Bo Huang

Also affiliated with University of California, San Francisco, Quantitative BioSciences, Chan Zuckerberg Biohub San Francisco, University of San Francisco

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 42 papers. Top paper: “Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project”.

Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project

Molecular Cell(2023)10.1016/j.molcel.2023.06.018

N/A

1.7DataRank · unranked

97 citations

Frank Alber, Sarah Aufmkolk, Brian J. Beliveau, Benoit G. Bruneau, Andrew S. Belmont +30 more

Focal adhesion kinase-YAP signaling axis drives drug-tolerant persister cells and residual disease in lung cancer

Nature Communications(2024)10.1038/s41467-024-47423-0

N/A

1.7DataRank · unranked

93 citations

Yu‐Ting Chou, Lauren Čech, Celia Fernández-Méndez, Johnny Yu, Victor Olivas +30 more

OpenCell: Endogenous tagging for the cartography of human cellular organization

Science(2022)10.1126/science.abi6983

N/A

0.965DataRank · unranked

622 citations

Keith C. Cheveralls, Andreas-David Brunner, Kibeom Kim, André C. Michaelis, Preethi Raghavan +22 more

Spatial decoding of endosomal cAMP signals by a metastable cytoplasmic PKA network

Nature Chemical Biology(2021)10.1038/s41589-021-00747-0

N/A

0.587DataRank · unranked

49 citations

Veronica Pessino, Bo Huang, Mark von Zastrow, Grace E. Peng

Improved yellow-green split fluorescent proteins for protein labeling and signal amplification

PLoS ONE(2020)10.1371/journal.pone.0242592

N/A

0.510DataRank · unranked

29 citations

Siyu Feng, David T. Brown, Bo Huang, Shuqin Zhou

Versatile Labeling and Detection of Endogenous Proteins Using Tag-Assisted Split Enzyme Complementation

ACS Chemical Biology(2021)10.1021/acschembio.0c00925

N/A

0.489DataRank · unranked

25 citations

David T. Brown, Rachel M. Rudlaff, Julia K. Doh, Struan Bourke, Yina Wang +4 more

Oncogenic EML4-ALK assemblies suppress growth factor perception and modulate drug tolerance

Nature Communications(2024)10.1038/s41467-024-53451-7

N/A

0.457DataRank · unranked

20 citations

L. E. Roth, Thomas R. Mumford, Juan Guan, Anh‐Tuan Le, Robert C. Doebele +6 more

A focal adhesion kinase-YAP signaling axis drives drug tolerant persister cells and residual disease in lung cancer

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.23.465573

N/A

0.442DataRank · unranked

18 citations

Celia Fernández-Méndez, Lauren Čech, Johnny Yu, Ismail M. Meraz, Victor Olivas +28 more

Mantis: High-throughput 4D imaging and analysis of the molecular and physical architecture of cells

PNAS Nexus(2024)10.1093/pnasnexus/pgae323

N/A

0.406DataRank · unranked

14 citations

Eduardo Hirata-Miyasaki, Talon Chandler, Rasmi Cheloor-Kovilakam, Ziwen Liu, Soorya Pradeep +8 more

Understanding Regulatory Mechanisms of Brain Function and Disease through 3D Genome Organization

Genes(2022)10.3390/genes13040586

N/A

0.406DataRank · unranked

14 citations

Wujuan Zhong, Jiawen Chen, Bo Huang, Ming Hu, Yun Li +1 more

Image denoising for fluorescence microscopy by self-supervised transfer learning

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.01.429188

N/A

0.398DataRank · unranked

3 citations

Henry Pinkard, Emaad Khwaja, Shuqin Zhou, Laura Waller, Bo Huang +1 more

High activity and high functional connectivity are mutually exclusive in resting state zebrafish and human brains

BMC Biology(2022)10.1186/s12915-022-01286-3

N/A

0.349DataRank · unranked

6 citations

Dan Xie, Fei Jiang, Adil Bagirov, Bo Huang, Ashish Raj +3 more

Understanding how genetically encoded tags and crowding agents affect phase separation by heterochromatin protein HP1α

Cell Reports Methods(2025)10.1016/j.crmeth.2025.101029

N/A

0.330DataRank · unranked

8 citations

Kibeom Hong, Bo Huang, Geeta J. Narlikar, Ziling Zhou

Genome-scale CRISPR screens identify PTGES3 as a direct modulator of androgen receptor function in advanced prostate cancer

