Samouil L. Farhi

Biochemistry, Genetics and Molecular BiologyNeuroscience

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 20 papers. Top paper: “COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets”.

COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets

Nature(2021)10.1038/s41586-021-03570-8

N/A

10.7DataRank · unranked

879 citations

Carly G.K. Ziegler, Graham Heimberg, Rachelly Normand, Yiming Yang, Åsa Segerstolpe +95 more

Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.07.570603

N/A

2.7DataRank · unranked

80 citations

Ruixu Huang, Jack Nelson, Ce Gao, Miles Tran, Anna H. Yeaton +8 more

Single-nucleus and spatial transcriptomics of archival pancreatic cancer reveals multi-compartment reprogramming after neoadjuvant treatment

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.25.267336

N/A

1.6DataRank · unranked

35 citations

Karthik A. Jagadeesh, Jimmy A. Guo, Hannah I. Hoffman, Payman Yadollahpour, Rahul Mohan +46 more

The 22q11.2 region regulates presynaptic gene-products linked to schizophrenia

Nature Communications(2022)10.1038/s41467-022-31436-8

N/A

1.4DataRank · unranked

61 citations

Olli Pietiläinen, Mykyta Artomov, Matthew Tegtmeyer, Vera Valakh, Leevi Lehtonen +40 more

Simultaneous CRISPR screening and spatial transcriptomics reveals intracellular, intercellular, and functional transcriptional circuits

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.30.569494

N/A

0.988DataRank · unranked

21 citations

Serwah Danquah, Vera Valakh, Brooke Simonton, Jon Bezney, Ralda Nehme +3 more

MCMICRO: a scalable, modular image-processing pipeline for multiplexed tissue imaging

Nature Methods(2021)10.1038/s41592-021-01308-y

N/A

0.827DataRank · unranked

247 citations

Artem Sokolov, Clarence Yapp, Yu‐An Chen, Jeremy L. Muhlich, Joshua M. Hess +22 more

Simultaneous CRISPR screening and spatial transcriptomics reveal intracellular, intercellular, and functional transcriptional circuits

Cell(2025)10.1016/j.cell.2025.02.012

N/A

0.686DataRank · unranked

96 citations

Aiping Jiang, Serwah Danquah, Vera Valakh, Brooke Simonton, Jon Bezney +6 more

MCMICRO: A scalable, modular image-processing pipeline for multiplexed tissue imaging

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.15.435473

N/A

0.568DataRank · unranked

43 citations

Artem Sokolov, Clarence Yapp, Jeremy L. Muhlich, Joshua M. Hess, Jia‐Ren Lin +16 more

Systematic benchmarking of imaging spatial transcriptomics platforms in FFPE tissues

Nature Communications(2025)10.1038/s41467-025-64990-y

N/A

0.500DataRank · unranked

27 citations

Ruixu Huang, Jack Nelson, Ce Gao, Miles Tran, Anna H. Yeaton +9 more

An integrative systems-biology approach defines mechanisms of Alzheimer’s disease neurodegeneration

Nature Communications(2025)10.1038/s41467-025-59654-w

N/A

0.464DataRank · unranked

21 citations

Camila A. Zanella, Byunguk Kang, Jiajie Peng, David Gritsch, Zhixiang Liao +13 more

Pyramidal neurons proportionately alter the identity and survival of specific cortical interneuron subtypes

Research Square(2024)10.21203/rs.3.rs-4774421/v1

N/A

0.292DataRank · unranked

6 citations

Sherry Jingjing Wu, Min Dai, Shang-Po Yang, Cai McCann, Yanjie Qiu +8 more

Coordinated Immune Cell Networks in the Bone Marrow Microenvironment Define the Graft versus Leukemia Response with Adoptive Cellular Therapy

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.09.579677

N/A

0.292DataRank · unranked

6 citations

Cameron Y. Park, Shouvik Mani, Mehdi Borji, Livius Penter, Yinuo Jin +20 more

An integrative systems-biology approach defines mechanisms of Alzheimer’s disease neurodegeneration

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.17.585262

N/A

0.269DataRank · unranked

5 citations

Camila A. Zanella, Byunguk Kang, Jiajie Peng, David Gritsch, Zhixiang Liao +13 more

Single-cell and spatiotemporal profile of ovulation in the mouse ovary

PLoS Biology(2025)10.1371/journal.pbio.3003193

N/A

0DataRank · unranked

7 citations

Caroline E. Kratka, Jeffrey Pea, Cai McCann, Jack Nelson, John Bryan +10 more

Astrocytic cell adhesion genes linked to schizophrenia correlate with synaptic programs in neurons

Cell Reports(2023)10.1016/j.celrep.2022.111988

N/A

0DataRank · unranked

36 citations

Aditi Trehan, Daniel Meyer, Jana M. Mitchell, Matthew Tegtmeyer, Vera Valakh +8 more

Robust induction of functional astrocytes using NGN2 expression in human pluripotent stem cells

iScience(2023)10.1016/j.isci.2023.106995

N/A

0DataRank · unranked

24 citations

Matthew Tegtmeyer, Loïc Binan, Vera Valakh, Anna Nathanson, Darina Trendafilova +11 more

Single-nucleus RNA-seq of frozen archival primary pancreatic ductal adenocarcinoma uncovers multi-compartment intratumoral heterogeneity associated with neoadjuvant treatment.

Journal of Clinical Oncology(2020)10.1200/jco.2020.38.15_suppl.4633

N/A

0DataRank · unranked

0 citations

Hannah I. Hoffman, Orr Ashenberg, Eugene Drokhlyansky, Nicholas Van Wittenberghe, Samouil Farhi +18 more

Robust self-supervised denoising of voltage imaging data using CellMincer

npj Imaging(2024)10.1038/s44303-024-00055-x

N/A

0DataRank · unranked

4 citations

Tianle Ma, Theresa Chen, Trinh Nguyen, Ethan Crouse, Stephen J. Fleming +7 more

Robust self-supervised denoising of voltage imaging data using CellMincer

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.12.589298

N/A

0DataRank · unranked

6 citations

Tianle Ma, Theresa Chen, Trinh Nguyen, Ethan Crouse, Stephen J. Fleming +7 more

Astrocytic cell adhesion genes linked to schizophrenia correlate with synaptic programs in neurons

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.11.459765

N/A

0DataRank · unranked

3 citations

Aditi Trehan, Daniel Meyer, Jana M. Mitchell, Matthew Tegtmeyer, Vera Valakh +8 more