Brock C. Christensen

Also affiliated with Dartmouth Psychiatric Research Center

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.3Author DataRank

Indexed papers

6in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 6 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Navigating the Hydroxymethylome: Experimental Biases and Quality Control Tools for the Tandem Bisulfite and Oxidative Bisulfite Illumina Microarrays

Epigenomics(2022)10.2217/epi-2021-0490

Top 36%

0.535DataRank

Top 36%9 citations

Min Kyung Lee, Laurent Perreard, KARL T. KELSEY, Brock C. Christensen, Lucas A. Salas +1 more

Papers

Driven by 102 papers — median percentile 47. Top paper: “Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling”.

Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling

Nature Communications(2022)10.1038/s41467-021-27864-7

N/A

5.4DataRank · unranked

290 citations

Ze Zhang, Devin C. Koestler, Rondi A. Butler, Helen M. Hansen, Annette M. Molinaro +4 more

Enhanced cell deconvolution of peripheral blood using DNA methylation for high-resolution immune profiling

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.04.11.439377

N/A

1.2DataRank · unranked

23 citations

Ze Zhang, Devin C. Koestler, Rondi A. Butler, Helen M. Hansen, Annette M. Molinaro +4 more

Enrichment of CpG island shore region hypermethylation in epigenetic breast field cancerization

Epigenetics(2020)10.1080/15592294.2020.1747748

N/A

1.1DataRank · unranked

47 citations

Alexander J. Titus, Lucas A. Salas, Owen M. Wilkins, Chelsey Mullen, Kelly J. Gregory +7 more

A phase 1 study of combined guadecitabine and cisplatin in platinum refractory germ cell cancer

Cancer Medicine(2020)10.1002/cam4.3583

N/A

1.1DataRank · unranked

40 citations

Zeeshan Fazal, Ratnakar Singh, Emmanuel Bikorimana, Nabil Adra, Nasser H. Hanna +9 more

Aging and Environmental Exposures Alter Tissue-Specific DNA Methylation Dependent upon CpG Island Context

PLoS Genetics(2009)10.1371/journal.pgen.1000602

N/A

1.1DataRank · unranked

1097 citations

E. Andres Houseman, Carmen J. Marsit, Shichun Zheng, Margaret R. Wrensch, Joseph L. Wiemels +9 more

Association of diet with per- and polyfluoroalkyl substances in plasma and human milk in the New Hampshire Birth Cohort Study

The Science of The Total Environment(2024)10.1016/j.scitotenv.2024.173157

N/A

0.929DataRank · unranked

26 citations

Jiang Gui, Caitlin G. Howe, Jennifer A. Emond, Rachel Criswell, Lisa G. Gallagher +8 more

Interactions of Age and Blood Immune Factors and Noninvasive Prediction of Glioma Survival

JNCI Journal of the National Cancer Institute(2021)10.1093/jnci/djab195

N/A

0.860DataRank · unranked

19 citations

John K. Wiencke, Gayathri Warrier, Devin C. Koestler, Pranathi Chunduru, Ji Yoon Lee +13 more

Weight management intervention identifies association of decreased DNA methylation age with improved functional age measures in older adults with obesity

Clinical Epigenetics(2021)10.1186/s13148-021-01031-7

N/A

0.851DataRank · unranked

22 citations

Brock C. Christensen, John A. Batsis, Curtis L. Petersen

MethylNet: an automated and modular deep learning approach for DNA methylation analysis

BMC Bioinformatics(2020)10.1186/s12859-020-3443-8

N/A

0.737DataRank · unranked

135 citations

Alexander J. Titus, Curtis L. Petersen, Youdinghuan Chen, Lucas A. Salas, Brock C. Christensen +1 more

Large‐scale validation study of an improved semiautonomous urine cytology assessment tool: AutoParis‐X

Cancer Cytopathology(2023)10.1002/cncy.22732

N/A

0.736DataRank · unranked

16 citations

Natt Chan, Jonathan D. Marotti, Darcy A. Kerr, Edward J. Gutmann, Ryan Glass +6 more

A deep learning algorithm to detect cutaneous squamous cell carcinoma on frozen sections in Mohs micrographic surgery: A retrospective assessment

