Yulin Dai

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

1.8Author DataRank

Indexed papers

5in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 5 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

CSEA-DB: an omnibus for human complex trait and cell type associations

Nucleic Acids Research(2020)10.1093/nar/gkaa1064

Top 20%

1.0DataRank

Top 20%31 citations

Ruifeng Hu, Astrid M. Manuel, Andi Liu, Peilin Jia, Zhongming Zhao +1 more

Papers

Driven by 47 papers — median percentile 47. Top paper: “Genome-Wide Correlation of DNA Methylation and Gene Expression in Postmortem Brain Tissues of Opioid Use Disorder Patients”.

Genome-Wide Correlation of DNA Methylation and Gene Expression in Postmortem Brain Tissues of Opioid Use Disorder Patients

The International Journal of Neuropsychopharmacology(2021)10.1093/ijnp/pyab043

N/A

1.3DataRank · unranked

40 citations

Yulin Dai, Emily Méndez, Ruifeng Hu, Gabriel R. Fries, Katherine Najera +7 more

CSEA-DB: an omnibus for human complex trait and cell type associations

Nucleic Acids Research(2020)10.1093/nar/gkaa1064

Top 20%

1.0DataRank

Top 20%31 citations

Ruifeng Hu, Astrid M. Manuel, Andi Liu, Peilin Jia, Zhongming Zhao +1 more

Deep generative neural network for accurate drug response imputation

Nature Communications(2021)10.1038/s41467-021-21997-5

N/A

0.680DataRank · unranked

92 citations

Ruifeng Hu, Guangsheng Pei, Yulin Dai, Yin‐Ying Wang, Zhongming Zhao +1 more

CD73-Dependent Adenosine Signaling through Adora2b Drives Immunosuppression in Ductal Pancreatic Cancer

Cancer Research(2023)10.1158/0008-5472.can-22-2553

N/A

0.617DataRank · unranked

60 citations

Kanchan Singh, Vidhi Chandra, Olivereen Le Roux, Yulin Dai, İsmet Şahin +24 more

Association of CXCR6 with COVID-19 severity: delineating the host genetic factors in transcriptomic regulation

Human Genetics(2021)10.1007/s00439-021-02305-z

N/A

0.601DataRank · unranked

54 citations

Junke Wang, Hyun-Hwan Jeong, Wenhao Chen, Peilin Jia, Zhongming Zhao +1 more

T cell exhaustion is associated with antigen abundance and promotes transplant acceptance

American Journal of Transplantation(2020)10.1111/ajt.15870

N/A

0.596DataRank · unranked

52 citations

Yulin Dai, Xiaolong Zhang, Guohua Wang, Xiang Xiao, Peilin Jia +4 more

Identifying candidate genes and drug targets for Alzheimer’s disease by an integrative network approach using genetic and brain region-specific proteomic data

Human Molecular Genetics(2022)10.1093/hmg/ddac124

Top 34%

0.585DataRank

Top 34%16 citations

Astrid M. Manuel, Yulin Dai, Brisa S. Fernandes, Nitesh Enduru, Peilin Jia +2 more

scGWAS: landscape of trait-cell type associations by integrating single-cell transcriptomics-wide and genome-wide association studies

Genome biology(2022)10.1186/s13059-022-02785-w

N/A

0.533DataRank · unranked

34 citations

Ruifeng Hu, Fangfang Yan, Yulin Dai, Zhongming Zhao, Peilin Jia

deCS : A Tool for Systematic Cell Type Annotations of Single-Cell RNA Sequencing Data Among Human Tissues

Genomics Proteomics & Bioinformatics(2022)10.1016/j.gpb.2022.04.001

N/A

0.483DataRank · unranked

24 citations

Fangfang Yan, Lukas M. Simon, Yulin Dai, Peilin Jia, Zhongming Zhao +1 more

An integrative, genomic, transcriptomic and network-assisted study to identify genes associated with human cleft lip with or without cleft palate

BMC Medical Genomics(2020)10.1186/s12920-020-0675-4

N/A

0.470DataRank · unranked

22 citations

Yulin Dai, Junichi Iwata, Zhongming Zhao, Peilin Jia, Fangfang Yan

Gene expression imputation and cell-type deconvolution in human brain with spatiotemporal precision and its implications for brain-related disorders

