Gira Bhabha

Biochemistry, Genetics and Molecular BiologyImmunology and Microbiology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 53 papers. Top paper: “LetB Structure Reveals a Tunnel for Lipid Transport across the Bacterial Envelope”.

LetB Structure Reveals a Tunnel for Lipid Transport across the Bacterial Envelope

Cell(2020)10.1016/j.cell.2020.03.030

N/A

2.2DataRank · unranked

70 citations

Nicolas Coudray, Mark R. MacRae, C.T. McManus, Damian C. Ekiert, Gira Bhabha +1 more

Structure of MlaFB uncovers novel mechanisms of ABC transporter regulation

eLife(2020)10.7554/elife.60030

N/A

1.5DataRank · unranked

44 citations

Ya‐Ting Chang, Nicolas Coudray, Sabrina I. Giacometti, Mark R. MacRae, Georgia L. Isom +4 more

The Spike D614G mutation increases SARS-CoV-2 infection of multiple human cell types

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.14.151357

N/A

0.722DataRank · unranked

122 citations

Tristan X. Jordan, Juliana K. Ilmain, Xinyi Guo, Gira Bhabha, Benjamin R. tenOever +2 more

Design of multi-scale protein complexes by hierarchical building block fusion

Nature Communications(2021)10.1038/s41467-021-22276-z

N/A

0.678DataRank · unranked

91 citations

Rubul Mout, William Sheffler, Natasha I. Edman, Ivan Vulovic, Young‐Jun Park +15 more

Structure of bacterial phospholipid transporter MlaFEDB with substrate bound

eLife(2020)10.7554/elife.62518

N/A

0.657DataRank · unranked

79 citations

Georgia L. Isom, Mark R. MacRae, Mariyah N. Saiduddin, Gira Bhabha, Damian C. Ekiert +1 more

Blueprinting extendable nanomaterials with standardized protein blocks

Nature(2024)10.1038/s41586-024-07188-4

N/A

0.624DataRank · unranked

63 citations

Yang Hsia, Ryan D. Kibler, Jinwei Xu, Neville P. Bethel, Deepesh Nagarajan +27 more

Lipid Transport Across Bacterial Membranes

Annual Review of Cell and Developmental Biology(2022)10.1146/annurev-cellbio-120420-022914

N/A

0.529DataRank · unranked

33 citations

Mark R. MacRae, Kristen Dancel-Manning, Gira Bhabha, Damian C. Ekiert, Sabrina I. Giacometti

Structure and mechanism of the bacterial lipid ABC transporter, MlaFEDB

Current Opinion in Structural Biology(2022)10.1016/j.sbi.2022.102429

N/A

0.483DataRank · unranked

24 citations

Nicolas Coudray, Gira Bhabha, Damian C. Ekiert

Energetics of the microsporidian polar tube invasion machinery

eLife(2023)10.7554/elife.86638

N/A

0.385DataRank · unranked

12 citations

А. В. Давыдов, Pattana Jaroenlak, Breane Budaitis, Damian C. Ekiert, Gira Bhabha +2 more

Role of Ring6 in the Function of the E. coli MCE Protein LetB

Journal of Molecular Biology(2022)10.1016/j.jmb.2022.167463

N/A

0.369DataRank · unranked

7 citations

Nicolas Coudray, Georgia L. Isom, Gira Bhabha, Damian C. Ekiert, Casey Vieni

Structure of an endogenous mycobacterial MCE lipid transporter

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.08.519548

N/A

0.345DataRank · unranked

9 citations

Alice Fruhauf, Catherine Fan, Jackeline Ponce, Beatrix Ueberheide, Gira Bhabha +2 more

Phospholipid transport to the bacterial outer membrane through an envelope-spanning bridge

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.05.561070

N/A

0.345DataRank · unranked

9 citations

Robert L. Clark, Anju Kudhail, Gira Bhabha, Damian C. Ekiert, Syma Khalid +2 more

Hierarchical design of multi-scale protein complexes by combinatorial assembly of oligomeric helical bundle and repeat protein building blocks

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.27.221333

N/A

0.330DataRank · unranked

8 citations

Rubul Mout, William Sheffler, Natasha I. Edman, Ivan Vulovic, Young‐Jun Park +15 more