Experimental Dermatology(2023)10.1111/exd.14949

N/A

0.651DataRank · unranked

11 citations

Gokul Raghavendra Srinivasan, Rachael Chacko, Sophie Chen, Anish Suvarna, Louis Vaickus +9 more

Intraoperative margin assessment for basal cell carcinoma with deep learning and histologic tumor mapping to surgical site

npj Precision Oncology(2024)10.1038/s41698-023-00477-7

N/A

0.591DataRank · unranked

15 citations

Matthew Davis, Rachael Chacko, Michael J. Davis, Lucy Fu, Tarushii Goel +10 more

MarZIC: A Marginal Mediation Model for Zero-Inflated Compositional Mediators with Applications to Microbiome Data

Genes(2022)10.3390/genes13061049

N/A

0.586DataRank · unranked

16 citations

A. James O’Malley, Susmita Datta, Raad Z. Gharaibeh, Christian Jobin, MARGARET R. KARAGAS +6 more

Navigating the Hydroxymethylome: Experimental Biases and Quality Control Tools for the Tandem Bisulfite and Oxidative Bisulfite Illumina Microarrays

Epigenomics(2022)10.2217/epi-2021-0490

Top 36%

0.535DataRank

Top 36%9 citations

Min Kyung Lee, Laurent Perreard, KARL T. KELSEY, Brock C. Christensen, Lucas A. Salas +1 more

Genome-Scale DNA Methylation Analysis Identifies Repeat Element Alterations that Modulate the Genomic Stability of Melanocytic Nevi

Journal of Investigative Dermatology(2021)10.1016/j.jid.2021.11.025

N/A

0.483DataRank · unranked

24 citations

Drew T. Bergman, Lucas A. Salas, Lisa N. Tom, Jean-Marie Tan, Antonia Laino +7 more

Genome-Scale Methylation Analysis Identifies Immune Profiles and Age Acceleration Associations with Bladder Cancer Outcomes

Cancer Epidemiology Biomarkers & Prevention(2023)10.1158/1055-9965.epi-23-0331

Top 40%

0.480DataRank

Top 40%11 citations

Lucas A. Salas, John K. Wiencke, Devin C. Koestler, Annette M. Molinaro, ANGELINE S. ANDREW +5 more

Potential to Enhance Large Scale Molecular Assessments of Skin Photoaging through Virtual Inference of Spatial Transcriptomics from Routine Staining

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.30.551188

N/A

0.477DataRank · unranked

7 citations

Matthew Davis, Matthew LeBoeuf, Michael Fatemi, Zarif Azher, Yunrui Lu +12 more

DNA methylation as a pharmacodynamic marker of glucocorticoid response and glioma survival

Nature Communications(2022)10.1038/s41467-022-33215-x

N/A

0.464DataRank · unranked

21 citations

Annette M. Molinaro, Gayathri Warrier, Terri Rice, Jennifer Clarke, Jennie Taylor +14 more

Using Satellite Images and Deep Learning to Identify Associations Between County-Level Mortality and Residential Neighborhood Features Proximal to Schools: A Cross-Sectional Study

Frontiers in Public Health(2021)10.3389/fpubh.2021.766707

N/A

0.446DataRank · unranked

7 citations

Rebecca M. Lebeaux, Anne G. Hoen, Brock C. Christensen, Louis Vaickus, Todd A. MacKenzie +1 more

Assessment of immune cell profiles among post-menopausal women in the Women’s Health Initiative using DNA methylation-based methods

Clinical Epigenetics(2023)10.1186/s13148-023-01488-8

N/A

0.416DataRank · unranked

15 citations

Alex P. Reiner, Simin Liu, Robert B. Wallace, Annette M. Molinaro, Lucas A. Salas +5 more

Alteration of DNA Methyltransferases by Eribulin Elicits Broad DNA Methylation Changes with Potential Therapeutic Implications for Triple-Negative Breast Cancer

Epigenomics(2024)10.2217/epi-2023-0339

N/A

0.381DataRank · unranked

6 citations

Min Kyung Lee, Kristen E. Muller, W. Todd Miller, Diwakar R. Pattabiraman, Brock C. Christensen +1 more

