L. Perera

United States Department of Health and Human Services

Also affiliated with National Institutes of Health, National Institute of Environmental Health Sciences, Structural Integrity Associates (United States)

Physics and Astronomy

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 54 papers. Top paper: “A smooth particle mesh Ewald method”.

A smooth particle mesh Ewald method

The Journal of Chemical Physics(1995)10.1063/1.470117

N/A

1.5DataRank · unranked

22638 citations

Lalith Perera, Max L. Berkowitz, Tom Darden, Hsing Lee, Lee G. Pedersen +2 more

Observation of a new boson at a mass of 125 GeV with the CMS experiment at the LHC

Physics Letters B(2012)10.1016/j.physletb.2012.08.021

N/A

1.4DataRank · unranked

9917 citations

V. Khachatryan, A.M. Sirunyan, A. Tumasyan, W. Adam, E. Aguilo +3409 more

Combined results of searches for the standard model Higgs boson in pp collisions at s=7 TeV

Physics Letters B(2012)10.1016/j.physletb.2012.02.064

N/A

0.980DataRank · unranked

688 citations

V. Khachatryan, A.M. Sirunyan, A. Tumasyan, W. Adam, T. Bergauer +2355 more

Structural insight and characterization of human Twinkle helicase in mitochondrial disease

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2207459119

N/A

0.794DataRank · unranked

23 citations

Jonathan Bouvette, L. Perera, Matthew J. Longley, J.M. Krahn, Jason G. Williams +4 more

Cryo-EM structures of the SARS-CoV-2 endoribonuclease Nsp15 reveal insight into nuclease specificity and dynamics

Nature Communications(2021)10.1038/s41467-020-20608-z

N/A

0.741DataRank · unranked

139 citations

Meredith N. Frazier, Lucas Dillard, Jason G. Williams, Seda Kocaman, J.M. Krahn +11 more

Characterization of SARS2 Nsp15 nuclease activity reveals it's mad about U

Nucleic Acids Research(2021)10.1093/nar/gkab719

N/A

0.661DataRank · unranked

81 citations

Lucas Dillard, J.M. Krahn, L. Perera, Jason G. Williams, Isha M. Wilson +6 more

Cryo-EM Structures of the SARS-CoV-2 Endoribonuclease Nsp15

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.11.244863

N/A

0.588DataRank · unranked

8 citations

Meredith N. Frazier, Lucas Dillard, Jason G. Williams, Seda Kocaman, J.M. Krahn +11 more

Structural basis for pre-tRNA recognition and processing by the human tRNA splicing endonuclease complex

Nature Structural & Molecular Biology(2023)10.1038/s41594-023-00991-z

N/A

0.520DataRank · unranked

31 citations

Kevin John Butay, Zachary D. Stewart, J.M. Krahn, L. Perera, Jason G. Williams +6 more

Molecular interactions of glucocorticoid and mineralocorticoid receptors define novel transcription and biological functions

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.108488

N/A

0.382DataRank · unranked

8 citations

Maria Grazia Petrillo, Christine M. Jewell, Carl D. Bortner, L. Perera, Xiaojiang Xu +7 more

Mechanisms of SSBP1 variants in mitochondrial disease: Molecular dynamics simulations reveal stable tetramers with altered DNA binding surfaces

DNA repair(2021)10.1016/j.dnarep.2021.103212

N/A

0.360DataRank · unranked

10 citations

L. Perera, Min Shi, William C. Copeland, Margaret A. Gustafson

A homozygous missense variant in the YG box domain in an individual with severe spinal muscular atrophy: a case report and variant characterization

Frontiers in Cellular Neuroscience(2023)10.3389/fncel.2023.1259380

N/A

0.241DataRank · unranked

4 citations

L. Perera, Sonia A. Varghese, Yael Shiloh‐Malawsky, Senyene E. Hunter, Tam P. Sneddon +4 more

Modeling Zymogen Protein C

UNC Libraries(2020)10.17615/qcp3-r552

N/A

0DataRank · unranked

0 citations

C. K. Foley, Lee G. Pedersen, Charles T. Esmon, Thomas A. Darden, Timothy Mather +2 more

A finite field method for calculating molecular polarizability tensors for arbitrary multipole rank

UNC Libraries(2020)10.17615/p20b-b363

N/A

0DataRank · unranked

0 citations

Thomas A. Darden, Lee G. Pedersen, Robert A. Duke, L. Perera, Dennis M. Elking

Structure and Dynamics of Zymogen Human Blood Coagulation Factor X

UNC Libraries(2020)10.17615/hrap-6436

N/A

0DataRank · unranked

0 citations

Divi Venkateswarlu, Lee G. Pedersen, L. Perera, Tom Darden

Hiding in Plain Sight: The Bimetallic Magnesium Covalent Bond in Enzyme Active Sites

