Luca Pinello

Also affiliated with Harvard University, Massachusetts General Hospital, Center for Cancer Research

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 30 papers. Top paper: “Aging-Associated Alterations in Mammary Epithelia and Stroma Revealed by Single-Cell RNA Sequencing”.

Aging-Associated Alterations in Mammary Epithelia and Stroma Revealed by Single-Cell RNA Sequencing

Cell Reports(2020)10.1016/j.celrep.2020.108566

N/A

4.1DataRank · unranked

208 citations

Hana Shapiro, Christina Tsiobikas, Laura M. Selfors, Huidong Chen, Jennifer M. Rosenbluth +10 more

Hedgehog interacting protein–expressing lung fibroblasts suppress lymphocytic inflammation in mice

JCI Insight(2021)10.1172/jci.insight.144575

N/A

0.764DataRank · unranked

26 citations

ChangHee Lee, Tao Liu, Siqi Liu, Edy Y. Kim, Shuang Xu +7 more

Dictys: dynamic gene regulatory network dissects developmental continuum with single-cell multiomics

Nature Methods(2023)10.1038/s41592-023-01971-3

N/A

0.705DataRank · unranked

109 citations

Nikolaos Trasanidis, Ting Wu, Guanlan Dong, M. Hu, Daniel E. Bauer +2 more

Single-cell analysis and functional characterization uncover the stem cell hierarchies and developmental origins of rhabdomyosarcoma

Nature Cancer(2022)10.1038/s43018-022-00414-w

N/A

0.631DataRank · unranked

66 citations

Qian Qin, Chuan Yan, Madeline N. Hayes, Sara P. Garcia, Haibin Xi +16 more

Defining and benchmarking open problems in single-cell analysis

Research Square(2024)10.21203/rs.3.rs-4181617/v1

N/A

0.603DataRank · unranked

17 citations

Scott Gigante, Daniel B. Burkhardt, Robrecht Cannoodt, Daniel Strobl, Nikolay S. Markov +45 more

PrimeDesign software for rapid and simplified design of prime editing guide RNAs

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.04.077750

N/A

0.529DataRank · unranked

33 citations

Andrew V. Anzalone, Julian Grünewald, Kin Chung Lam, Max W. Shen, David R. Liu +3 more

Selective Enhancer Gain-of-Function Deregulates MYC Expression in Multiple Myeloma

Cancer Research(2024)10.1158/0008-5472.can-24-1440

N/A

0.386DataRank · unranked

7 citations

Kendell Clement, Jean-Baptiste Alberge, Romanos Sklavenitis‐Pistofidis, Rohan Kodgule, Charles P. Fulco +9 more

Designing synthetic regulatory elements using the generative AI framework DNA-Diffusion

Nature Genetics(2025)10.1038/s41588-025-02441-6

N/A

0.373DataRank · unranked

11 citations

Simon Senan, Judith F. Kribelbauer, Z. Patel, Lithin Karmel Louis, Aniketh Janardhan Reddy +22 more

Integrative dissection of gene regulatory elements at base resolution

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.05.511030

N/A

0.345DataRank · unranked

9 citations

Nauman Javed, Molly M. Moore, Jingyi Wu, Michael Vinyard, Luca Pinello +3 more

A molecular glue approach to control the half-life of CRISPR-based technologies

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.12.531757

N/A

0.266DataRank · unranked

4 citations

Max Jan, Kevin T. Zhao, Donghyun Lim, Jessie R. Davis, Marie McConkey +14 more

Human genetic diversity alters therapeutic gene editing off-target outcomes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.20.445054

N/A

0DataRank · unranked

5 citations

Jing Zeng, Linda Yingqi Lin, Manuel Tognon, My Anh Nguyen, Jiecong Lin +11 more

Human genetic diversity alters off-target outcomes of therapeutic gene editing

Nature Genetics(2022)10.1038/s41588-022-01257-y

N/A

0DataRank · unranked

115 citations

Jing Zeng, Linda Yingqi Lin, Manuel Tognon, My Anh Nguyen, Jiecong Lin +11 more

Precise DNA cleavage using CRISPR-SpRYgests

Nature Biotechnology(2022)10.1038/s41587-022-01492-y

N/A

0DataRank · unranked

53 citations

Jimmy A. Guo, Rachel A. Silverstein, Roman M. Doll, Megumu Mabuchi, Hannah E. Stutzman +7 more

Dictys: dynamic gene regulatory network dissects developmental continuum with single-cell multi-omics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.14.508036