Structure of MlaFB uncovers novel mechanisms of ABC transporter regulation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.27.064196

N/A

0.269DataRank · unranked

5 citations

Ya‐Ting Chang, Nicolas Coudray, Sabrina I. Giacometti, Mark R. MacRae, Georgia L. Isom +4 more

Conformational states of the microtubule nucleator, the γ-tubulin ring complex

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.19.572162

N/A

0.241DataRank · unranked

4 citations

Sophie M. Travis, Brian P. Mahon, C.T. McManus, Philip D. Jeffrey, Nicolas Coudray +6 more

Structure of an endogenous mycobacterial MCE lipid transporter

Nature(2023)10.1038/s41586-023-06366-0

N/A

0DataRank · unranked

58 citations

Alice Fruhauf, Catherine Fan, Jackeline Ponce, Beatrix Ueberheide, Gira Bhabha +2 more

3D reconstructions of parasite development and the intracellular niche of the microsporidian pathogen Encephalitozoon intestinalis

Nature Communications(2023)10.1038/s41467-023-43215-0

N/A

0DataRank · unranked

26 citations

Miu-Ling Lam, А. В. Давыдов, Margot Riggi, Joseph Sall, Christopher J. Petzold +5 more

Protein target highlights in CASP15 : Analysis of models by structure providers

Proteins Structure Function and Bioinformatics(2023)10.1002/prot.26545

N/A

0DataRank · unranked

35 citations

Janani Durairaj, Andriy Kryshtafovych, Luciano A. Abriata, Yusupha Bayo, Gira Bhabha +46 more

Protein–protein interactions in the Mla lipid transport system probed by computational structure prediction and deep mutational scanning

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.104744

N/A

0DataRank · unranked

25 citations

Dhenesh Puvanendran, Max A. B. Haase, Nicolas Coudray, Ljuvica Kolich, Cherry Lam +4 more

Unlatching of the stem domains in the Staphylococcus aureus pore-forming leukocidin LukAB influences toxin oligomerization

Journal of Biological Chemistry(2023)10.1016/j.jbc.2023.105321

N/A

0DataRank · unranked

1 citations

Sofya S. Perelman, Maria C. Panepinto, Irnov Irnov, Nicolas Coudray, Nora M. Samhadaneh +6 more

Modulation of FGF pathway signaling and vascular differentiation using designed oligomeric assemblies

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.14.532666

N/A

0DataRank · unranked

10 citations

Rachel L. Redler, Ashish Phal, Thomas Schlichthaerle, Sanjay Srivatsan, Ali Etemadi +27 more

Structure of an endogenous mycobacterial MCE lipid transporter

Research Square(2023)10.21203/rs.3.rs-2412186/v1

N/A

0DataRank · unranked

9 citations

Alice Fruhauf, Catherine Fan, Jackeline Ponce, Beatrix Ueberheide, Gira Bhabha +2 more

Blueprinting expandable nanomaterials with standardized protein building blocks

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.09.544258

N/A

0DataRank · unranked

6 citations

Yang Hsia, Ryan D. Kibler, Jinwei Xu, Neville P. Bethel, Deepesh Nagarajan +26 more

Energetics of the Microsporidian Polar Tube Invasion Machinery

(2023)10.7554/elife.86638.1

N/A

0DataRank · unranked

2 citations

А. В. Давыдов, Pattana Jaroenlak, Breane Budaitis, Damian C. Ekiert, Gira Bhabha +2 more

Sample preparation and data collection for Serial Block Face Scanning Electron Microscopy of Mammalian Cell Monolayers

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.26.559595

N/A

0DataRank · unranked

2 citations

Joseph Sall, Christopher J. Petzold, Damian C. Ekiert, Gira Bhabha, Feng-Xia Liang +1 more

De novo design of energy transfer proteins housing excitonically coupled chlorophyll special pairs

Research Square(2023)10.21203/rs.3.rs-2736786/v1

N/A

0DataRank · unranked

0 citations

Shunzhi Wang, Madison Kennedy, Mariano Curti, George A. Sutherland, Cvetelin Vasilev +25 more

Reviewer #2 (Public Review): Energetics of the Microsporidian Polar Tube Invasion Machinery