Widespread redundancy in -omics profiles of cancer mutation states

Genome Biology(2022)10.1186/s13059-022-02705-y

N/A

0.345DataRank · unranked

9 citations

Brock C. Christensen, Maria Chikina, Casey S. Greene, Jake Crawford

Mixed Effects Machine Learning Models for Colon Cancer Metastasis Prediction using Spatially Localized Immuno-Oncology Markers

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.01.454649

N/A

0.345DataRank · unranked

9 citations

Carly A. Bobak, Mustafa Nasir-Moin, Eren M. Veziroglu, Scott Palisoul, Rachael E. Barney +5 more

Journey across epidemiology’s third variables: an anesthesiologist’s guide for successfully navigating confounding, mediation, and effect modification

Regional Anesthesia & Pain Medicine(2021)10.1136/rapm-2020-101984

N/A

0.323DataRank · unranked

7 citations

Rebecca M. Lebeaux, Brock C. Christensen, Tor D. Tosteson, Yvon F. Bryan, Joshua Levy

Identifying tumor type and cell type-specific gene expression alterations in pediatric central nervous system tumors

Nature Communications(2024)10.1038/s41467-024-47712-8

Top 53%

0.317DataRank

Top 53%5 citations

Nasim Azizgolshani, Joshua A. Shapiro, Lananh Nguyen, Fred Kolling, George Zanazzi +3 more

Extensive epigenomic dysregulation is a hallmark of homologous recombination deficiency in triple‐negative breast cancer

International Journal of Cancer(2024)10.1002/ijc.35274

N/A

0.315DataRank · unranked

6 citations

Lucas A. Salas, Jonathan D. Marotti, Nicole P. Jenkins, Chao Cheng, Todd W. Miller +3 more

Quantitative proteomics analysis of triple-negative breast cancers

npj Precision Oncology(2025)10.1038/s41698-025-00907-8

N/A

0.305DataRank · unranked

5 citations

Jonathan D. Marotti, Youdinghuan Chen, Barbara Karakyriakou, Roberto Salgado, Brock C. Christensen +3 more

Evaluation of cross-platform compatibility of a DNA methylation-based glucocorticoid response biomarker

Clinical Epigenetics(2022)10.1186/s13148-022-01352-1

N/A

0.274DataRank · unranked

3 citations

John K. Wiencke, Gayathri Warrier, Helen M. Hansen, Lucie McCoy, Terri Rice +10 more

Identification of a foetal epigenetic compartment in adult human kidney

Epigenetics(2021)10.1080/15592294.2021.1900027

N/A

0.272DataRank · unranked

4 citations

Ze Zhang, Devin C. Koestler, Lucas A. Salas, Annette M. Molinaro, Brock C. Christensen +2 more

Spatial Omics Driven Crossmodal Pretraining Applied to Graph-based Deep Learning for Cancer Pathology Analysis

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.30.551187

N/A

0.269DataRank · unranked

5 citations

Michael Fatemi, Yunrui Lu, Gokul Raghavendra Srinivasan, Alos Diallo, Brock C. Christensen +7 more

Enrichment of a neutrophil-like monocyte transcriptional state in glioblastoma myeloid suppressor cells

Research Square(2023)10.21203/rs.3.rs-3793353/v1

N/A

0.252DataRank · unranked

3 citations

Emily Nissen, Devin C. Koestler, Stanley Tamaki, Courtney Tamaki, Helen M. Hansen +12 more

Associations of per- and polyfluoroalkyl substances with human milk metabolomic profiles in a rural North American cohort

Environmental Epidemiology(2024)10.1097/ee9.0000000000000352

N/A

0.241DataRank · unranked

4 citations

Julia A. Bauer, Brock C. Christensen, Jennifer L. Meijer, Lisa A. Peterson, Carin Huset +4 more

Widespread redundancy in -omics profiles of cancer mutation states

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.27.466140

N/A

0.241DataRank · unranked

4 citations

Brock C. Christensen, Maria Chikina, Casey S. Greene, Jake Crawford

Lung-kidney axis in cystic fibrosis: Early urinary markers of kidney injury correlate with neutrophil activation and worse lung function

