Joseph M. Paggi

Also affiliated with Massachusetts Institute of Technology

NeuroscienceBiochemistry, Genetics and Molecular BiologyComputer Science

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 10 papers. Top paper: “Structural and functional characterization of G protein–coupled receptors with deep mutational scanning”.

Structural and functional characterization of G protein–coupled receptors with deep mutational scanning

eLife(2020)10.7554/elife.54895

N/A

3.9DataRank · unranked

176 citations

Nathan B. Lubock, AJ Venkatakrishnan, Jeffrey Wang, Alex M. Tseng, Joseph M. Paggi +8 more

Graph-based genome alignment and genotyping with HISAT2 and HISAT-genotype

Nature Biotechnology(2019)10.1038/s41587-019-0201-4

N/A

1.4DataRank · unranked

15249 citations

Joseph M. Paggi, Chanhee Park, Christopher Bennett, Steven L. Salzberg, Daehwan Kim

A non-canonical mechanism of GPCR activation

Nature Communications(2024)10.1038/s41467-024-54103-6

N/A

0.696DataRank · unranked

21 citations

Aasma Khan, Joseph M. Paggi, Naomi R. Latorraca, Sarah Souza, Jerry Di Salvo +6 more

A non-canonical mechanism of GPCR activation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.14.553154

N/A

0.165DataRank · unranked

2 citations

Aasma Khan, Joseph M. Paggi, Naomi R. Latorraca, Sarah Souza, Jerry Di Salvo +6 more

Geometric Deep Learning for Structure-Based Ligand Design

ACS Central Science(2023)10.1021/acscentsci.3c00572

N/A

0DataRank · unranked

43 citations

Helen H. Yu, Patricia Suriana, Rohan V. Koodli, Tianyu Lu, Joseph M. Paggi +2 more

Toward decoding the mechanisms that shape sub-megabase-scale genome organization

Current Opinion in Structural Biology(2025)10.1016/j.sbi.2025.103062

N/A

0DataRank · unranked

4 citations

Bin Zhang, Joseph M. Paggi

Euchromatin forms condensed domains with short active regions on the surface

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.05.668703

N/A

0DataRank · unranked

8 citations

Bin Zhang, Joseph M. Paggi

Leveraging non-structural data to predict structures of protein–ligand complexes

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.01.128181

N/A

0DataRank · unranked

3 citations

Julia A. Belk, Scott A. Hollingsworth, Nicolas Villanueva, Alexander S. Powers, Mary J. Clark +6 more

Structural insights into distinct signaling profiles of the μOR activated by diverse agonists

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.07.471645

N/A

0DataRank · unranked

6 citations

Weijiao Huang, Deniz Aydın, Joseph M. Paggi, Alpay B. Seven, Haoqing Wang +11 more

Molecular mechanism of biased signaling at the kappa opioid receptor

Nature Communications(2023)10.1038/s41467-023-37041-7

N/A

0DataRank · unranked

98 citations

Joseph M. Paggi, Kuglae Kim, Yianni Laloudakis, Petr Popov, Sarah M. Bernhard +9 more