Cole A. DeForest

California Institute for Regenerative Medicine

Also affiliated with University of Washington, Regenerative Medicine Institute, University of Washington Applied Physics Laboratory, Bioengineering Center, Seattle University

EngineeringBiochemistry, Genetics and Molecular BiologyChemistry

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 40 papers. Top paper: “Magnetically-propelled fecal surrogates for modeling the impact of solid-induced shear forces on primary colonic epithelial cells”.

Magnetically-propelled fecal surrogates for modeling the impact of solid-induced shear forces on primary colonic epithelial cells

Biomaterials(2021)10.1016/j.biomaterials.2021.121059

N/A

0.330DataRank · unranked

8 citations

Jennifer Huling, Yuli Wang, Hao Wang, Ross C. Bretherton, Cole A. DeForest +2 more

Correcting dilated cardiomyopathy with fibroblast-targeted p38 deficiency

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.23.523684

N/A

0.308DataRank · unranked

5 citations

Isabella M. Reichardt, Kristin A. Zabrecky, Alex J. Goldstein, Logan R.J. Bailey, Darrian Bugg +14 more

Layer-by-layer fabrication of 3D hydrogel structures using open microfluidics

Lab on a Chip(2020)10.1039/c9lc00621d

N/A

0DataRank · unranked

54 citations

John H. Day, Amanda J. Haack, Ross C. Bretherton, Wenbo Lu, Cole A. DeForest +3 more

Engineering Heart Morphogenesis

Trends in biotechnology(2020)10.1016/j.tibtech.2020.01.006

N/A

0DataRank · unranked

20 citations

Nisa P. Williams, Ivan Batalov, Danny El‐Nachef, Bernadette S. de Bakker, Jennifer Davis +6 more

Targeting drug delivery with light: A highly focused approach

Advanced Drug Delivery Reviews(2021)10.1016/j.addr.2021.01.009

N/A

0DataRank · unranked

167 citations

Cole A. DeForest, Teresa L. Rapp

Photopatterned biomolecule immobilization to guide three-dimensional cell fate in natural protein-based hydrogels

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2014194118

N/A

0DataRank · unranked

85 citations

Kelly R. Stevens, Cole A. DeForest, Ivan Batalov

Magnetically-Propelled Fecal Surrogates for Modeling the Impact of Solid-Induced Shear Forces on Primary Colonic Epithelial Cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.18.431336

N/A

0DataRank · unranked

1 citations

Jennifer Huling, Yuli Wang, Hao Wang, Ross C. Bretherton, Cole A. DeForest +2 more

Fibroblast State Reversal By MBNL1-Dependent Transcriptome Modification Regulates Cardiac Repair

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.26.428279

N/A

0DataRank · unranked

0 citations

Ross C. Bretherton, Kylie E Beach, Anna Reese, Jagadambika Gunaje, Galina Flint +4 more

Tricolor Visible Wavelength-selective Photodegradable Hydrogel Biomaterials

ChemRxiv(2022)10.26434/chemrxiv-2022-hlbk6

N/A

0DataRank · unranked

4 citations

Cole A. DeForest, Teresa L. Rapp

Tricolor visible wavelength-selective photodegradable hydrogel biomaterials

Nature Communications(2023)10.1038/s41467-023-40805-w

N/A

0DataRank · unranked

59 citations

Cole A. DeForest, Teresa L. Rapp

Chemical and biological engineering strategies to make and modify next-generation hydrogel biomaterials

Matter(2023)10.1016/j.matt.2023.10.012

N/A

0DataRank · unranked

52 citations

Ryan M. Francis, Cole A. DeForest, Ryan Gharios

Spatiotemporal functional assembly of split protein pairs through a light-activated SpyLigation

Nature Chemistry(2023)10.1038/s41557-023-01152-x

N/A

0DataRank · unranked

43 citations

Brizzia G. Munoz‐Robles, A. Strange, Carson H. Butcher, Sebastian Kurniawan, Jeremy R. Filteau +2 more

4D Biochemical Photocustomization of Hydrogel Scaffolds for Biomimetic Tissue Engineering

Accounts of Materials Research(2023)10.1021/accountsmr.3c00062

N/A

0DataRank · unranked

21 citations

Cole A. DeForest, Ryan M. Francis

User‐Controlled 4D Biomaterial Degradation with Substrate‐Selective Sortase Transpeptidases for Single‐Cell Biology