Journal of Cystic Fibrosis(2025)10.1016/j.jcf.2024.12.007

N/A

0.241DataRank · unranked

4 citations

Himanshu Ballav Goswami, Katherine Sessions, Lindsay Mendyka, Brenna Kerin, Irma Vlasac +11 more

Lineage plasticity enables low-ER luminal tumors to evolve and gain basal-like traits

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.25.517090

N/A

0.217DataRank · unranked

3 citations

Sundis Mahmood, Nevena B. Ognjenovic, Min Kyung Lee, Owen M. Wilkins, Brock C. Christensen +3 more

Maternal diet quality and circulating extracellular vesicle and particle miRNA during pregnancy

European Journal of Nutrition(2025)10.1007/s00394-025-03589-x

N/A

0.211DataRank · unranked

3 citations

Yuting Wang, Diane Gilbert-Diamond, David A. Armstrong, Anne G. Hoen, Megan E. Romano +7 more

Glioma immune microenvironment composition calculator (GIMiCC): a method of estimating the proportions of eighteen cell types from DNA methylation microarray data

Acta Neuropathologica Communications(2024)10.1186/s40478-024-01874-0

N/A

0.208DataRank · unranked

3 citations

John K. Wiencke, Ze Zhang, Annette M. Molinaro, Helen M. Hansen, Devin C. Koestler +4 more

Periconceptional and Prenatal Exposure to Metals and Extracellular Vesicle and Particle miRNAs in Human Milk: A Pilot Study

Exposure and Health(2022)10.1007/s12403-022-00520-1

N/A

0.208DataRank · unranked

3 citations

David A. Armstrong, Meghan E. Muse, Diane Gilbert‐Diamond, Jiang Gui, Anne G. Hoen +6 more

Hydroxymethylation alterations in progenitor-like cell types of pediatric central nervous system tumors are associated with cell type-specific transcriptional changes

Research Square(2023)10.21203/rs.3.rs-2517758/v1

N/A

0.104DataRank · unranked

1 citations

Nasim Azizgolshani, Ze Zhang, Laurent Perreard, Fred Kolling, Lananh Nguyen +4 more

Peripheral blood epigenetic immune-profiling and survival outcomes with anti-programmed death (PD)-1 based therapy in recurrent/metastatic (R/M) squamous cell carcinoma of head and neck (SCCHN).

Journal of Clinical Oncology(2023)10.1200/jco.2023.41.16_suppl.6062

N/A

0.104DataRank · unranked

1 citations

Ze Zhang, Keisuke Shirai, Rondi A. Butler, Min Kyung Lee, Annette M. Molinaro +7 more

The Overlooked Role of Specimen Preparation in Bolstering Deep Learning-Enhanced Spatial Transcriptomics Workflows

medRxiv(2023)10.1101/2023.10.09.23296700

N/A

0.104DataRank · unranked

1 citations

Yunrui Lu, Alos Diallo, Gokul Raghavendra Srinivasan, Zarif Azher, Brock C. Christensen +8 more

Lung-Kidney Axis in Cystic Fibrosis: Early Urinary Markers of Kidney Injury Correlate with Neutrophil Activation and Worse Lung Function

medRxiv(2023)10.1101/2023.11.10.23298378

N/A

0.104DataRank · unranked

1 citations

Himanshu Ballav Goswami, Katherine Sessions, Lindsay Mendyka, Brenna Kerin, Irma Vlasac +11 more

Examining Longitudinal Markers of Bladder Cancer Recurrence Through a Semi-Autonomous Machine Learning System for Quantifying Specimen Atypia from Urine Cytology

medRxiv(2023)10.1101/2023.03.02.23286716

N/A

0DataRank · unranked

1 citations

Natt Chan, Jonathan D. Marotti, Nathalie J. Rodrigues, Abdol Aziz Ould Ismail, Darcy A. Kerr +8 more

Data from MicroRNA Expression Ratio Is Predictive of Head and Neck Squamous Cell Carcinoma

(2023)10.1158/1078-0432.c.6517990

N/A

0DataRank · unranked

0 citations

Brock C. Christensen, KARL T. KELSEY, Carmen J. Marsit, Michele Avissar-Whiting

Data from Global Hypomethylation Identifies Loci Targeted for Hypermethylation in Head and Neck Cancer