Genome Research(2020)10.1101/gr.265769.120

N/A

0.470DataRank · unranked

22 citations

Yin‐Ying Wang, Lukas M. Simon, Yulin Dai, Zhongming Zhao, Peilin Jia +1 more

A gene regulatory network approach harmonizes genetic and epigenetic signals and reveals repurposable drug candidates for multiple sclerosis

Human Molecular Genetics(2022)10.1093/hmg/ddac265

N/A

0.449DataRank · unranked

19 citations

Yulin Dai, Peilin Jia, Léorah Freeman, Zhongming Zhao, Astrid M. Manuel

Dense module searching for gene networks associated with multiple sclerosis

BMC Medical Genomics(2020)10.1186/s12920-020-0674-5

N/A

0.442DataRank · unranked

18 citations

Yulin Dai, Léorah Freeman, Peilin Jia, Zhongming Zhao, Astrid M. Manuel

Distinct effect of prenatal and postnatal brain expression across 20 brain disorders and anthropometric social traits: a systematic study of spatiotemporal modularity

Briefings in Bioinformatics(2021)10.1093/bib/bbab214

N/A

0.406DataRank · unranked

14 citations

Astrid M. Manuel, Brisa S. Fernandes, Yulin Dai, Zhongming Zhao, Peilin Jia

Prioritization of risk genes in multiple sclerosis by a refined Bayesian framework followed by tissue-specificity and cell type feature assessment

BMC Genomics(2022)10.1186/s12864-022-08580-y

N/A

0.373DataRank · unranked

11 citations

Astrid M. Manuel, Yulin Dai, Zhongming Zhao, Andi Liu

Characterization of genome-wide association study data reveals spatiotemporal heterogeneity of mental disorders

BMC Medical Genomics(2020)10.1186/s12920-020-00832-8

N/A

0.373DataRank · unranked

11 citations

Timothy O’Brien, Guangsheng Pei, Zhongming Zhao, Peilin Jia, Yulin Dai

DeepFace: Deep-learning-based framework to contextualize orofacial-cleft-related variants during human embryonic craniofacial development

Human Genetics and Genomics Advances(2024)10.1016/j.xhgg.2024.100312

N/A

0.360DataRank · unranked

10 citations

Toshiyuki Itai, Guangsheng Pei, Fangfang Yan, Yan Chu, Xiaoqian Jiang +7 more

Depletion of Adipose Stroma-Like Cancer-Associated Fibroblasts Potentiates Pancreatic Cancer Immunotherapy

Cancer Research Communications(2024)10.1158/2767-9764.crc-24-0298

N/A

0.352DataRank · unranked

8 citations

Alexes C. Daquinag, Yongmei Yu, Yulin Dai, Zhongming Zhao, Mikhail G. Kolonin +1 more

Systematic transcriptome profiling of hPSC-derived osteoblasts unveils CORIN's mastery in governing osteogenesis through CEBPD modulation

Journal of Biological Chemistry(2024)10.1016/j.jbc.2024.107494

N/A

0.317DataRank · unranked

5 citations

Mo-Fan Huang, An Xu, Xueqin Gao, Yuwen Huang, Trinh T. T. Phan +19 more

deCS : A Tool for Systematic Cell Type Annotations of Single-cell RNA Sequencing Data among Human Tissues

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.19.460993

N/A

0.292DataRank · unranked

6 citations

Fangfang Yan, Lukas M. Simon, Yulin Dai, Peilin Jia, Zhongming Zhao +1 more

scEMB: Learning context representation of genes based on large-scale single-cell transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.09.24.614685

N/A

0.241DataRank · unranked

4 citations

Chu Yan, Xiaoyang Li, Patrick G. Pilié, Yulin Dai, Kang‐Lin Hsieh

Investigating gene functions and single-cell expression profiles of de novo variants in orofacial clefts

Human Genetics and Genomics Advances(2024)10.1016/j.xhgg.2024.100313

N/A

0.208DataRank · unranked

3 citations

Fangfang Yan, Andi Liu, Yulin Dai, Chihiro Iwaya, Sarah W. Curtis +7 more

De novo mutations disturb early brain development more frequently than common variants in schizophrenia

American Journal of Medical Genetics Part B Neuropsychiatric Genetics(2023)10.1002/ajmg.b.32932

