Jie Wu

Biochemistry, Genetics and Molecular BiologyNeuroscienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

5.8Author DataRank

Indexed papers

4in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 4 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Answer ALS, a large-scale resource for sporadic and familial ALS combining clinical and multi-omics data from induced pluripotent cell lines

Nature Neuroscience(2022)10.1038/s41593-021-01006-0

Top 7%

3.1DataRank

Top 7%159 citations

Terri G. Thompson, Jonathan Li, Julia Kaye, Ryan G. Lim, Jie Wu +95 more

Papers

Driven by 36 papers — median percentile 72. Top paper: “Answer ALS, a large-scale resource for sporadic and familial ALS combining clinical and multi-omics data from induced pluripotent cell lines”.

Answer ALS, a large-scale resource for sporadic and familial ALS combining clinical and multi-omics data from induced pluripotent cell lines

Nature Neuroscience(2022)10.1038/s41593-021-01006-0

Top 7%

3.1DataRank

Top 7%159 citations

Terri G. Thompson, Jonathan Li, Julia Kaye, Ryan G. Lim, Jie Wu +95 more

Spatial transcriptomics using combinatorial fluorescence spectral and lifetime encoding, imaging and analysis

Nature Communications(2022)10.1038/s41467-021-27798-0

N/A

1.9DataRank · unranked

77 citations

Alexander Vallmitjana, Joshua Gu, Kieu La, Qi Xu, Jesus Flores +11 more

Large-scale differentiation of iPSC-derived motor neurons from ALS and control subjects

Neuron(2023)10.1016/j.neuron.2023.01.010

Top 11%

1.8DataRank

Top 11%90 citations

Ryan G. Lim, Jie Wu, Aaron P. Frank, Loren Ornelas, Lindsay Panther +20 more

Integrated analysis of multimodal single-cell data with structural similarity

Nucleic Acids Research(2022)10.1093/nar/gkac781

N/A

0.705DataRank · unranked

109 citations

Laiyi Fu, Jie Wu, Qinke Peng, Qing Nie, Jing Zhang +2 more

Huntington disease oligodendrocyte maturation deficits revealed by single-nucleus RNAseq are rescued by thiamine-biotin supplementation

Nature Communications(2022)10.1038/s41467-022-35388-x

N/A

0.659DataRank · unranked

80 citations

Osama Al‐Dalahmah, Jie Wu, Maxwell P. Gold, Jack C. Reidling, Guomei Tang +24 more

An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients

iScience(2021)10.1016/j.isci.2021.103221

N/A

0.593DataRank · unranked

51 citations

Justin Kwan, Dhruv Sareen, James R. Broach, Zachary Simmons, Ximena Arcila-Londono +92 more

Chromatin remodeling protein HELLS is critical for retinoblastoma tumor initiation and progression

Oncogenesis(2020)10.1038/s41389-020-0210-7

N/A

0.553DataRank · unranked

39 citations

Aditi Mehta, Stephanie Wu, Jie Wu, Yijun Gu, Jingtian Wang +4 more

Single-nuclei transcriptome analysis of Huntington disease iPSC and mouse astrocytes implicates maturation and functional deficits

iScience(2022)10.1016/j.isci.2022.105732

N/A

0.510DataRank · unranked

29 citations

Edsel M. Abud, Mara S. Burns, Jie Wu, Sarah Hernandez, Nicolette R. McClure +14 more

OVOL1 Regulates Psoriasis-Like Skin Inflammation and Epidermal Hyperplasia

Journal of Investigative Dermatology(2020)10.1016/j.jid.2020.10.025

N/A

0.505DataRank · unranked

28 citations

Remy Vu, Morgan Dragan, Daniel Haensel, Guadalupe Gutierrez, Quy Nguyen +10 more

UHRF1 overexpression promotes osteosarcoma metastasis through altered exosome production and AMPK/SEMA3E suppression

Oncogenesis(2022)10.1038/s41389-022-00430-6

N/A

0.489DataRank · unranked

25 citations

Ahhyun Kim, Yijun Gu, Daniel I. Martinez, Loredana Zocchi, Claire C. Chen +7 more

SAILER: scalable and accurate invariant representation learning for single-cell ATAC-seq processing and integration