(2023)10.1158/1078-0432.c.6518939

N/A

0DataRank · unranked

0 citations

E. Andrés Houseman, Brock C. Christensen, Rondi A. Butler, Michele Avissar-Whiting, Michael D. McClean +5 more

Data from Global Hypomethylation Identifies Loci Targeted for Hypermethylation in Head and Neck Cancer

(2023)10.1158/1078-0432.c.6518939.v1

N/A

0DataRank · unranked

0 citations

E. Andrés Houseman, Brock C. Christensen, Rondi A. Butler, Michele Avissar-Whiting, Michael D. McClean +5 more

Data from MicroRNA Expression Ratio Is Predictive of Head and Neck Squamous Cell Carcinoma

(2023)10.1158/1078-0432.c.6517990.v1

N/A

0DataRank · unranked

0 citations

Brock C. Christensen, KARL T. KELSEY, Carmen J. Marsit, Michele Avissar-Whiting

An Aurora kinase A-BOD1L1-PP2A B56 Axis promotes chromosome segregation fidelity

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.06.552174

N/A

0DataRank · unranked

0 citations

Irma Vlasac, Martin R. Higgs, Brock C. Christensen, Susanne Bechstedt, Duane A. Compton +1 more

Maternal–Infant Factors in Relation to Extracellular Vesicle and Particle miRNA in Prenatal Plasma and in Postpartum Human Milk

International Journal of Molecular Sciences(2024)10.3390/ijms25031538

N/A

0DataRank · unranked

8 citations

David A. Armstrong, Anne G. Hoen, Diane Gilbert‐Diamond, Jiang Gui, Thomas J. Palys +5 more

An initial game-theoretic assessment of enhanced tissue preparation and imaging protocols for improved deep learning inference of spatial transcriptomics from tissue morphology

Briefings in Bioinformatics(2024)10.1093/bib/bbae476

N/A

0DataRank · unranked

8 citations

Yunrui Lu, Alos Diallo, Gokul Raghavendra Srinivasan, Zarif Azher, Brock C. Christensen +8 more

Insights to aging prediction with AI based epigenetic clocks

Epigenomics(2024)10.1080/17501911.2024.2432854

N/A

0DataRank · unranked

7 citations

Alos Diallo, Marietta K. Saldias Montivero, Sameer Gabbita, Lucas A. Salas, Brock C. Christensen +1 more

Matched Analysis of Detailed Peripheral Blood and Tumor Immune Microenvironment Profiles in Bladder Cancer

Epigenomics(2024)10.2217/epi-2023-0358

N/A

0DataRank · unranked

5 citations

Lucas A. Salas, John K. Wiencke, Devin C. Koestler, Annette M. Molinaro, ANGELINE S. ANDREW +5 more

Associations in cell type-specific hydroxymethylation and transcriptional alterations of pediatric central nervous system tumors

Nature Communications(2024)10.1038/s41467-024-47943-9

N/A

0DataRank · unranked

2 citations

Nasim Azizgolshani, Ze Zhang, Laurent Perreard, Fred Kolling, Lananh Nguyen +4 more

CHARTING THE EVOLUTION AND TRANSFORMATIVE IMPACT OF THE PACIFIC SYMPOSIUM ON BIOCOMPUTING THROUGH A 30-YEAR RETROSPECTIVE ANALYSIS OF COLLABORATIVE NETWORKS AND THEMES USING MODERN COMPUTATIONAL TOOLS

PubMed(2024)10.1142/9789819807024_0002

N/A

0DataRank · unranked

1 citations

S.C. Garg, Edward Zhang, Sean McOsker, Carly A. Bobak, Kristine A. Giffin +3 more

An Aurora kinase A-BOD1L1-PP2A B56 axis promotes chromosome segregation fidelity

Cell Reports(2025)10.1016/j.celrep.2025.115317

N/A

0DataRank · unranked

7 citations

Irma Vlasac, Tatiana Lyalina, Martin R. Higgs, Brock C. Christensen, Susanne Bechstedt +2 more

Reply to: “Comments on the paper ‘Extensive epigenomic dysregulation is a hallmark of homologous recombination deficiency in triple‐negative breast cancer’ by Y. Chen et al.”