Top 72%

0.119DataRank

Top 72%1 citations

Peilin Jia, Yulin Dai, Jingchun Chen, Xiangning Chen, Zhongming Zhao +1 more

Disentangling accelerated cognitive decline from the normal aging process and unraveling its genetic components: A neuroimaging-based deep learning approach

Research Square(2023)10.21203/rs.3.rs-3328861/v1

N/A

0.104DataRank · unranked

1 citations

Yu‐Chun Hsu, Brisa S. Fernandes, Kai Zhang, Xiaoyang Li, Nitesh Enduru +5 more

CD8+ T cell differentiation into NK-like effector cells drives transplant rejection

Molecular Therapy(2026)10.1016/j.ymthe.2026.01.024

N/A

0.104DataRank · unranked

1 citations

Stephanie G. Yi, Yulin Dai, Luan Truong, Lillian W. Gaber, Richard J. Knight +7 more

Enhancing the utility of polygenic scores in Alzheimer’s disease through systematic curation and annotation

Frontiers in Genetics(2025)10.3389/fgene.2025.1507395

Top 78%

0.104DataRank

Top 78%1 citations

Yulin Dai, Nitesh Enduru, Zhongming Zhao, Savannah Mwesigwa

iGTP: learning interpretable cellular embedding for inferring biological mechanisms underlying single-cell transcriptomics

Briefings in Bioinformatics(2025)10.1093/bib/bbaf296

N/A

0DataRank · unranked

1 citations

Kai Zhang, Yan Chu, Lishan Yu, Xiaoyang Li, Na Hu +8 more

Predicting regulatory variants using a dense epigenomic mapped CNN model elucidated the molecular basis of trait-tissue associations

Nucleic Acids Research(2020)10.1093/nar/gkaa1137

N/A

0DataRank · unranked

23 citations

Ruifeng Hu, Yulin Dai, Astrid M. Manuel, Zhongming Zhao, Peilin Jia +1 more

Progression of prostate carcinoma is promoted by adipose stromal cell-secreted CXCL12 signaling in prostate epithelium

npj Precision Oncology(2021)10.1038/s41698-021-00160-9

N/A

0DataRank · unranked

42 citations

Alexes C. Daquinag, Songyeon Ahn, Achinto Saha, Yulin Dai, Zhongming Zhao +3 more

Investigating Cellular Trajectories in the Severity of COVID-19 and Their Transcriptional Programs Using Machine Learning Approaches

Genes(2021)10.3390/genes12050635

N/A

0DataRank · unranked

20 citations

Johnathan Jia, Yulin Dai, Lukas M. Simon, Zhongming Zhao, Hyun-Hwan Jeong

WebCSEA: web-based cell-type-specific enrichment analysis of genes

Nucleic Acids Research(2022)10.1093/nar/gkac392

N/A

0DataRank · unranked

151 citations

Ruifeng Hu, Andi Liu, Kyung Serk Cho, Astrid M. Manuel, Xiaoyang Li +4 more

Charting the proteome landscape in major psychiatric disorders: From biomarkers to biological pathways towards drug discovery

European Neuropsychopharmacology(2022)10.1016/j.euroneuro.2022.06.001

N/A

0DataRank · unranked

49 citations

Yulin Dai, Peilin Jia, Zhongming Zhao, Brisa S. Fernandes

Delineating COVID-19 immunological features using single-cell RNA sequencing

The Innovation(2022)10.1016/j.xinn.2022.100289

N/A

0DataRank · unranked

33 citations

Johnathan Jia, Yulin Dai, Wenhao Chen, Guangsheng Pei, Qiheng Yan +2 more

Adipose tissue–specific ablation of Ces1d causes metabolic dysregulation in mice

Life Science Alliance(2022)10.26508/lsa.202101209

N/A

0DataRank · unranked

29 citations

Xin Li, Li Yang, Shuyue Wang, Yulin Dai, Baharan Fekry +9 more

A Method for Bridging Population-Specific Genotypes to Detect Gene Modules Associated with Alzheimer’s Disease

Cells(2022)10.3390/cells11142219

N/A

0DataRank · unranked

6 citations

Peilin Jia, Zhongming Zhao, Assaf Gottlieb, Yulin Dai

Drug-Target Network Study Reveals the Core Target-Protein Interactions of Various COVID-19 Treatments