Nature Genetics(2025)10.1038/s41588-025-02388-8

N/A

0.312DataRank · unranked

7 citations

James E. Melnyk, Becky Xu Hua Fu, Raunak Shrestha, Meng Zhang, Martin Sjöström +34 more

YAP charge patterning mediates signal integration through transcriptional co-condensates

Nature Communications(2025)10.1038/s41467-025-62157-3

N/A

0.292DataRank · unranked

6 citations

Klaus Yserentant, Rasmi Cheloor-Kovilakam, Kiersten M. Ruff, Chan-I Chung, Xiaokun Shu +3 more

A ciliopathy complex builds distal appendages to initiate ciliogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.01.433418

N/A

0.241DataRank · unranked

4 citations

Addison B. Rains, Vicente Herranz‐Pérez, Quanlong Lü, Xiaoyu Shi, Danielle L. Swaney +8 more

High activity and high functional connectivity are mutually exclusive in resting state zebrafish and human brains

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.02.446741

N/A

0.104DataRank · unranked

1 citations

Dan Xie, Fei Jiang, Adil Abigrove, Bo Huang, Ashish Raj +3 more

FluoSTEPs: Fluorescent biosensors for monitoring compartmentalized signaling within endogenous microdomains

Science Advances(2021)10.1126/sciadv.abe4091

N/A

0DataRank · unranked

39 citations

Jason Z. Zhang, Yonghoon Kwon, Veronica Pessino, Siyu Feng, Bo Huang +3 more

A ciliopathy complex builds distal appendages to initiate ciliogenesis

The Journal of Cell Biology(2021)10.1083/jcb.202011133

N/A

0DataRank · unranked

54 citations

Addison B. Rains, Vicente Herranz‐Pérez, Quanlong Lü, Xiaoyu Shi, Danielle L. Swaney +8 more

Structural insights into the human PA28–20S proteasome enabled by efficient tagging and purification of endogenous proteins

Proceedings of the National Academy of Sciences(2022)10.1073/pnas.2207200119

N/A

0DataRank · unranked

40 citations

Suraj Makhija, Chenyu Zhou, Hanxiao Zhang, Yongqiang Wang, Monita Muralidharan +3 more

Image denoising for fluorescence microscopy by supervised to self-supervised transfer learning

Optics Express(2021)10.1364/oe.434191

N/A

0DataRank · unranked

31 citations

Henry Pinkard, Emaad Khwaja, Shuqin Zhou, Laura Waller, Bo Huang +1 more

A zebrafish screen reveals Renin-angiotensin system inhibitors as neuroprotective via mitochondrial restoration in dopamine neurons

eLife(2021)10.7554/elife.69795

N/A

0DataRank · unranked

49 citations

Han Mo, Harrison Liu, Zhihao Wu, Steven Chen, Jiashun Zheng +16 more

Oncogenic protein condensates suppress growth factor perception and modulate drug tolerance

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.02.478845

N/A

0DataRank · unranked

5 citations

L. E. Roth, Thomas R. Mumford, Juan Guan, Bo Huang, Asmin Tulpule +3 more

Oncogenic protein condensates suppress growth factor perception and modulate drug tolerance

Research Square(2022)10.21203/rs.3.rs-1390251/v1

N/A

0DataRank · unranked

0 citations

David Gonzalez-Martinez, L. E. Roth, Thomas R. Mumford, Juan Guan, Bo Huang +3 more

Label-retention expansion microscopy

The Journal of Cell Biology(2021)10.1083/jcb.202105067

N/A

0DataRank · unranked

87 citations

Qi Li, Zhipeng Dai, Arthur A. Tran, Siyu Feng, Alejandro Ramirez +11 more

Efficient tagging of endogenous proteins in human cell lines for structural studies by single-particle cryo-EM

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2302471120

N/A

0DataRank · unranked

10 citations

Hao Wu, Klaus Yserentant, Bo Huang, Yifan Cheng, Woo-Young Choi

CELL-E 2: Translating Proteins to Pictures and Back with a Bidirectional Text-to-Image Transformer