International Journal of Cancer(2025)10.1002/ijc.35434

N/A

0DataRank · unranked

0 citations

Lucas A. Salas, Jonathan D. Marotti, Nicole P. Jenkins, Chao Cheng, Todd W. Miller +3 more

Maternal diet quality in pregnancy and human milk extracellular vesicle and particle microRNA

Epigenetics Reports(2025)10.1080/28361512.2025.2508883

N/A

0DataRank · unranked

0 citations

Yuting Wang, Diane Gilbert-Diamond, David A. Armstrong, Anne G. Hoen, Megan E. Romano +7 more

Retrotransposon methylation profiles and survival in Black women with high-grade serous ovarian carcinoma

Clinical Epigenetics(2025)10.1186/s13148-025-01942-9

N/A

0DataRank · unranked

0 citations

Katherine A. Lawson-Michod, Courtney E. Johnson, Irma Vlasac, Sean Yoder, Tania Mesa +22 more

Normal gastric tissue Helicobacter pylori infection is associated with tissue cell composition, and cell type–specific epigenetic age acceleration, mitotic tick rate, and repetitive element methylation alterations

Epigenetics Reports(2025)10.1080/28361512.2025.2554836

N/A

0DataRank · unranked

0 citations

Brock C. Christensen, Lucas A. Salas, Irma Vlasac

A cytokine-based serum proteomic score is a prognostic biomarker for immunotherapy in head and neck cancer

Cancer Immunology Immunotherapy(2025)10.1007/s00262-025-04271-1

N/A

0DataRank · unranked

0 citations

Kartik Sehgal, Ze Zhang, Rondi A. Butler, John K. Wiencke, Annette M Molinaro +9 more

Lineage plasticity enables low-ER luminal tumors to evolve and gain basal-like traits

Breast Cancer Research(2023)10.1186/s13058-023-01621-8

N/A

0DataRank · unranked

31 citations

Sundis Mahmood, Nevena B. Ognjenovic, Min Kyung Lee, Owen M. Wilkins, Brock C. Christensen +3 more

Widespread redundancy in -omics profiles of cancer mutation states

Zenodo (CERN European Organization for Nuclear Research)(2022)10.5281/zenodo.6638832

Top 100%

0DataRank

Top 100%0 citations

Brock C. Christensen, Maria Chikina, Casey S. Greene, J. P. Wickersham Crawford

Silencing hepatic MCJ attenuates non-alcoholic fatty liver disease (NAFLD) by increasing mitochondrial fatty acid oxidation

Nature Communications(2020)10.1038/s41467-020-16991-2

N/A

0DataRank · unranked

146 citations

Karen A. Fortner, Paula Iruzubieta, Teresa C. Delgado, Emily Giddings, Youdinghuan Chen +21 more

A large-scale internal validation study of unsupervised virtual trichrome staining technologies on nonalcoholic steatohepatitis liver biopsies

Modern Pathology(2020)10.1038/s41379-020-00718-1

N/A

0DataRank · unranked

52 citations

Nasim Azizgolshani, Michael J. Andersen, Arief A. Suriawinata, Xiaoying Liu, Mikhail Lisovsky +5 more

Hypermethylation and global remodelling of DNA methylation is associated with acquired cisplatin resistance in testicular germ cell tumours

Epigenetics(2020)10.1080/15592294.2020.1834926

N/A

0DataRank · unranked

44 citations

Ratnakar Singh, Fang Fang, Emmanuel Bikorimana, Hannah Baldwin, Andrea Corbet +10 more

Extracellular Vesicles from Pseudomonas aeruginosa Suppress MHC-Related Molecules in Human Lung Macrophages

ImmunoHorizons(2020)10.4049/immunohorizons.2000026

N/A

0DataRank · unranked

36 citations

Min Kyung Lee, Haley F. Hazlett, John A. Dessaint, Diane Mellinger, Daniel Aridgides +5 more

Limiting Self-Renewal of the Basal Compartment by PKA Activation Induces Differentiation and Alters the Evolution of Mammary Tumors

Developmental Cell(2020)10.1016/j.devcel.2020.10.004

N/A

0DataRank · unranked

27 citations

Meisam Bagheri, Gadisti A. Mohamed, Ke Xu, Youdinghuan Chen, Mohamed Ashick Mohamed Saleem +7 more