Genes(2022)10.3390/genes13071210

N/A

0DataRank · unranked

0 citations

Hui Yu, Qiheng Yan, Bingrui Li, Andi Liu, Wendao Liu +5 more

The transcription factor IRF4 determines the anti-tumor immunity of CD8+ T cells

iScience(2023)10.1016/j.isci.2023.108087

N/A

0DataRank · unranked

15 citations

Yulin Dai, Xiaolong Zhang, Hedong Zhang, Xiang Xiao, Jinfei Fu +7 more

Investigating cellular heterogeneity at the single-cell level by the flexible and mobile extrachromosomal circular DNA

Computational and Structural Biotechnology Journal(2023)10.1016/j.csbj.2023.01.025

N/A

0DataRank · unranked

11 citations

Yulin Dai, Jinze Li, Huihui Fan, Zhongming Zhao, Jiajinlong Kang

Gene expression in mice with endothelium-specific telomerase knockout

Frontiers in Cell and Developmental Biology(2023)10.3389/fcell.2023.1295072

N/A

0DataRank · unranked

5 citations

Yongmei Yu, Yulin Dai, Zhongming Zhao, Kristin Eckel‐Mahan, Mikhail G. Kolonin +1 more

GRPa-PRS: A risk stratification method to identify genetically-regulated pathways in polygenic diseases

medRxiv(2023)10.1101/2023.06.19.23291621

N/A

0DataRank · unranked

3 citations

Brisa S. Fernandes, Andi Liu, Jingchun Chen, Xiangning Chen, Zhongming Zhao +2 more

Cell-specific regulation of the circadian clock by BMAL1 in the paraventricular nucleus: Implications for regulation of systemic biological rhythms

Cell Reports(2024)10.1016/j.celrep.2024.114380

N/A

0DataRank · unranked

17 citations

Yulin Dai, Haichao Wei, Baharan Fekry, Sina Noori, Samay Shivshankar +8 more

GENEVIC: GENetic data Exploration and Visualization via Intelligent interactive Console

Bioinformatics(2024)10.1093/bioinformatics/btae500

N/A

0DataRank · unranked

6 citations

Savannah Mwesigwa, Yulin Dai, Xiaoqian Jiang, Zhongming Zhao, Anindita Nath

Disentangling Accelerated Cognitive Decline from the Normal Aging Process and Unraveling Its Genetic Components: A Neuroimaging-Based Deep Learning Approach

Journal of Alzheimer s Disease(2024)10.3233/jad-231020

N/A

0DataRank · unranked

5 citations

Yu-Chun Hsu, Brisa S. Fernandes, Kai Zhang, Xiaoyang Li, Nitesh Enduru +6 more

Revisiting the Relative Contribution of Common and Rare Genetic Variants to Attention-Deficit/Hyperactivity Disorder Among Diverse Populations

Biological Psychiatry(2024)10.1016/j.biopsych.2024.02.1007

N/A

0DataRank · unranked

0 citations

Brisa S. Fernandes, Zhongming Zhao, Yulin Dai

GRPa‐PRS: A risk stratification method to identify genetically‐regulated pathways in polygenic diseases

Alzheimer s & Dementia(2025)10.1002/alz.70779

N/A

0DataRank · unranked

1 citations

Brisa S. Fernandes, Andi Liu, Jingchun Chen, Xiangning Chen, Zhongming Zhao +2 more

Investigating prognostic features in high-grade serous ovarian cancer through gene regulatory network inference with single-cell transcriptomic profiles

Scientific Reports(2025)10.1038/s41598-025-22937-9

N/A

0DataRank · unranked

1 citations

Yulin Dai, Wendao Liu, Dung‐Fang Lee, Zhongning Zhao, Toshiyuki Itai

Single-cell multiome characterizing intercellular communication and intracellular regulation of epithelium and mesenchymal during secondary palate development in mice

Computational and Structural Biotechnology Journal(2025)10.1016/j.csbj.2025.09.031

N/A

0DataRank · unranked

0 citations

Yulin Dai, Andi Liu, Toshiyuki Itai, Fangfang Yan, Lukas M. Simon +2 more

Yulin Dai

Indexed papers

Top data-sharing exemplar

Papers