed proteins neutralize lethal snake venom toxins

Nature(2025)10.1038/s41586-024-08393-x

N/A

0DataRank · unranked

140 citations

Melisa Bénard-Valle, Stephen P. Mackessy, Stefanie K. Menzies, Nicholas R. Casewell, Shirin Ahmadi +28 more

Design of intrinsically disordered region binding proteins

Science(2025)10.1126/science.adr8063

N/A

0DataRank · unranked

82 citations

Hanlun Jiang, Derrick R. Hicks, Caixuan Liu, Edin Muratspahić, Theresa A. Ramelot +24 more

Cyclic peptide structure prediction and design using AlphaFold2

Nature Communications(2025)10.1038/s41467-025-59940-7

N/A

0DataRank · unranked

65 citations

Katelyn V. Campbell, Asim K. Bera, Alex Kang, Simon Kozlov, Yensi Flores Bueso +12 more

Tuning insulin receptor signaling using de novo-designed agonists

Molecular Cell(2025)10.1016/j.molcel.2025.09.020

N/A

0DataRank · unranked

15 citations

Sarah Cardoso, Kaiyong Cai, Preetham Venkatesh, Albert Hung, Michelle Ng +15 more

Designed miniproteins potently inhibit and protect against MERS-CoV

Cell Reports(2025)10.1016/j.celrep.2025.115760

N/A

0DataRank · unranked

12 citations

M. Alejandra Tortorici, Nicholas J. Catanzaro, Amin Addetia, Brian Coventry, Heather M. Froggatt +18 more

De Novo Design of Integrin α5β1 Modulating Proteins to Enhance Biomaterial Properties

Advanced Materials(2025)10.1002/adma.202500872

N/A

0DataRank · unranked

7 citations

Jordi Guillem‐Marti, Saurav Kumar, David Lee, Daniel Cabrerizo‐Aguado, R. Werther +21 more

De Novo Design of High‐Affinity Miniprotein Binders Targeting Francisella Tularensis Virulence Factor

Angewandte Chemie International Edition(2025)10.1002/anie.202516058

N/A

0DataRank · unranked

2 citations

Buwei Huang, Andi Liu, Lieselotte S.M. Kreuk, Yaxi Wang, Victor Adebomi +14 more

Designed NGF mimetics with reduced nociceptive signatures in neurons

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.14.648806

N/A

0DataRank · unranked

6 citations

Aerin Yang, Damien Detraux, David E. Johnson, Chloe J. Peach, Natasha I. Edman +30 more

De Novo Design of Integrin α5β1 Modulating Proteins for Regenerative Medicine

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.21.600123

N/A

0DataRank · unranked

2 citations

Jordi Guillem‐Marti, Saurav Kumar, David Lee, Daniel Cabrerizo‐Aguado, R. Werther +21 more

De novo design of transmembrane β barrels

Science(2021)10.1126/science.abc8182

N/A

0DataRank · unranked

156 citations

Paul White, Binyong Liang, Jim E. Horne, Asim K. Bera, Cameron M. Chow +14 more

De novo design of high-affinity binders of bioactive helical peptides

Nature(2023)10.1038/s41586-023-06953-1

N/A

0DataRank · unranked

230 citations

Philip J. Y. Leung, Preetham Venkatesh, Isaac D. Lutz, Fabian Hink, Huu‐Hien Huynh +25 more

Design of stimulus-responsive two-state hinge proteins

Science(2023)10.1126/science.adg7731

N/A

0DataRank · unranked

91 citations

Philip J. Y. Leung, Maxx H. Tessmer, Adam Broerman, Cullen Demakis, Acacia F. Dishman +18 more

Design of Diverse Asymmetric Pockets in De Novo Homo-oligomeric Proteins

Biochemistry(2023)10.1021/acs.biochem.2c00497

N/A

0DataRank · unranked

5 citations

Andrew J. Borst, Derrick R. Hicks, Isabelle Moczygemba, David Feldman, Brian Coventry +7 more

Modulation of FGF pathway signaling and vascular differentiation using designed oligomeric assemblies

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.14.532666

N/A

0DataRank · unranked

10 citations

Rachel L. Redler, Ashish Phal, Thomas Schlichthaerle, Sanjay Srivatsan, Ali Etemadi +27 more

Modulation of FGF pathway signaling and vascular differentiation using designed oligomeric assemblies

Cell(2024)10.1016/j.cell.2024.05.025

N/A

0DataRank · unranked

56 citations

Ashish Phal, Rachel L. Redler, Thomas Schlichthaerle, Sanjay Srivatsan, Devon Duron Ehnes +35 more