Thomas H. Hampton

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile

0.830Author DataRank

Indexed papers

3in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 3 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses

mSystems(2021)10.1128/msystems.01305-20

Top 42%

0.446DataRank

Top 42%18 citations

Katja Koeppen, Victoria Holden, Samuel L. Neff, Liviu Cengher, Elora G. Demers +4 more

Papers

Driven by 44 papers — median percentile 53. Top paper: “Pseudomonas aeruginosa lasR mutant fitness in microoxia is supported by an Anr-regulated oxygen-binding hemerythrin”.

Pseudomonas aeruginosa lasR mutant fitness in microoxia is supported by an Anr-regulated oxygen-binding hemerythrin

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1917576117

N/A

1.4DataRank · unranked

69 citations

John H. Hammond, Fangfang Zhong, Xiaolei Chen, Caitlin H. Kowalski, Alexandra J. Lee +6 more

Comparative effects of CFTR modulators on phagocytic, metabolic and inflammatory profiles of CF and nonCF macrophages

Scientific Reports(2023)10.1038/s41598-023-38300-9

N/A

0.784DataRank · unranked

19 citations

Diane Mellinger, L. Gwilt, Thomas H. Hampton, Dallas L. Mould, Deborah A. Hogan +2 more

Community composition shapes microbial-specific phenotypes in a cystic fibrosis polymicrobial model system

eLife(2023)10.7554/elife.81604

N/A

0.639DataRank · unranked

70 citations

Thomas H. Hampton, Daniel Schultz, Deborah A. Hogan, Marie‐Christine Groleau, Éric Déziel +2 more

Let-7b-5p in vesicles secreted by human airway cells reduces biofilm formation and increases antibiotic sensitivity of P. aeruginosa

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2105370118

N/A

0.621DataRank · unranked

62 citations

Amanda Nymon, BRUCE A. STANTON, Laura Bashor, Zhongyou Li, Thomas H. Hampton +8 more

Model Systems to Study the Chronic, Polymicrobial Infections in Cystic Fibrosis: Current Approaches and Exploring Future Directions

mBio(2021)10.1128/mbio.01763-21

N/A

0.612DataRank · unranked

58 citations

Aurélie Crabbé, Rolf Kümmerli, John J. LiPuma, Jennifer M. Bomberger, Jane C. Davies +33 more

Healthyversusinflamed lung environments differentially affect mesenchymal stromal cells

European Respiratory Journal(2021)10.1183/13993003.04149-2020

N/A

0.550DataRank · unranked

38 citations

Thomas H. Hampton, Jayita Barua, David H. McKenna, Claúdia C. dos Santos, Eyal Amiel +9 more

Altered iron metabolism in cystic fibrosis macrophages: the impact of CFTR modulators and implications for Pseudomonas aeruginosa survival

Scientific Reports(2020)10.1038/s41598-020-67729-5

N/A

0.542DataRank · unranked

36 citations

Thomas H. Hampton, Daniel Aridgides, David A. Armstrong, John A. Dessaint, Diane Mellinger +3 more

Mild Cystic Fibrosis Lung Disease Is Associated with Bacterial Community Stability

Microbiology Spectrum(2021)10.1128/spectrum.00029-21

N/A

0.520DataRank · unranked

31 citations

Devin Thomas, Chris Gast, George A. O'Toole, BRUCE A. STANTON, Thomas H. Hampton

GAUGE-Annotated Microbial Transcriptomic Data Facilitate Parallel Mining and High-Throughput Reanalysis To Form Data-Driven Hypotheses

mSystems(2021)10.1128/msystems.01305-20

Top 42%

0.446DataRank

Top 42%18 citations

Katja Koeppen, Victoria Holden, Samuel L. Neff, Liviu Cengher, Elora G. Demers +4 more

P. aeruginosa tRNA-fMet halves secreted in outer membrane vesicles suppress lung inflammation in cystic fibrosis

American Journal of Physiology-Lung Cellular and Molecular Physiology(2024)10.1152/ajplung.00018.2024

