Scott A. Oakes

ORCID: 0000-0003-2099-2249

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 20 papers. Top paper: “Endoplasmic Reticulum Stress Signaling in Cancer Cells”.

Endoplasmic Reticulum Stress Signaling in Cancer Cells

American Journal Of Pathology(2020)10.1016/j.ajpath.2020.01.010

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0DataRank · unranked

413 citations

Scott A. Oakes

The E3 ligase TRIM1 ubiquitinates LRRK2 and controls its localization, degradation, and toxicity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.21.336578

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0DataRank · unranked

2 citations

Farbod Shavarebi, Molly FitzGibbon, Elizabeth M. Earley, Hannah Ahrendt, Lotus Lum +22 more

Cannabidiol Inhibits SARS-CoV-2 Replication and Promotes the Host Innate Immune Response

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.10.432967

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0DataRank · unranked

64 citations

Dongbo Yang, Vlad Nicolaescu, Thomas J. Best, Takashi Ohtsuki, Shao‐Nong Chen +16 more

SARS-CoV-2 diverges from other betacoronaviruses in only partially activating the IRE1α/XBP1 ER stress pathway in human lung-derived cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.30.474519

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0DataRank · unranked

5 citations

David M. Renner, Diane Silva, Dongbo Yang, Nicholas A. Parenti, Kaeri M. Medina +20 more

Type I but Not Type II Calreticulin Mutations Activate the IRE1α/XBP1 Pathway of the Unfolded Protein Response to Drive Myeloproliferative Neoplasms

Blood Cancer Discovery(2022)10.1158/2643-3230.bcd-21-0144

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0DataRank · unranked

34 citations

Yassmin A. Elbanna, Katarzyna Kuryłowicz, Michele Ciboddo, Harrison S. Greenbaum, Nicole S. Arellano +23 more

SARS-CoV-2 Diverges from Other Betacoronaviruses in Only Partially Activating the IRE1α/XBP1 Endoplasmic Reticulum Stress Pathway in Human Lung-Derived Cells

mBio(2022)10.1128/mbio.02415-22

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0DataRank · unranked

29 citations

David M. Renner, Diane Silva, Dongbo Yang, Nicholas A. Parenti, Kaeri M. Medina +20 more

The E3 ligase TRIM1 ubiquitinates LRRK2 and controls its localization, degradation, and toxicity

The Journal of Cell Biology(2022)10.1083/jcb.202010065

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0DataRank · unranked

18 citations

Farbod Shavarebi, Molly FitzGibbon, Elizabeth M. Earley, Hannah Ahrendt, Lotus Lum +22 more

Integrated Physiology of the Exocrine and Endocrine Compartments in Pancreatic Diseases

Pancreas(2022)10.1097/mpa.0000000000002170

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11 citations

Minoti V. Apte, Laufey T. Ámundadóttir, Alexandra Alvarsson, Steven E. Artandi, Melena D. Bellin +29 more

Acute Recurrent Pancreatitis in a Child With INS-Related Monogenic Diabetes and a Heterozygous Pathogenic CFTR Mutation

Journal of the Endocrine Society(2022)10.1210/jendso/bvac182

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0 citations

Balamurugan Kandasamy, Tiana Bowden, Ruba Azzam, Scott A. Oakes, Louis H. Philipson +2 more

Integrated Physiology of the Exocrine and Endocrine Compartments in Pancreatic Diseases: Workshop Proceedings

Diabetes(2023)10.2337/db22-0942

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0DataRank · unranked

12 citations

Minoti V. Apte, Laufey T. Ámundadóttir, Alexandra Alvarsson, Steven E. Artandi, Melena D. Bellin +29 more

Deletion of the Unfolded Protein Response Transducer IRE1α Is Detrimental to Aging Photoreceptors and to ER Stress-Mediated Retinal Degeneration

Investigative Ophthalmology & Visual Science(2023)10.1167/iovs.64.4.30

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0DataRank · unranked

9 citations

Sean P. Gorman, Yien–Ming Kuo, Takao Iwawaki, Scott A. Oakes, Feroz R. Papa +2 more

Stress and human health in diabetes: A report from the 19th Chicago Biomedical Consortium symposium

Journal of Clinical and Translational Science(2023)10.1017/cts.2023.646

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1 citations

Rohit N. Kulkarni, Pingwen Xu, Tina Drossos, Krista A Varady, Kristen L. Knutson +16 more

Dissecting tumor transcriptional heterogeneity from single-cell RNA-seq data by generalized binary covariance decomposition

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.15.553436

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5 citations

Peter Carbonetto, Jason Willwerscheid, Scott A. Oakes, Kay F. Macleod, Matthew Stephens +1 more

Inhibition of the Eukaryotic Initiation Factor-2-α Kinase PERK Decreases Risk of Autoimmune Diabetes in Mice

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.10.06.561126

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0DataRank · unranked

1 citations

Fei Huang, Jacob R. Enriquez, Jiayi E. Wang, Jennifer B. Nelson, Titli Nargis +20 more

Inflammation-Induced Claudin-2 Upregulation Limits Pancreatitis Progression by Enhancing Tight Junction-Controlled Pancreatic Ductal Transport

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.01.555960

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0DataRank · unranked

0 citations

Yueying Li, Junjie Xing, Melissa Tracy, Kristin Wannemo, Aysha Holder +15 more

Inhibition of the eukaryotic initiation factor-2α kinase PERK decreases risk of autoimmune diabetes in mice

Journal of Clinical Investigation(2024)10.1172/jci176136

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0DataRank · unranked

20 citations

Fei Huang, Jacob R. Enriquez, Jiayi E. Wang, Jennifer B. Nelson, Titli Nargis +20 more

The Integrated Stress Response in Pancreatic Development, Tissue Homeostasis, and Cancer

Gastroenterology(2024)10.1053/j.gastro.2024.05.009

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0DataRank · unranked

15 citations

Leah M. Ziolkowski, Kay F. Macleod, Scott A. Oakes, Greg Malnassy

Direct inhibition of tumor hypoxia response with synthetic transcriptional repressors

Nature Chemical Biology(2024)10.1038/s41589-024-01716-z

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0DataRank · unranked

8 citations

Long C. Nguyen, Dongbo Yang, Christopher Dann, Deborah Thomas, Madeline Henn +6 more

Unfolding emergency calls stress granules to the ER

Nature Cell Biology(2024)10.1038/s41556-024-01434-7

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0DataRank · unranked

4 citations

Scott A. Oakes, David Pincus

Dissecting tumor transcriptional heterogeneity from single-cell RNA-seq data by generalized binary covariance decomposition

Nature Genetics(2025)10.1038/s41588-024-01997-z

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0DataRank · unranked

12 citations

Peter Carbonetto, Jason Willwerscheid, Scott A. Oakes, Kay F. Macleod, Matthew Stephens +1 more