Figshare(2020)10.17615/f582-bq51

N/A

0DataRank · unranked

0 citations

Lee G. Pedersen, L. Perera, Samuel H. Wilson, William A. Beard

Catalytic mechanism of human DNA polymerase λ with Mg2+ and Mn2+ from ab initio quantum mechanical/molecular mechanical studies

UNC Libraries(2020)10.17615/fabw-yq04

N/A

0DataRank · unranked

0 citations

Miguel García–Díaz, Thomas A. Kunkel, L. Perera, Lee G. Pedersen, Katarzyna Bębenek +1 more

Unusual Fragmentation Pathways in Collagen Glycopeptides

UNC Libraries(2020)10.17615/ndfw-zt97

N/A

0DataRank · unranked

0 citations

Marnisa Sricholpech, L. Perera, Kenneth B. Tomer, Irina Perdivara, Mitsuo Yamauchi +2 more

Atomic forces for geometry-dependent point multipole and Gaussian multipole models

UNC Libraries(2020)10.17615/zqm2-f738

N/A

0DataRank · unranked

0 citations

Lee G. Pedersen, L. Perera, Dennis M. Elking, Robert A. Duke, Thomas A. Darden

Transmembrane Domain Interactions and Residue Proline 378 Are Essential for Proper Structure, Especially Disulfide Bond Formation, in the Human Vitamin K-Dependent γ-Glutamyl Carboxylase †

UNC Libraries(2020)10.17615/ntqs-k459

N/A

0DataRank · unranked

0 citations

Kuang-Ling N. Hsiao, L. Perera, Darrel W. Stafford, Jian‐Ke Tie, David L. Straight +1 more

A new class of cytotoxic agents targets tubulin and disrupts microtubule dynamics

Bioorganic Chemistry(2021)10.1016/j.bioorg.2021.105297

N/A

0DataRank · unranked

19 citations

Radhika Koranne, Samkeliso Dlamini, Abdulateef Alqahtani, Endri Karaj, Maisha S. Rashid +8 more

Structural basis for proficient oxidized ribonucleotide insertion in double strand break repair

Nature Communications(2021)10.1038/s41467-021-24486-x

N/A

0DataRank · unranked

18 citations

Akira Sassa, L. Perera, David D. Shock, William A. Beard, Samuel H. Wilson +1 more

Phosphopeptide interactions of the Nbs1 N-terminal FHA-BRCT1/2 domains

Scientific Reports(2021)10.1038/s41598-021-88400-7

N/A

0DataRank · unranked

11 citations

Thomas W. Kirby, L. Perera, Robert E. London, Kyungmin Kim

NCX-4040, a Unique Nitric Oxide Donor, Induces Reversal of Drug-Resistance in Both ABCB1- and ABCG2-Expressing Multidrug Human Cancer Cells

Cancers(2021)10.3390/cancers13071680

N/A

0DataRank · unranked

19 citations

L. Perera, Ronald E. Cannon, Birandra K. Sinha

The mosquito protein AEG12 displays both cytolytic and antiviral properties via a common lipid transfer mechanism

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2019251118

N/A

0DataRank · unranked

18 citations

Peter M. Thompson, Shih‐Heng Chen, Ramesh Jadi, Brianna Lupo, Eugene F. DeRose +8 more

Probing the mechanisms of two exonuclease domain mutators of DNA polymerase ϵ

Nucleic Acids Research(2021)10.1093/nar/gkab1255

N/A

0DataRank · unranked

13 citations

Natalie Thomas, Maxwell Tracy, Brady L Hearn, L. Perera, Scott R. Kennedy +3 more

A post-transcriptional regulon controlled by TtpA, the single tristetraprolin family member expressed in Dictyostelium discoideum

Nucleic Acids Research(2021)10.1093/nar/gkab983

N/A

0DataRank · unranked

5 citations

Melissa L. Wells, Wi S. Lai, Stephanie N. Hicks, Adam Burkholder, L. Perera +3 more

Characterization of SARS2 Nsp15 Nuclease Activity Reveals it’s Mad About U

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.01.446181

N/A

0DataRank · unranked

5 citations

Lucas Dillard, J.M. Krahn, L. Perera, Jason G. Williams, Isha M. Wilson +6 more

New tricks for modelers from the crystallography toolkit: the particle mesh Ewald algorithm and its use in nucleic acid simulations