N/A

0.437DataRank · unranked

13 citations

BRUCE A. STANTON, Amanda Nymon, Carolyn Roche, Katja Koeppen, Alix Ashare +5 more

CF monocyte-derived macrophages have an attenuated response to extracellular vesicles secreted by airway epithelial cells

American Journal of Physiology-Lung Cellular and Molecular Physiology(2021)10.1152/ajplung.00621.2020

N/A

0.434DataRank · unranked

17 citations

Amanda Nymon, BRUCE A. STANTON, Zhongyou Li, Thomas H. Hampton, Alix Ashare +1 more

Pseudomonas aeruginosa transcriptome analysis of metal restriction in ex vivo cystic fibrosis sputum

Microbiology Spectrum(2024)10.1128/spectrum.03157-23

N/A

0.417DataRank · unranked

10 citations

Georgia Doing, Taylor Reiter, Thomas H. Hampton, Casey S. Greene, Deborah A. Hogan +1 more

CF-Seq, an accessible web application for rapid re-analysis of cystic fibrosis pathogen RNA sequencing studies

Scientific Data(2022)10.1038/s41597-022-01431-1

Top 47%

0.385DataRank

Top 47%12 citations

Thomas H. Hampton, Charles Puerner, Liviu Cengher, Georgia Doing, Alexandra J. Lee +6 more

An in vitro medium for modeling gut dysbiosis associated with cystic fibrosis

Journal of Bacteriology(2024)10.1128/jb.00286-23

N/A

0.360DataRank · unranked

10 citations

Thomas H. Hampton, Rebecca A. Valls, Sarvesh Surve, Timothy B. Gardner, Julie L. Sanville +3 more

Rocket-miR, a translational launchpad for miRNA-based antimicrobial drug development

mSystems(2023)10.1128/msystems.00653-23

N/A

0.345DataRank · unranked

9 citations

Thomas H. Hampton, Katja Koeppen, Sharanya Sarkar, Casey J. Latario, Benjamin D. Ross +2 more

Extracellular Particles Derived from Mesenchymal Stromal Cells Reduce Pseudomonas aeruginosa Lung Infection and Inflammation in Mice

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.03.30.646208

N/A

0.269DataRank · unranked

5 citations

BRUCE A. STANTON, Zachary Faber, Lily Taub, Carolyn Roche, Lily A. Charpentier +10 more

Lung-kidney axis in cystic fibrosis: Early urinary markers of kidney injury correlate with neutrophil activation and worse lung function

Journal of Cystic Fibrosis(2025)10.1016/j.jcf.2024.12.007

N/A

0.241DataRank · unranked

4 citations

Himanshu Ballav Goswami, Katherine Sessions, Lindsay Mendyka, Brenna Kerin, Irma Vlasac +11 more

Acute respiratory distress vs healthy lung environments differently affect mesenchymal stromal cell extracellular vesicle miRNAs

Cytotherapy(2025)10.1016/j.jcyt.2025.01.006

N/A

0.208DataRank · unranked

3 citations

Irakli Dzneladze, Thomas H. Hampton, Samuel L. Neff, Lori Asarian, Jayita Barua +16 more

Community composition shapes microbial-specific phenotypes in a cystic fibrosis polymicrobial model system

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.23.497319

N/A

0.208DataRank · unranked

3 citations

Thomas H. Hampton, Daniel Schultz, Deborah A. Hogan, Marie‐Christine Groleau, Éric Déziel +2 more

Rocket-miR, a Translational Launchpad for miRNA-based Antimicrobial Drug Development

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.22.546111

N/A

0.104DataRank · unranked

1 citations

Thomas H. Hampton, Katja Koeppen, Sharanya Sarkar, Casey J. Latario, Benjamin D. Ross +2 more

An rRNA fragment in extracellular vesicles secreted by human airway epithelial cells increases the fluoroquinolone sensitivity of P. aeruginosa

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.19.488721

N/A

0.104DataRank · unranked

1 citations

Thomas H. Hampton, Scott A. Gerber, Young Ah Goo, Byoung-Kyu Cho, Danielle M. Vermilyea +3 more