N/A

0DataRank · unranked

14 citations

Nikolaos Trasanidis, Ting Wu, Guanlan Dong, M. Hu, Daniel E. Bauer +2 more

SIMBA: SIngle-cell eMBedding Along with features

Research Square(2022)10.21203/rs.3.rs-1180954/v1

N/A

0DataRank · unranked

10 citations

Jayoung Ryu, Michael Vinyard, Adam Lerer, Luca Pinello, Huidong Chen

SIMBA: SIngle-cell eMBedding Along with features

Research Square(2022)10.21203/rs.3.rs-1180954/v2

N/A

0DataRank · unranked

0 citations

Huidong Chen, Jayoung Ryu, Michael Vinyard, Adam Lerer, Luca Pinello

Pyro-Velocity: Probabilistic RNA Velocity inference from single-cell data

Research Square(2022)10.21203/rs.3.rs-2059147/v1

N/A

0DataRank · unranked

0 citations

Eli Bingham, Qian Qin, David M. Langenau, Gioele La Manno, Luca Pinello

SIMBA: single-cell embedding along with features

Nature Methods(2023)10.1038/s41592-023-01899-8

N/A

0DataRank · unranked

74 citations

Jayoung Ryu, Michael Vinyard, Adam Lerer, Luca Pinello, Huidong Chen

CRISPR PERSIST-On enables heritable and fine-tunable human gene activation

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.26.590475

N/A

0DataRank · unranked

3 citations

Jonathan Y. Hsu, Justine Shih, Hayley T. Schultz, Ivy Nguyen, Kin Chung Lam +3 more

MOSAIC enables in situ saturation mutagenesis of genes and CRISPR prime editing guide RNA optimization in human cells

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.25.591078

N/A

0DataRank · unranked

1 citations

Kin Chung Lam, Justine Shih, Luca Pinello, J. Keith Joung, Jonathan Y. Hsu

The PIK3CA/AKT pathway drives therapy resistance in rhabdomyosarcoma

Nature Communications(2025)10.1038/s41467-025-66632-9

N/A

0DataRank · unranked

0 citations

Yueyang Wang, Luís A. Corchete, Sabateeshan Mathavarajah, Qian Qin, Yun Wei +11 more

Epigenetic Alterations in Keratinocyte Carcinoma

Journal of Investigative Dermatology(2020)10.1016/j.jid.2020.10.018

N/A

0DataRank · unranked

12 citations

Charles B. Epstein, Samridhi Banskota, Robbyn Issner, Yuhree Kim, B Bernstein +3 more

Technologies and Computational Analysis Strategies for CRISPR Applications

Molecular Cell(2020)10.1016/j.molcel.2020.06.012

N/A

0DataRank · unranked

46 citations

Jonathan Y. Hsu, Matthew C. Canver, J. Keith Joung, Luca Pinello, Kendell Clement

ZNF410 represses fetal globin by devoted control of CHD4/NuRD

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.31.272856

N/A

0DataRank · unranked

0 citations

Qiuming Yao, Mitchel A. Cole, Connor McGuckin, Chunyan Ren, Jing Zeng +6 more

PrimeDesign software for rapid and simplified design of prime editing guide RNAs

Research Square(2020)10.21203/rs.3.rs-111349/v1

N/A

0DataRank · unranked

0 citations

Julian Grünewald, Regan N. Szalay, Justine Shih, Andrew V. Anzalone, Kin Chung Lam +6 more

Three subtypes of lung cancer fibroblasts define distinct therapeutic paradigms

Cancer Cell(2021)10.1016/j.ccell.2021.09.003

N/A

0DataRank · unranked

263 citations

Zofia Piotrowska, Patricia J. Hare, Huidong Chen, Hillary E. Mulvey, Aislinn Mayfield +23 more

PrimeDesign software for rapid and simplified design of prime editing guide RNAs

Nature Communications(2021)10.1038/s41467-021-21337-7

N/A

0DataRank · unranked

195 citations

Julian Grünewald, Regan N. Szalay, Justine Shih, Andrew V. Anzalone, Kin Chung Lam +6 more

GRAFIMO: Variant and haplotype aware motif scanning on pangenome graphs

PLoS Computational Biology(2021)10.1371/journal.pcbi.1009444

N/A

0DataRank · unranked

13 citations

Vincenzo Bonnici, Erik Garrison, Rosalba Giugno, Luca Pinello, Manuel Tognon

Motif-Raptor: a cell type-specific and transcription factor centric approach for post-GWAS prioritization of causal regulators

Bioinformatics(2021)10.1093/bioinformatics/btab072

N/A

0DataRank · unranked

11 citations

Paolo Ferragina, Yakir Reshef, Guillaume Lettre, Daniel E. Bauer, Luca Pinello +1 more

SIMBA: SIngle-cell eMBedding Along with features

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.17.464750

N/A

0DataRank · unranked

10 citations

Jayoung Ryu, Michael Vinyard, Adam Lerer, Luca Pinello, Huidong Chen