🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Armen Abnousi

Cleveland Clinic

ORCID: 0000-0003-1822-0928
Biochemistry, Genetics and Molecular BiologyAgricultural and Biological Sciences

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 4%percentile
0.586Author DataRank

Indexed papers

4in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Integrative analysis of the 3D genome and epigenome in mouse embryonic tissues

Nature Structural & Molecular Biology(2024)10.1038/s41594-024-01431-2
Top 40%
0.482DataRank
Top 40%7 citations

Nathan R. Zemke, Ziyin Chen, Ivan Jurić, Rong Hu, Ramya Raviram +16 more

Papers

Driven by 20 papers — median percentile 41. Top paper: “Cell-type-specific 3D epigenomes in the developing human cortex”.

Cell-type-specific 3D epigenomes in the developing human cortex

Nature(2020)10.1038/s41586-020-2825-4
N/A
0.768DataRank · unranked
166 citations

Mark-Phillip Pebworth, Xiaoyu Yang, Armen Abnousi, Changxu Fan, Jia Wen +18 more

SnapHiC: a computational pipeline to identify chromatin loops from single-cell Hi-C data

Nature Methods(2021)10.1038/s41592-021-01231-2
N/A
0.688DataRank · unranked
97 citations

Armen Abnousi, Yanxiao Zhang, Guoqiang Li, Lindsay Lee, Ziyin Chen +9 more

Transcriptional network orchestrating regional patterning of cortical progenitors

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2024795118
N/A
0.606DataRank · unranked
56 citations

Kartik Pattabiraman, Rinaldo Catta-Preta, Olga Golonzhka, Susan Lindtner, Ke Tang +15 more

3D Epigenomic Characterization Reveals Insights Into Gene Regulation and Lineage Specification During Corticogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.24.963652
N/A
0.530DataRank · unranked
7 citations

Mark-Phillip Pebworth, Xiaoyu Yang, Armen Abnousi, Changxu Fan, Jia Wen +17 more

Parallel characterization of cis-regulatory elements for multiple genes using CRISPRpath

Science Advances(2021)10.1126/sciadv.abi4360
N/A
0.510DataRank · unranked
29 citations

Mengchi Wang, Bingkun Li, Kirsty Jamieson, Lina Zheng, Ian Jones +16 more

Integrative analysis of the 3D genome and epigenome in mouse embryonic tissues

Nature Structural & Molecular Biology(2024)10.1038/s41594-024-01431-2
Top 40%
0.482DataRank
Top 40%7 citations

Nathan R. Zemke, Ziyin Chen, Ivan Jurić, Rong Hu, Ramya Raviram +16 more

A systematic evaluation of Hi-C data enhancement methods for enhancing PLAC-seq and HiChIP data

Briefings in Bioinformatics(2022)10.1093/bib/bbac145
N/A
0.269DataRank · unranked
5 citations

Yuchen Yang, Gang Li, Min-Zhi Jiang, Jia Wen, Armen Abnousi +4 more

Transcriptional Network Orchestrating Regional Patterning of Cortical Progenitors

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.03.366914
N/A
0.241DataRank · unranked
4 citations

Kartik Pattabiraman, Rinaldo Catta-Preta, Olga Golonzhka, Susan Lindtner, Ke Tang +15 more

A Fast Alignment-Free Approach for De Novo Detection of Protein Conserved Regions

PLOS ONE(2016)10.1371/journal.pone.0161338
N/A
0.208DataRank · unranked
3 citations

Shira L. Broschat, Ananth Kalyanaraman, Armen Abnousi

MUNIn: A statistical framework for identifying long-range chromatin interactions from multiple samples

Human Genetics and Genomics Advances(2021)10.1016/j.xhgg.2021.100036
N/A
0.178DataRank · unranked
2 citations

Yuchen Yang, Armen Abnousi, Qian Zhang, Naoki Kubo, Joshua S. Martin Beem +3 more

HPTAD: A computational method to identify topologically associating domains from HiChIP and PLAC-seq datasets

Computational and Structural Biotechnology Journal(2023)10.1016/j.csbj.2023.01.003
N/A
0.165DataRank · unranked
2 citations

Lindsay Lee, Armen Abnousi, Jiawen Chen, Jia Wen, Ming Hu +2 more

Parallel Characterization of cis -Regulatory Elements for Multiple Genes Using CRISPRpath

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.19.431931
N/A
0.104DataRank · unranked
1 citations

Mengchi Wang, Bingkun Li, Kirsty Jamieson, Lina Zheng, Ian Jones +16 more

Integrative analysis of the 3D genome and epigenome in mouse embryonic tissues

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.25.489471
Top 78%
0.104DataRank
Top 78%1 citations

Nathan R. Zemke, Ziyin Chen, Ivan Jurić, Rong Hu, Ramya Raviram +15 more

Combinatorial transcription factor binding encodes cis-regulatory wiring of forebrain GABAergic neurogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.28.546894
N/A
0DataRank · unranked
3 citations

Susan Lindtner, Athéna R. Ypsilanti, James D. Price, Armen Abnousi, Linda Su-Feher +12 more

HiC-ACT: improved detection of chromatin interactions from Hi-C data via aggregated Cauchy test

The American Journal of Human Genetics(2021)10.1016/j.ajhg.2021.01.009
N/A
0DataRank · unranked
26 citations

Armen Abnousi, Ming Hu, Yuchen Yang, Yun Li, Taylor M. Lagler

Comparative characterization of human accelerated regions in neurons

Nature(2025)10.1038/s41586-025-08622-x
N/A
0DataRank · unranked
22 citations

Han Yang, Charles Q. Cai, Cooper Beaman, Xiaoyu Yang, Hongjiang Liu +14 more

HPTAD: A computational method to identify topologically associating domains from HiChIP and PLAC-seq datasets

UNC Libraries(2025)10.17615/3wf1-gk25
N/A
0DataRank · unranked
0 citations

Jia Wen, Yun Li, Armen Abnousi, Ming Hu, Jonathan D. Rosen +2 more

SnapHiC2: A computationally efficient loop caller for single cell Hi-C data

Computational and Structural Biotechnology Journal(2022)10.1016/j.csbj.2022.05.046
N/A
0DataRank · unranked
22 citations

Lindsay Lee, Armen Abnousi, Miao Yu, Weifang Liu, Le Huang +3 more

Global analysis of histone modifications and long-range chromatin interactions revealed the differential cistrome changes and novel transcriptional players in human dilated cardiomyopathy

Journal of Molecular and Cellular Cardiology(2020)10.1016/j.yjmcc.2020.06.001
N/A
0DataRank · unranked
21 citations

Armen Abnousi, Peter Bazeley, Ying Ni, Michael P. Morley, Christine S. Moravec +3 more

HPRep: Quantifying Reproducibility in HiChIP and PLAC-Seq Datasets

Current Issues in Molecular Biology(2021)10.3390/cimb43020082
N/A
0DataRank · unranked
9 citations

Yuchen Yang, Armen Abnousi, Jiawen Chen, Michael Song, Ian Jones +4 more