Lung-Kidney Axis in Cystic Fibrosis: Early Urinary Markers of Kidney Injury Correlate with Neutrophil Activation and Worse Lung Function

medRxiv(2023)10.1101/2023.11.10.23298378

N/A

0.104DataRank · unranked

1 citations

Himanshu Ballav Goswami, Katherine Sessions, Lindsay Mendyka, Brenna Kerin, Irma Vlasac +11 more

E.PathDash, pathway activation analysis of publicly available pathogen gene expression data

mSystems(2024)10.1128/msystems.01030-24

N/A

0.104DataRank · unranked

1 citations

Thomas H. Hampton, Sharanya Sarkar, Georgia Doing, Samuel L. Neff, Carson Finger +3 more

Tryptophan mutations in G3BP1 tune the stability of a cellular signaling hub by weakening transient interactions with Caprin1 and USP10

Journal of Biological Chemistry(2022)10.1016/j.jbc.2022.102552

N/A

0DataRank · unranked

9 citations

Thomas H. Hampton, Dean R. Madden, Colin T. Sheehan

The Burkholderia cenocepacia type VI secretion system effector TecA is a virulence factor during lung infection

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.07.13.451912

N/A

0DataRank · unranked

0 citations

Andrew I. Perault, Peggy A. Cotter, Craig A. Hodges, Joseph D. Schwartzman, Thomas H. Hampton +2 more

PlmCas12e (CasX2) cleavage of CCR5: impact of guide RNA spacer length and PAM sequence on cleavage activity

RNA Biology(2023)10.1080/15476286.2023.2221510

N/A

0DataRank · unranked

5 citations

Taylor R. Hudson, Christine A. Hodge, Thomas H. Hampton, Alexandra L. Howell, Matthew S. Hayden +1 more

CAS12e (CASX2) CLEAVAGE OF CCR5: IMPACT OF GUIDE RNA LENGTH AND PAM SEQUENCE ON CLEAVAGE ACTIVITY

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.02.522476

N/A

0DataRank · unranked

2 citations

Taylor R. Hudson, Christine A. Hodge, Thomas H. Hampton, Alexandra L. Howell, Matthew S. Hayden +1 more

Mild CF Lung Disease is Associated with Bacterial Community Stability

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.23.436717

N/A

0DataRank · unranked

0 citations

Devin Thomas, Chris Gast, George A. O'Toole, BRUCE A. STANTON, Thomas H. Hampton

An In Vitro Medium for Modeling Gut Dysbiosis Associated with Cystic Fibrosis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.01.551570

N/A

0DataRank · unranked

1 citations

Thomas H. Hampton, Rebecca A. Valls, Sarvesh Surve, Timothy B. Gardner, Julie L. Sanville +3 more

Analysis of Pseudomonas aeruginosa transcription in an ex vivo cystic fibrosis sputum model identifies metal restriction as a gene expression stimulus

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.21.554169

N/A

0DataRank · unranked

0 citations

Georgia Doing, Taylor Reiter, Thomas H. Hampton, Casey S. Greene, Deborah A. Hogan +1 more

347 Early markers of chronic kidney disease in people with cystic fibrosis

Journal of Cystic Fibrosis(2023)10.1016/s1569-1993(23)01274-2

N/A

0DataRank · unranked

0 citations

Kristen L. Sessions, Himanshu Ballav Goswami, Diane Mellinger, L. Gwilt, Thomas H. Hampton +5 more

77 Rocket-miR, a translational launchpad for miRNA-based antimicrobial drug development

Journal of Cystic Fibrosis(2023)10.1016/s1569-1993(23)01012-3

N/A

0DataRank · unranked

0 citations

Thomas H. Hampton, Katja Koeppen, Sudipta Sarkar, Casey J. Latario, Brian D. Ross +2 more

200 RESPIRE: Searchable, downloadable multi-omic data sets for lung disease research

Journal of Cystic Fibrosis(2023)10.1016/s1569-1993(23)01130-x

Top 100%

0DataRank

Top 100%0 citations

Marina Rogers, Samuel Neff, Beckye Stanton, Thomas H. Hampton

APPLICATION OF QUANTILE DISCRETIZATION AND BAYESIAN NETWORK ANALYSIS TO PUBLICLY AVAILABLE CYSTIC FIBROSIS DATA SETS

PubMed(2023)10.1142/9789811286421_0041

N/A

0DataRank · unranked

0 citations

Thomas H. Hampton, Carly A. Bobak, Todd A. MacKenzie, BRUCE A. STANTON, Kiyoshi F. Fukutani