Bioinformatics(2021)10.1093/bioinformatics/btab303

N/A

0.442DataRank · unranked

18 citations

Laiyi Fu, Jie Wu, Qinke Peng, Qing Nie, Jing Zhang +2 more

NeuroLINCS Proteomics: Defining human-derived iPSC proteomes and protein signatures of pluripotency

Scientific Data(2023)10.1038/s41597-022-01687-7

Top 44%

0.427DataRank

Top 44%11 citations

Vineet Vaibhav, Ronald J. Holewinski, Vidya Venkatraman, Victoria Dardov, Danica-Mae Manalo +32 more

Disease related changes in ATAC-seq of iPSC-derived motor neuron lines from ALS patients and controls

Nature Communications(2024)10.1038/s41467-024-47758-8

N/A

0.396DataRank · unranked

13 citations

Kelsey Valentine, Velina Kozareva, Aneesh Donde, Aaron P. Frank, Susan Lei +95 more

Distinct molecular patterns in R6/2 HD mouse brain: Insights from spatiotemporal transcriptomics

Neuron(2025)10.1016/j.neuron.2025.05.014

Top 48%

0.380DataRank

Top 48%9 citations

Ricardo Miramontes, Jie Wu, Ravinder Gulia, Madhu Sudhana Saddala, Alice Lau +7 more

Intersecting impact of CAG repeat and huntingtin knockout in stem cell-derived cortical neurons

Neurobiology of Disease(2025)10.1016/j.nbd.2025.106914

N/A

0.241DataRank · unranked

4 citations

Matthew Leventhal, Stephanie Lam, Yuxin Xu, Yi Wang, Keona Q. Wang +26 more

An integrated multi-omic analysis of iPSC-derived motor neurons from C9ORF72 ALS patients

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.01.362269

N/A

0.224DataRank · unranked

3 citations

Emilda Gomez, Lindsay Panther, Aaron P. Frank, Susan Lei, Berhan Mandefro +40 more

UHRF1 upregulation mediates exosome release and tumor progression in osteosarcoma

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.24.113647

N/A

0.208DataRank · unranked

3 citations

Ahhyun Kim, Loredana Zocchi, Claire Chen, Jocelyne Lopez, Kelsey Salcido +3 more

Single nuclei RNAseq analysis of HD mouse models and human brain reveals impaired oligodendrocyte maturation and potential role for thiamine metabolism

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.27.497613

N/A

0.174DataRank · unranked

2 citations

Osama Al‐Dalahmah, Jie Wu, Maxwell P. Gold, Jack C. Reidling, Guomei Tang +23 more

Uncovering minimal pathways in melanoma initiation

Nature Communications(2025)10.1038/s41467-025-60742-0

N/A

0.165DataRank · unranked

2 citations

Jessica Shiu, Chi‐Fen Chen, Jie Wu, Peijie Zhou, Sahil S. Telang +6 more

XIST Loss Induces Variable Transcriptional Responses Dependent on Cell States

Non-Coding RNA(2025)10.3390/ncrna11050067

N/A

0DataRank · unranked

0 citations

Ikrame Naciri, Jie Wu, Sha Sun, Dongning Chen

Chronic copper exposure directs microglia towards degenerative expression signatures in wild-type and J20 mouse model of Alzheimer’s disease

Journal of Trace Elements in Medicine and Biology(2020)10.1016/j.jtemb.2020.126578

N/A

0DataRank · unranked

33 citations

Carlos J. Rodríguez‐Ortiz, Heng-Wei Hsu, Jie Wu, Joannee Zumkehr, Jason Kilian +4 more

UFold: Fast and Accurate RNA Secondary Structure Prediction with Deep Learning

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.17.254896

N/A

0DataRank · unranked

29 citations

Yingxin Cao, Jie Wu, Qinke Peng, Qing Nie, Xiaohui Xie +1 more

UFold: fast and accurate RNA secondary structure prediction with deep learning

Nucleic Acids Research(2021)10.1093/nar/gkab1074

N/A

0DataRank · unranked

284 citations

Yingxin Cao, Jie Wu, Qinke Peng, Qing Nie, Xiaohui Xie +1 more

An in vitro vascularized micro-tumor model of human colorectal cancer recapitulates in vivo responses to standard-of-care therapy