(2023)10.7554/elife.86638.1.sa1

N/A

0DataRank · unranked

0 citations

Ari Davydov, Pattana Jaroenlak, Breane Budaitis, Damian C. Ekiert, Gira Bhabha +2 more

Reviewer #1 (Public Review): Energetics of the Microsporidian Polar Tube Invasion Machinery

(2023)10.7554/elife.86638.2.sa1

N/A

0DataRank · unranked

0 citations

А. В. Давыдов, Pattana Jaroenlak, Breane Budaitis, Damian C. Ekiert, Gira Bhabha +2 more

Sample preparation and data collection for Serial Block Face Scanning Electron Microscopy of Mammalian Cell Monolayers v1

(2023)10.17504/protocols.io.e6nvwdz5zlmk/v1

N/A

0DataRank · unranked

0 citations

Joseph Sall, Christopher Petzold, Damian C. Ekiert, Gira Bhabha, Feng-xia Liang +1 more

Energetics of the Microsporidian Polar Tube Invasion Machinery

(2023)10.7554/elife.86638.2

N/A

0DataRank · unranked

0 citations

А. В. Давыдов, Pattana Jaroenlak, Breane Budaitis, Damian C. Ekiert, Gira Bhabha +2 more

Modulation of FGF pathway signaling and vascular differentiation using designed oligomeric assemblies

Cell(2024)10.1016/j.cell.2024.05.025

N/A

0DataRank · unranked

56 citations

Ashish Phal, Rachel L. Redler, Thomas Schlichthaerle, Sanjay Srivatsan, Devon Duron Ehnes +35 more

De novo design of proteins housing excitonically coupled chlorophyll special pairs

Nature Chemical Biology(2024)10.1038/s41589-024-01626-0

N/A

0DataRank · unranked

29 citations

Shunzhi Wang, Madison Kennedy, Mariano Curti, George A. Sutherland, Cvetelin Vasilev +26 more

Identification of a depupylation regulator for an essential enzyme in Mycobacterium tuberculosis

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2407239121

N/A

0DataRank · unranked

5 citations

Jin Hee Yoo, James Chen, Kehilwe C. Nakedi, Lakshminarayan M. Iyer, Gregory Putzel +8 more

Sample preparation and data collection for serial block face scanning electron microscopy of mammalian cell monolayers

PLoS ONE(2024)10.1371/journal.pone.0301284

N/A

0DataRank · unranked

2 citations

Joseph Sall, Christopher J. Petzold, Damian C. Ekiert, Gira Bhabha, Feng-Xia Liang +1 more

Bond-centric modular design of protein assemblies

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.10.11.617872

N/A

0DataRank · unranked

1 citations

Andrew Favor, Ryan D. Kibler, Joshua M. Lubner, Andrew J. Borst, Nicolas Coudray +10 more

Sample preparation and data collection for Serial Block Face Scanning Electron Microscopy of Mammalian Cell Monolayers v2

(2024)10.17504/protocols.io.e6nvwdz5zlmk/v2

N/A

0DataRank · unranked

0 citations

Joseph Sall, Christopher J. Petzold, Damian C. Ekiert, Gira Bhabha, Feng-Xia Liang +1 more

Bond-centric modular design of protein assemblies

Nature Materials(2025)10.1038/s41563-025-02297-5

N/A

0DataRank · unranked

19 citations

Andrew Favor, Ryan D. Kibler, Joshua M. Lubner, Andrew J. Borst, Nicolas Coudray +11 more

Adenosine deaminase and deoxyadenosine regulate intracellular immune response in C. elegans

iScience(2025)10.1016/j.isci.2025.111950

N/A

0DataRank · unranked

8 citations

Eillen Tecle, Mario Bardan Sarmiento, Cheng‐Ju Kuo, Crystal B. Chhan, Ian Baick +8 more

scRNA-seq uncovers the transcriptional dynamics of Encephalitozoon intestinalis parasites in human macrophages

Nature Communications(2025)10.1038/s41467-025-57837-z

N/A

0DataRank · unranked

6 citations

Kacie L McCarty, Bo Xia, Miu-Ling Lam, Erin E. Zwack, Nadia L Almasri +6 more

3-Dimensional organization and dynamics of the microsporidian polar tube invasion machinery