IFAA: Robust Association Identification and Inference for Absolute Abundance in Microbiome Analyses

Journal of the American Statistical Association(2020)10.1080/01621459.2020.1860770

N/A

0DataRank · unranked

5 citations

Lü Tian, A. James O’Malley, MARGARET R. KARAGAS, Anne G. Hoen, Brock C. Christensen +6 more

PathFlow-MixMatch for Whole Slide Image Registration: An Investigation of a Segment-Based Scalable Image Registration Method

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.22.002402

N/A

0DataRank · unranked

9 citations

Christopher R. Jackson, Christian C. Haudenschild, Brock C. Christensen, Louis Vaickus, Joshua Levy

A Large-Scale Internal Validation Study of Unsupervised Virtual Trichrome Staining Technologies on Non-alcoholic Steatohepatitis Liver Biopsies

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.07.03.187237

N/A

0DataRank · unranked

4 citations

Nasim Azizgolshani, Michael J. Andersen, Arief A. Suriawinata, Xiaoying Liu, Mikhail Lisovsky +5 more

MethylSPWNet and MethylCapsNet: Biologically Motivated Organization of DNAm Neural Network, Inspired by Capsule Networks

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.14.251306

N/A

0DataRank · unranked

2 citations

Youdinghuan Chen, Nasim Azizgolshani, Curtis L. Petersen, Alexander J. Titus, Erika L. Moen +4 more

Limiting Self-Renewal of the Basal Compartment Induces Differentiation and Alters Evolution of Mammary Tumors

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.18.907741

N/A

0DataRank · unranked

1 citations

Meisam Bagheri, Gadisti A. Mohamed, Ke Xu, Meredith S. Brown, Youdinghuan Chen +6 more

DNA hypohydroxymethylation in pediatric central nervous system tumors is associated with CTCF binding sites and reduced survival

medRxiv(2020)10.1101/2020.06.20.20136184

N/A

0DataRank · unranked

1 citations

Curtis L. Petersen, Youdinghuan Chen, Lucas A. Salas, Laurent Perreard, Lananh Nguyen +2 more

Using Satellite Images and Deep Learning to Identify Associations Between County-Level Mortality and Residential Neighborhood Features Proximal to Schools: A Cross-Sectional Study

medRxiv(2020)10.1101/2020.10.12.20211755

N/A

0DataRank · unranked

1 citations

Rebecca M. Lebeaux, Anne G. Hoen, Brock C. Christensen, Louis Vaickus, Todd A. MacKenzie +1 more

MethylSPWNet and MethylCapsNet: Biologically Motivated Organization of DNAm Neural Networks, Inspired by Capsule Networks

npj Systems Biology and Applications(2021)10.1038/s41540-021-00193-7

N/A

0DataRank · unranked

25 citations

Youdinghuan Chen, Nasim Azizgolshani, Curtis L. Petersen, Alexander J. Titus, Erika L. Moen +4 more

DNA 5-hydroxymethylcytosine in pediatric central nervous system tumors may impact tumor classification and is a positive prognostic marker

Clinical Epigenetics(2021)10.1186/s13148-021-01156-9

N/A

0DataRank · unranked

20 citations

Curtis L. Petersen, Youdinghuan Chen, Joshua Levy, Lucas A. Salas, Laurent Perreard +3 more

Cytomegalovirus infection in malignant pleural mesothelioma

PLoS ONE(2021)10.1371/journal.pone.0254136

N/A

0DataRank · unranked

8 citations

KARL T. KELSEY, Ryan T. Demmer, Manish R. Patel, Raphael Bueno, Brock C. Christensen +4 more

Bridge Category Models: Development of Bayesian Modelling Procedures to Account for Bridge Ordinal Ratings for Disease Staging

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.08.17.456726

N/A

0DataRank · unranked

3 citations

Carly A. Bobak, Nasim Azizgolshani, Michael J. Andersen, Arief A. Suriawinata, Xiaoying Liu +6 more

Distinct Cytosine Modification Profiles Define Epithelial-to-Mesenchymal Cell-State Transitions