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.05.561066

N/A

0DataRank · unranked

3 citations

Yun S. Song, Aaron Agarunov, Bo Huang, Emaad Khwaja

HybriSeq: Probe-based Device-free Single-cell RNA Profiling

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.27.559406

N/A

0DataRank · unranked

0 citations

David T. Brown, Shuqin Zhou, Brittany Moser, Qin Zhu, Zev J Gartner +2 more

Kinase-mediated RAS signaling via membraneless cytoplasmic protein granules

Cell(2021)10.1016/j.cell.2021.03.031

N/A

0DataRank · unranked

190 citations

Juan Guan, Dana S. Neel, Hannah R. Allegakoen, Yone Phar Lin, David T. Brown +15 more

HP1 proteins compact DNA into mechanically and positionally stable phase separated domains

eLife(2021)10.7554/elife.64563

N/A

0DataRank · unranked

242 citations

David A. Brown, Lucy D. Brennan, Roman Renger, Harrison Khoo, Christopher R. Carlson +5 more

Versatile labeling and detection of endogenous proteins using tag-assisted split enzyme complementation

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.01.407072

N/A

0DataRank · unranked

0 citations

David T. Brown, Struan Bourke, Yina Wang, Shuqin Zhou, Rachel M. Rudlaff +3 more

Stepwise de novo establishment of inactive X chromosome architecture in early development

Nature Genetics(2024)10.1038/s41588-024-01897-2

N/A

0DataRank · unranked

9 citations

Liangjun Hu, Zhuoning Zou, Meishuo Liu, Zihan Li, Xukun Lu +14 more

High-resolution Positronium Lifetime Imaging on the PennPET Explorer

(2024)10.1109/nss/mic/rtsd57108.2024.10656096

N/A

0DataRank · unranked

3 citations

Bing Tian Dai, E. J. Li, Joel S. Karp, Jinyi Qi, Bo Huang

YAP charge patterning mediates signal integration through transcriptional co-condensates

Research Square(2024)10.21203/rs.3.rs-5228191/v1

N/A

0DataRank · unranked

0 citations

Kirstin Meyer, Klaus Yserentant, Rasmi Cheloor-Kovilakam, Kiersten M. Ruff, Chan-I Chung +3 more

Improved yellow-green split fluorescent proteins for protein labeling and signal amplification

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.27.315697

N/A

0DataRank · unranked

1 citations

Siyu Feng, David T. Brown, Bo Huang, Shuqin Zhou

Polarized endosome dynamics engage cytosolic Par-3 and dynein during asymmetric division

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.15.098012

N/A

0DataRank · unranked

4 citations

Kai Tong, Xingye Chen, Bin Yang, Qi Li, Zhipeng Dai +5 more

HP1 proteins compact DNA into mechanically and positionally stable phase separated domains

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.30.362772

N/A

0DataRank · unranked

15 citations

David A. Brown, Lucy D. Brennan, Roman Renger, Harrison Khoo, Christopher R. Carlson +5 more

HybriSeq: probe-based device-free single-cell RNA profiling

Communications Biology(2025)10.1038/s42003-025-08702-8

N/A

0DataRank · unranked

3 citations

David T. Brown, Shuqin Zhou, Brittany Moser, Qin Zhu, Zev J. Gartner +2 more

De novo designed bright, hyperstable rhodamine binders for fluorescence microscopy

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.24.661379

N/A

0DataRank · unranked

4 citations

Klaus Yserentant, Kibeom Hong, Y. P. Kuang, Arghya Bhowmick, Arthur Charles‐Orszag +10 more

Accessible and accurate cytometry analysis using fluorescence microscopes

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.22.634380

N/A

0DataRank · unranked

0 citations

Y. P. Kuang, Samma Rehem, Klaus Yserentant, Bo Huang, Daniel Foyt

A molecular mechanism for probabilistic bet hedging and its role in viral latency

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.1914430117

N/A

0DataRank · unranked

18 citations

Jon Klein, Noam Vardi, Cynthia Bolovan‐Fritts, Marie Wolf, Kelvin Du +7 more

Accessible and accurate cytometry analysis of adherent cells using fluorescence microscopes

Scientific Reports(2025)10.1038/s41598-025-01957-5

N/A

0DataRank · unranked

0 citations

Y. P. Kuang, Samma Rehem, Klaus Yserentant, Bo Huang, Daniel Foyt