UNC Libraries(2021)10.17615/xp7j-h168

N/A

0DataRank · unranked

0 citations

Lee G. Pedersen, Leping Li, L. Perera, Tom Darden

Tunable Cysteine-Targeting Electrophilic Heteroaromatic Warheads Induce Ferroptosis

Journal of Medicinal Chemistry(2022)10.1021/acs.jmedchem.2c00909

N/A

0DataRank · unranked

47 citations

Shaimaa H. Sindi, Nishanth Kuganesan, L. Perera, William R. Taylor, L. M. Viranga Tillekeratne +1 more

A structural exposé of noncanonical molecular reactivity within the protein tyrosine phosphatase WPD loop

Nature Communications(2022)10.1038/s41467-022-29673-y

N/A

0DataRank · unranked

24 citations

L. Perera, Nikolaus Jork, Guangning Zong, Andrew M. Riley, Barry V. L. Potter +3 more

Molecular Modeling Study of the Genotoxicity of the Sudan I and Sudan II Azo Dyes and Their Metabolites

Frontiers in Chemistry(2022)10.3389/fchem.2022.880782

N/A

0DataRank · unranked

17 citations

L. Perera, Melissa A. Pasquinelli, Rachelle J. Bienstock

Pharmacophore optimization of imidazole chalcones to modulate microtubule dynamics

Bioorganic Chemistry(2022)10.1016/j.bioorg.2022.105700

N/A

0DataRank · unranked

11 citations

Samkeliso Dlamini, Radhika Koranne, Shaimaa H. Sindi, L. Perera, William R. Taylor +2 more

Tunable Cysteine-Targeting Electrophilic Hetero-Aromatic Warheads Induce Ferroptosis

ChemRxiv(2022)10.26434/chemrxiv-2022-h9t07

N/A

0DataRank · unranked

0 citations

Shaimaa H. Sindi, Nishanth Kuganesan, L. Perera, William R. Taylor, L. M. Viranga Tillekeratne +1 more

Race/ethnicity-stratified fine-mapping of the MHC locus reveals genetic variants associated with late-onset asthma

Frontiers in Genetics(2023)10.3389/fgene.2023.1173676

N/A

0DataRank · unranked

8 citations

Wonson Choi, Adam Burkholder, L. Perera, Jasmine A. Mack, Frederick W. Miller +13 more

Design of an Ara h 2 hypoallergen from conformational epitopes

Clinical & Experimental Allergy(2024)10.1111/cea.14433

N/A

0DataRank · unranked

22 citations

Tarun Keswani, Nicole A. LaHood, Isabelle R. Lytle, Orlee Marini‐Rapoport, Léna Andrieux +9 more

Structural and ligand binding analysis of the pet allergens Can f 1 and Fel d 7

Frontiers in Allergy(2023)10.3389/falgy.2023.1133412

N/A

0DataRank · unranked

8 citations

Alexander C. Y. Foo, Scott A. Gabel, L. Perera, Eugene F. DeRose, Anna Pomés +3 more

Targeting the Structural Maturation Pathway of HIV-1 Reverse Transcriptase

Biomolecules(2023)10.3390/biom13111603

N/A

0DataRank · unranked

2 citations

Scott A. Gabel, Eugene F. DeRose, L. Perera, J.M. Krahn, Lars C. Pedersen +2 more

A homozygous missense variant in the YG box domain in an individual with severe spinal muscular atrophy: a case report and variant characterization

UNC Libraries(2023)10.17615/7dt9-nx77

N/A

0DataRank · unranked

0 citations

Senyene E. Hunter, Tam P. Sneddon, Yael Shiloh‐Malawsky, Leping Li, L. Perera +4 more

Mouse α-synuclein fibrils are structurally and functionally distinct from human fibrils associated with Lewy body diseases

Science Advances(2024)10.1126/sciadv.adq3539

N/A

0DataRank · unranked

32 citations

Ye Zhou, Meltem Tatlı, Kevin Burbidge, Enquan Xu, Elizabeth Viverette +17 more

A deep intronic splice–altering AIRE variant causes APECED syndrome through antisense oligonucleotide-targetable pseudoexon inclusion

Science Translational Medicine(2024)10.1126/scitranslmed.adk0845

N/A

0DataRank · unranked

12 citations

Amy P. Hsu, Andrew J. Oler, Dhaneshwar Kumar, Daniel Chauss, Jan Piet van Hamburg +44 more

Characterization of spironolactone and metabolites derivatized using Girard's reagent P using mass spectrometry and ion mobility spectrometry