Advanced Materials(2023)10.1002/adma.202209904

N/A

0DataRank · unranked

26 citations

Amanda J. Haack, Irina Kopyeva, Fariha Rahman, Jonah D. Kern, Darrian Bugg +4 more

Pharmacological regulation of protein-polymer hydrogel stiffness

RSC Advances(2023)10.1039/d3ra04046a

N/A

0DataRank · unranked

5 citations

Ross C. Bretherton, Jennifer Davis, Cole A. DeForest, Kunlin Wu

Highly Parallel Tissue Grafting for Combinatorial In Vivo Screening

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.16.533029

N/A

0DataRank · unranked

1 citations

Anna Neufeld, Chelsea L. Fortin, Fredrik Johansson, Jonathan Mene, Sarah H. Saxton +7 more

Genetically Encoded XTEN‐based Hydrogels with Tunable Viscoelasticity and Biodegradability for Injectable Cell Therapies

Advanced Science(2024)10.1002/advs.202301708

N/A

0DataRank · unranked

22 citations

Mary O’Kelly Boit, Nicole E. Gregorio, Fan Zhang, Ryan D. Kibler, Jack W. Hoye +6 more

Versatile Tissue-Injectable Hydrogels with Extended Hydrolytic Release of Bioactive Protein Therapeutics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.01.554391

N/A

0DataRank · unranked

0 citations

Jim Reed, Steve M. Adelmund, Barry A. Badeau, Jared A. Shadish, Emily J. Girard +8 more

De novo design of modular protein hydrogels with programmable intra- and extracellular viscoelasticity

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2309457121

N/A

0DataRank · unranked

58 citations

Ross C. Bretherton, Justin Decarreau, Sangmin Lee, Nicole E. Gregorio, Natasha I. Edman +9 more

Light-based fabrication and 4D customization of hydrogel biomaterials

Nature Reviews Bioengineering(2024)10.1038/s44222-024-00234-w

N/A

0DataRank · unranked

51 citations

Ryan Brady, Cole A. DeForest, Irina Kopyeva

Stepwise Stiffening/Softening of and Cell Recovery from Reversibly Formulated Hydrogel Interpenetrating Networks

Advanced Materials(2024)10.1002/adma.202404880

N/A

0DataRank · unranked

27 citations

Ethan C. Goldner, Jack W. Hoye, Shiyu Yang, Mary C. Regier, John C Bradford +5 more

Engineering native biological complexity from the inside–out and outside–in

Nature Chemical Engineering(2024)10.1038/s44286-023-00013-1

N/A

0DataRank · unranked

13 citations

Bruce E. Kirkpatrick, Kristi S. Anseth, Cole A. DeForest

Bioluminescence Resonance Energy Transfer (BRET)-Mediated Protein Release from Self-Illuminating Photoresponsive Biomaterials

Journal of the American Chemical Society(2024)10.1021/jacs.4c03361

N/A

0DataRank · unranked

13 citations

Irina Kopyeva, Abhinav Adhikari, Cole A. DeForest, Teresa L. Rapp

Versatile tissue‐injectable hydrogels capable of the extended hydrolytic release of bioactive protein therapeutics

Bioengineering & Translational Medicine(2024)10.1002/btm2.10668

N/A

0DataRank · unranked

6 citations

Jim Reed, Steven M. Adelmund, Barry A. Badeau, Jared A. Shadish, Emily J. Girard +9 more

Irreversible light-activated SpyLigation mediates split-protein assembly in 4D

Nature Protocols(2024)10.1038/s41596-023-00938-0

N/A

0DataRank · unranked

6 citations

Cole A. DeForest, Brizzia G. Munoz‐Robles

One-Step Purification and N-Terminal Functionalization of Bioactive Proteins via Atypically Split Inteins

Bioconjugate Chemistry(2024)10.1021/acs.bioconjchem.4c00223

N/A

0DataRank · unranked

1 citations

A. Li, Irina Kopyeva, Ryan M. Francis, Cole A. DeForest, Ryan Gharios

Grayscale 4D Biomaterial Customization at High Resolution and Scale

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.31.578280

N/A

0DataRank · unranked

7 citations

Jeremy R. Filteau, Ryan M. Francis, Georg Jaindl, Luke Orr, Teresa L. Rapp +9 more