Gene expression responses of CF airway epithelial cells exposed to elexacaftor/tezacaftor/ivacaftor suggest benefits beyond improved CFTR channel function

American Journal of Physiology-Lung Cellular and Molecular Physiology(2024)10.1152/ajplung.00272.2024

N/A

0DataRank · unranked

19 citations

BRUCE A. STANTON, Carolyn Roche, Amanda Nymon, Kiyoshi F. Fukutani, Todd A. MacKenzie +2 more

One versus Many: Polymicrobial Communities and the Cystic Fibrosis Airway

mBio(2021)10.1128/mbio.00006-21

N/A

0DataRank · unranked

35 citations

Arsh Vyas, Thomas H. Hampton, Michael A. Henson, George A. O'Toole, Fabrice Jean-Pierre

Differential effects of the cystic fibrosis lung inflammatory environment on mesenchymal stromal cells

American Journal of Physiology-Lung Cellular and Molecular Physiology(2020)10.1152/ajplung.00218.2020

N/A

0DataRank · unranked

31 citations

Thomas H. Hampton, Evan T. Hoffman, Jacob Dearborn, Alix Ashare, Karatatiwant Singh Sidhu +19 more

Multivariable Linear Models Outperform 2-ΔΔCT for qPCR Data Analysis

Research Square(2025)10.21203/rs.3.rs-6014969/v1

N/A

0DataRank · unranked

2 citations

Lily Taub, Kiyoshi Ferreria-Fukutani, BRUCE A. STANTON, Todd A. MacKenzie, Thomas H. Hampton

P. aeruginosa tRNA-fMet halves secreted in outer membrane vesicles suppress lung inflammation in Cystic Fibrosis

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.03.578737

N/A

0DataRank · unranked

0 citations

BRUCE A. STANTON, Amanda Nymon, Carolyn Roche, Katja Koeppen, Alix Ashare +5 more

Single-cell RNA-seq Analysis Reveals That Prenatal Arsenic Exposure Results in Long-term, Adverse Effects on Immune Gene Expression in Response to Influenza A Infection

Toxicological Sciences(2020)10.1093/toxsci/kfaa080

N/A

0DataRank · unranked

20 citations

Britton C. Goodale, Kenneth H. Ely, Thomas H. Hampton, BRUCE A. STANTON, Richard I. Enelow +1 more

Analyzing qPCR data: Better practices to facilitate rigor and reproducibility

Biochemistry and Biophysics Reports(2025)10.1016/j.bbrep.2025.102356

N/A

0DataRank · unranked

4 citations

Lily Taub, Kiyoshi Ferreria-Fukutani, BRUCE A. STANTON, Todd A. MacKenzie, Thomas H. Hampton

Specificity in PDZ-peptide interaction networks: Computational analysis and review

Journal of Structural Biology X(2020)10.1016/j.yjsbx.2020.100022

N/A

0DataRank · unranked

64 citations

Lionel Brooks, Thomas H. Hampton, Dean R. Madden, Jeanine F. Amacher

Predicting Clinical Outcomes in Infants With Cystic Fibrosis From Stool Microbiota using Random Forest Algorithms

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.06.503028

N/A

0DataRank · unranked

0 citations

Thomas H. Hampton, Courtney E. Price, Kaitlyn E. Barrack, George A. O'Toole, Modupe O. Coker +2 more

Development of the intestinal microbiome in cystic fibrosis in early life

mSphere(2023)10.1128/msphere.00046-23

N/A

0DataRank · unranked

24 citations

Thomas H. Hampton, Rebecca Valls, Kaitlyn E. Barrack, George A. O'Toole, Juliette C. Madan +2 more

Thomas H. Hampton

Indexed papers

Top data-sharing exemplar

Papers