Elliot A. Hershberg

ORCID: 0000-0003-2068-3366

Also affiliated with Stanford University

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 11 papers. Top paper: “PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments”.

PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments

Nature Methods(2021)10.1038/s41592-021-01187-3

N/A

0.652DataRank · unranked

76 citations

Conor K. Camplisson, Jennie Close, Sahar Attar, Ryan Chern, Yuzhen Liu +4 more

The functional impact of rare variation across the regulatory cascade

Cell Genomics(2023)10.1016/j.xgen.2023.100401

N/A

0.526DataRank · unranked

15 citations

Nicole M. Ferraro, Benjamin J. Strober, François Aguet, Silva Kasela, Marios Arvanitis +33 more

JBrowse Jupyter: A Python interface to JBrowse 2

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.11.491552

N/A

0.241DataRank · unranked

4 citations

Elliot A. Hershberg, Emma Guo, Garrett Stevens, Colin Diesh, Peter Xie +7 more

JBrowse 2: A modular genome browser with views of synteny and structural variation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.28.501447

N/A

0DataRank · unranked

31 citations

Garrett Stevens, Peter Xie, Teresa De Jesus Martinez, Elliot A. Hershberg, Angel Leung +15 more

JBrowse 2: a modular genome browser with views of synteny and structural variation

Genome biology(2023)10.1186/s13059-023-02914-z

N/A

0DataRank · unranked

880 citations

Garrett Stevens, Peter Xie, Teresa De Jesus Martinez, Elliot A. Hershberg, Angel Leung +15 more

Cohesin controls X chromosome structure remodeling and X-reactivation during mouse iPSC-reprogramming

Proceedings of the National Academy of Sciences(2023)10.1073/pnas.2213810120

N/A

0DataRank · unranked

12 citations

Maria Victoria Neguembor, Elliot A. Hershberg, Ruslan I. Sadreyev, Kazuki Kurimoto, Yukihiro Yabuta +10 more

JBrowse Jupyter: a Python interface to JBrowse 2

Bioinformatics(2023)10.1093/bioinformatics/btad032

N/A

0DataRank · unranked

7 citations

Elliot A. Hershberg, Emma Guo, Garrett Stevens, Colin Diesh, Peter Xie +7 more

3D mapping and accelerated super-resolution imaging of the human genome using in situ sequencing

Nature Methods(2020)10.1038/s41592-020-0890-0

N/A

0DataRank · unranked

153 citations

Shyamtanu Chattoraj, David Castillo, Son C. Nguyen, Guy Nir, Antonios Lioutas +10 more

Multiomic characterization of RNA microenvironments by oligonucleotide-mediated proximity-interactome mapping

Nature Methods(2024)10.1038/s41592-024-02457-6

N/A

0DataRank · unranked

38 citations

Evan E. Kania, Diana Q. Lei, Rose Fields, Christopher D. McGann, Daphnée M. Marciniak +10 more

PaintSHOP enables the interactive design of transcriptome- and genome-scale oligonucleotide FISH experiments

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.05.188797

N/A

0DataRank · unranked

12 citations

Jennie Close, Conor K. Camplisson, Sahar Attar, Ryan Chern, Yuzhen Liu +4 more

JBrowseR: an R interface to the JBrowse 2 genome browser

Bioinformatics(2021)10.1093/bioinformatics/btab459

N/A

0DataRank · unranked

26 citations

Garrett Stevens, Colin Diesh, Peter Xie, Teresa De Jesus Martinez, Robert Buels +3 more