PhoCoil: An Injectable and Photodegradable Single-component Recombinant Protein Hydrogel for Localized Therapeutic Cell Delivery

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.05.07.592971

N/A

0DataRank · unranked

6 citations

Cole A. DeForest, Nicole E. Gregorio

De Novo Design of Integrin α5β1 Modulating Proteins for Regenerative Medicine

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.21.600123

N/A

0DataRank · unranked

2 citations

Jordi Guillem‐Marti, Saurav Kumar, David Lee, Daniel Cabrerizo‐Aguado, R. Werther +21 more

Stepwise Stiffening/Softening of and Cell Recovery from Reversibly Formulated Hydrogel Double Networks

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.04.588191

N/A

0DataRank · unranked

0 citations

Ethan C. Goldner, Jack W. Hoye, Shiyu Yang, Mary C. Regier, Kaitlyn R. Vera +3 more

Suspended Tissue Open Microfluidic Patterning (STOMP)

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.04.616662

N/A

0DataRank · unranked

0 citations

Lauren G. Brown, Alex J. Goldstein, Priti Mulimani, Jean Berthier, Asha R. Viswanathan +18 more

Preventing hypocontractility-induced fibroblast expansion alleviates dilated cardiomyopathy

Science(2025)10.1126/science.adv9157

N/A

0DataRank · unranked

9 citations

Isabella M. Reichardt, Kristin A. Zabrecky, Abigail Nagle, Logan R.J. Bailey, Darrian Bugg +17 more

From sequence to scaffold: Computational design of protein nanoparticle vaccines from AlphaFold2-predicted building blocks

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2409566122

N/A

0DataRank · unranked

8 citations

Naveen Jasti, Annie Dosey, Joel D. Allen, Rebecca A. Gillespie, Jackson McGowan +6 more

De Novo Design of Integrin α5β1 Modulating Proteins to Enhance Biomaterial Properties

Advanced Materials(2025)10.1002/adma.202500872

N/A

0DataRank · unranked

7 citations

Jordi Guillem‐Marti, Saurav Kumar, David Lee, Daniel Cabrerizo‐Aguado, R. Werther +21 more

Suspended Tissue Open Microfluidic Patterning (STOMP)

Advanced Science(2025)10.1002/advs.202501148

N/A

0DataRank · unranked

6 citations

Lauren G. Brown, Alex J. Goldstein, Priti Mulimani, Jean Berthier, Asha R. Viswanathan +18 more

Rapid and Inexpensive Image‐Guided Grayscale Biomaterial Customization via LCD Printing

Journal of Biomedical Materials Research Part A(2025)10.1002/jbm.a.37897

N/A

0DataRank · unranked

2 citations

Irina Kopyeva, Nicholas Lai, Shiyu Yang, Jeremy R. Filteau, Xinru Wang +3 more

Bioprinted platform for parallelized screening of engineered microtissues in vivo

Cell stem cell(2025)10.1016/j.stem.2025.03.002

N/A

0DataRank · unranked

2 citations

Fan Zhang, Anna Neufeld, Olivia Prado, Susana P. Simmonds, Chelsea L. Fortin +11 more

Biophysical and biomolecular interactions of malaria-infected erythrocytes in engineered human capillaries

Science Advances(2020)10.1126/sciadv.aay7243

N/A

0DataRank · unranked

101 citations

Celina Gunnarsson, Caitlin Howard, Maria Bernabeu, Kiet T. Phong, Eric Yang +4 more

From sequence to scaffold: computational design of protein nanoparticle vaccines from AlphaFold2-predicted building blocks

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.20.671178

N/A

0DataRank · unranked

0 citations

Naveen Jasti, Annie Dosey, Joel D. Allen, Rebecca A. Gillespie, Jackson McGowan +6 more

Self‐healing injectable gelatin hydrogels for localized therapeutic cell delivery

Journal of Biomedical Materials Research Part A(2020)10.1002/jbm.a.36886

N/A

0DataRank · unranked

91 citations

Mary O’Kelly Boit, Cole A. DeForest, Arbel M. Sisso