Lab on a Chip(2021)10.1039/d0lc01216e

N/A

0DataRank · unranked

126 citations

Silva Movsesyan, Quy Nguyen, Giselle Burton-Sojo, Ani Tankazyan, Jie Wu +17 more

PIAS1 modulates striatal transcription, DNA damage repair, and SUMOylation with relevance to Huntington’s disease

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2021836118

N/A

0DataRank · unranked

55 citations

Charlene Smith-Geater, Alejandro Mas Monteys, Subrata Pradhan, Ryan G. Lim, Peter Langfelder +25 more

Microglia Do Not Restrict SARS-CoV-2 Replication following Infection of the Central Nervous System of K18-Human ACE2 Transgenic Mice

Journal of Virology(2021)10.1128/jvi.01969-21

N/A

0DataRank · unranked

31 citations

Yuting Cheng, Susana Furman, Collin Pachow, Lindsay A. Hohsfield, Charlene Smith-Geater +13 more

SAILER: Scalable and Accurate Invariant Representation Learning for Single-Cell ATAC-Seq Processing and Integration

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.01.28.428689

N/A

0DataRank · unranked

5 citations

Laiyi Fu, Jie Wu, Qinke Peng, Qing Nie, Jing Zhang +2 more

Microglia do not restrict SARS-CoV-2 replication following infection of the central nervous system of K18-hACE2 transgenic mice

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.15.468761

N/A

0DataRank · unranked

5 citations

Yuting Cheng, Susana Furman, Collin Pachow, Lindsay A. Hohsfield, Charlene Smith-Geater +13 more

Spatial transcriptomics using combinatorial fluorescence spectral and lifetime encoding, imaging and analysis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.22.449468

N/A

0DataRank · unranked

3 citations

Alexander Vallmitjana, Joshua Gu, Kieu La, Qi Xu, Jesus Flores +11 more

An altered extracellular matrix–integrin interface contributes to Huntington’s disease-associated CNS dysfunction in glial and vascular cells

Human Molecular Genetics(2022)10.1093/hmg/ddac303

N/A

0DataRank · unranked

14 citations

Ryan G. Lim, Tarik Seref Onur, Mark Dane, Rebecca Smith, Keona Q. Wang +14 more

Integrated transcriptome analysis of Huntington’s disease iPSC-derived and mouse astrocytes implicates dysregulated synaptogenesis, actin, and astrocyte maturation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.28.501170

N/A

0DataRank · unranked

1 citations

Edsel M. Abud, Mara S. Burns, Jie Wu, Sarah Hernandez, Nicolette R. Geller +14 more

Transplanted human neural stem cells rescue phenotypes in zQ175 Huntington’s disease mice and innervate the striatum

Molecular Therapy(2023)10.1016/j.ymthe.2023.10.003

N/A

0DataRank · unranked

14 citations

Jack C. Reidling, Carlos Cepeda, Jie Wu, Ryan G. Lim, Alice Lau +12 more

Mowat-Wilson syndrome factor ZEB2 controls early formation of human neural crest through BMP signaling modulation

Stem Cell Reports(2023)10.1016/j.stemcr.2023.10.002

N/A

0DataRank · unranked

12 citations

Maneeshi S. Prasad, Czarina Juan-Sing, Lipsa J. Patel, Jacqueline C. Hernández, Jie Wu +2 more

Uncovering Minimal Pathways in Melanoma Initiation

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.08.570336

N/A

0DataRank · unranked

0 citations

Jessica Shiu, Chi‐Fen Chen, Jie Wu, Peijie Zhou, Sahil S. Telang +5 more

Periodic heat waves-induced neuronal etiology in the elderly is mediated by gut-liver-brain axis: a transcriptome profiling approach

Scientific Reports(2024)10.1038/s41598-024-60664-9

N/A

0DataRank · unranked

11 citations

Punnag Saha, Dipro Bose, Ayushi Trivedi, Madhura More, Christina Lin +4 more

Aberrant Development Corrected in Adult-Onset Huntington's Disease iPSC-Derived Neuronal Cultures via WNT Signaling Modulation

Stem Cell Reports(2020)10.1016/j.stemcr.2020.01.015

N/A

0DataRank · unranked

80 citations

Sarah Hernandez, Ryan G. Lim, Miriam Adam, Jie Wu, Jennifer Stocksdale +12 more

Jie Wu

Indexed papers

Top data-sharing exemplar

Papers