PLoS Pathogens(2020)10.1371/journal.ppat.1008738

N/A

0DataRank · unranked

56 citations

Michael Cammer, А. В. Давыдов, Joseph Sall, Mahrukh Usmani, Feng-Xia Liang +3 more

Waffle Method: A general and flexible approach for improving throughput in FIB-milling

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.28.359372

N/A

0DataRank · unranked

14 citations

Ashleigh M. Raczkowski, Oleg Klykov, Pattana Jaroenlak, Daija Bobe, Mykhailo Kopylov +6 more

Structure of bacterial phospholipid transporter MlaFEDB with substrate bound

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.02.129247

N/A

0DataRank · unranked

8 citations

Georgia L. Isom, Mark R. MacRae, Mariyah N. Saiduddin, Gira Bhabha, Damian C. Ekiert +1 more

3-Dimensional Organization and Dynamics of the Microsporidian Polar Tube Invasion Machinery

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.03.024240

N/A

0DataRank · unranked

3 citations

Michael Cammer, А. В. Давыдов, Joseph Sall, Mahrukh Usmani, Feng-Xia Liang +3 more

Targeting Allostery in the Dynein Motor Domain with Small Molecule Inhibitors

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.22.308700

N/A

0DataRank · unranked

3 citations

Keith J. Mickolajczyk, Jonathan B. Steinman, L. Urnavicius, Nan Chen, Yasuhiro Hirata +6 more

The Spike D614G mutation increases SARS-CoV-2 infection of multiple human cell types

eLife(2021)10.7554/elife.65365

N/A

0DataRank · unranked

249 citations

Tristan X. Jordan, Juliana K. Ilmain, Xinyi Guo, Gira Bhabha, Benjamin R. tenOever +2 more

Targeting allostery in the Dynein motor domain with small molecule inhibitors

Cell chemical biology(2021)10.1016/j.chembiol.2021.04.024

N/A

0DataRank · unranked

6 citations

Keith J. Mickolajczyk, Jonathan B. Steinman, L. Urnavicius, Nan Chen, Yasuhiro Hirata +6 more

High-throughput small molecule screen identifies inhibitors of microsporidia invasion and proliferation in C. elegans

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.06.459184

N/A

0DataRank · unranked

2 citations

Noelle V. Antao, Winnie Zhao, Aurore Dubuffet, Hicham El Alaoui, Jessica Knox +5 more

The predicted bZIP transcription factor ZIP-1 promotes resistance to intracellular infection in Caenorhabditis elegans

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.17.448850

N/A

0DataRank · unranked

0 citations

Fengting Wu, Lianne B. Cohen, Kirthi C. Reddy, Ya‐Ting Chang, Spencer S. Gang +3 more

Waffle Method: A general and flexible approach for improving throughput in FIB-milling

Nature Communications(2022)10.1038/s41467-022-29501-3

N/A

0DataRank · unranked

152 citations

Ashleigh M. Raczkowski, Oleg Klykov, Pattana Jaroenlak, Daija Bobe, Mykhailo Kopylov +6 more

The transcription factor ZIP-1 promotes resistance to intracellular infection in Caenorhabditis elegans

Nature Communications(2022)10.1038/s41467-021-27621-w

N/A

0DataRank · unranked

68 citations

Fengting Wu, Lianne B. Cohen, Kirthi C. Reddy, Ya‐Ting Chang, Spencer S. Gang +3 more

De novo design of obligate ABC-type heterotrimeric proteins

Nature Structural & Molecular Biology(2022)10.1038/s41594-022-00879-4

N/A

0DataRank · unranked

30 citations

Andrew Favor, Ya‐Ting Chang, Andrew Norris, Scott E. Boyken, Yang Hsia +8 more

High-throughput small molecule screen identifies inhibitors of microsporidia invasion and proliferation in C. elegans

Nature Communications(2022)10.1038/s41467-022-33400-y

N/A

0DataRank · unranked

28 citations

Noelle V. Antao, Winnie Zhao, Aurore Dubuffet, Hicham El Alaoui, Jessica Knox +5 more

Protein-protein interactions in the Mla lipid transport system probed by computational structure prediction and deep mutational scanning

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.12.09.519820

N/A

0DataRank · unranked

1 citations

Dhenesh Puvanendran, Max A. B. Haase, Nicolas Coudray, Ljuvica Kolich, Cherry Lam +4 more