Rapid Communications in Mass Spectrometry(2024)10.1002/rcm.9775

N/A

0DataRank · unranked

4 citations

Kaylie I. Kirkwood‐Donelson, Georgia M. Alexander, L. Perera, Serena M. Dudek, Alan K. Jarmusch +1 more

Ferroptosis Inducers Erastin and RSL3 Enhance Adriamycin and Topotecan Sensitivity in ABCB1/ABCG2-Expressing Tumor Cells

International Journal of Molecular Sciences(2025)10.3390/ijms26020635

N/A

0DataRank · unranked

14 citations

Shalyn M. Brown, Brian B. Silver, Erik J. Tokar, Birandra K. Sinha, L. Perera

LncRNA SLNCR phenocopies the E2F1 DNA binding site to promote melanoma progression

Cell Reports(2025)10.1016/j.celrep.2025.115608

N/A

0DataRank · unranked

3 citations

Eleni Anastasakou, Leinal Sejour, Yufei Wang, León Wert-Lamas, Christopher Rauchet +8 more

Bromine-Based Derivatization of Carboxyl-Containing Metabolites for Liquid Chromatography–Trapped Ion Mobility Spectrometry–Mass Spectrometry

Journal of the American Society for Mass Spectrometry(2025)10.1021/jasms.5c00023

N/A

0DataRank · unranked

2 citations

Prashant Rai, L. Perera, Michael B. Fessler, Alan K. Jarmusch, Kaylie I. Kirkwood‐Donelson

Potential SARS-CoV-2 main protease inhibitors

Drug Discovery Today(2020)10.1016/j.drudis.2020.12.005

N/A

0DataRank · unranked

189 citations

L. Perera, L. M. Viranga Tillekeratne, Riddhidev Banerjee

ESR1 Mutations Associated With Estrogen Insensitivity Syndrome Change Conformation of Ligand-Receptor Complex and Altered Transcriptome Profile

Endocrinology(2020)10.1210/endocr/bqaa050

N/A

0DataRank · unranked

16 citations

Katherine J. Hamilton, L. Perera, Tianyuan Wang, Artiom Gruzdev, Tanner B. Jefferson +8 more

Preferential DNA Polymerase β Reverse Reaction with Imidodiphosphate

ACS Omega(2020)10.1021/acsomega.0c01345

N/A

0DataRank · unranked

1 citations

William A. Beard, Lee G. Pedersen, David D. Shock, Samuel H. Wilson, L. Perera

Molecular Mechanism of Substrate Specificity for Heparan Sulfate 2- O -Sulfotransferase

UNC Libraries(2020)10.17615/d9xr-e616

N/A

0DataRank · unranked

1 citations

Lars C. Pedersen, Wenfang Dou, Juzheng Sheng, Po-Hung Hsieh, Chunhui Liu +4 more

Amino Acid Substitution in the Active Site of DNA Polymerase β Explains the Energy Barrier of the Nucleotidyl Transfer Reaction

UNC Libraries(2020)10.17615/94rm-rk43

N/A

0DataRank · unranked

0 citations

V.K. Batra, William A. Beard, Samuel H. Wilson, Ping Lin, Lars C. Pedersen +3 more

Requirement for transient metal ions revealed through computational analysis for DNA polymerase going in reverse

UNC Libraries(2020)10.17615/jnwd-0w23

N/A

0DataRank · unranked

0 citations

Lee G. Pedersen, David D. Shock, Bret Freudenthal, Samuel H. Wilson, L. Perera +1 more

HPAM: Hirshfeld partitioned atomic multipoles

UNC Libraries(2020)10.17615/dtgp-g516

N/A

0DataRank · unranked

0 citations

Dennis M. Elking, Lee G. Pedersen, L. Perera

Explicit Water Near the Catalytic I Helix Thr in the Predicted Solution Structure of CYP2A4

UNC Libraries(2020)10.17615/x4x7-bt80

N/A

0DataRank · unranked

0 citations

Tom Darden, L. Perera, Lee G. Pedersen, Anna Gorokhov, Eric F. Johnson +2 more

Heparan Sulfate Biosynthesis: A Theoretical Study of the Initial Sulfation Step by N-Deacetylase/N-Sulfotransferase

UNC Libraries(2020)10.17615/rg60-9t15

N/A

0DataRank · unranked

0 citations

L. Perera, Lars C. Pedersen, Lee G. Pedersen, Anna Gorokhov, Masahiko Negishi +1 more

Computational study of the putative active form of protein Z (PZa): Sequence design and structural modeling

UNC Libraries(2020)10.17615/hnfq-5j58

N/A

0DataRank · unranked

0 citations

Lee G. Pedersen, Chang Jun Lee, Robert E. Duke, L. Perera, V. Chandrasekaran