Research Square(2021)10.21203/rs.3.rs-823460/v1

N/A

0DataRank · unranked

0 citations

Meredith S. Brown, Owen M. Wilkins, Diwakar R. Pattabiraman, Brock C. Christensen, Min Kyung Lee

Concentrations of Per- and Polyfluoroalkyl Substances in Paired Maternal Plasma and Human Milk in the New Hampshire Birth Cohort

Environmental Science & Technology(2022)10.1021/acs.est.2c05555

N/A

0DataRank · unranked

45 citations

Yuting Wang, Brock C. Christensen, Julianne Cook Botelho, Antonia M. Calafat, Lisa A. Peterson +4 more

HiTIMED: hierarchical tumor immune microenvironment epigenetic deconvolution for accurate cell type resolution in the tumor microenvironment using tumor-type-specific DNA methylation data

Journal of Translational Medicine(2022)10.1186/s12967-022-03736-6

N/A

0DataRank · unranked

43 citations

John K. Wiencke, KARL T. KELSEY, Devin C. Koestler, Brock C. Christensen, Lucas A. Salas +1 more

Immune profiles and DNA methylation alterations related with non-muscle-invasive bladder cancer outcomes

Clinical Epigenetics(2022)10.1186/s13148-022-01234-6

N/A

0DataRank · unranked

26 citations

Lucas A. Salas, John K. Wiencke, Devin C. Koestler, Annette M. Molinaro, ANGELINE S. ANDREW +5 more

Early-life exposure to per- and polyfluoroalkyl substances and infant gut microbial composition

Environmental Epidemiology(2022)10.1097/ee9.0000000000000238

N/A

0DataRank · unranked

19 citations

Yuka Moroishi, Thomas J. Palys, Brock C. Christensen, Rachel Criswell, Lisa A. Peterson +6 more

Prioritizing Measures That Matter Within a Person-Centered Oncology Learning Health System

JNCI Cancer Spectrum(2022)10.1093/jncics/pkac037

N/A

0DataRank · unranked

6 citations

Alice Kennedy, Kathryn B Kirkland, Konstantin H. Dragnev, Steven D. Leach, Madge E. Buus‐Frank +81 more

Distinct Cytosine Modification Profiles Define Epithelial-to-MesenChymal Cell-State Transitions

Epigenomics(2022)10.2217/epi-2022-0023

N/A

0DataRank · unranked

7 citations

Meredith S. Brown, Owen M. Wilkins, Diwakar R. Pattabiraman, Brock C. Christensen, Min Kyung Lee

Development of biologically interpretable multimodal deep learning model for cancer prognosis prediction

Proceedings of the 37th ACM/SIGAPP Symposium on Applied Computing(2022)10.1145/3477314.3507032

N/A

0DataRank · unranked

16 citations

Louis Vaickus, Lucas A. Salas, Brock C. Christensen, Joshua Levy, Zarif Azher

ArcticAI: A Deep Learning Platform for Rapid and Accurate Histological Assessment of Intraoperative Tumor Margins

medRxiv(2022)10.1101/2022.05.06.22274781

N/A

0DataRank · unranked

8 citations

Matthew Davis, Rachael Chacko, Michael J. Davis, Lucy Fu, Tarushii Goel +8 more

Assessment of Emerging Pretraining Strategies in Interpretable Multimodal Deep Learning for Cancer Prognostication

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.21.517440

N/A

0DataRank · unranked

2 citations

Anish Suvarna, Ji‐Qing Chen, Ze Zhang, Brock C. Christensen, Lucas A. Salas +3 more

Identification of Spatial Proteomic Signatures of Colon Tumor Metastasis: A Digital Spatial Profiling Approach

medRxiv(2022)10.1101/2022.12.04.22283073

N/A

0DataRank · unranked

2 citations

John P. Zavras, Eren M. Veziroglu, Mustafa Nasir-Moin, Fred Kolling, Brock C. Christensen +10 more

Federated Learning for Multicenter Collaborations of Small Biomedical Research Institutions: A Framework for Navigating Challenges and Realizing Opportunities

Zenodo (CERN European Organization for Nuclear Research)(2022)10.5281/zenodo.7368975

N/A

0DataRank · unranked

0 citations

Jeffrey Thompson, Brady Hunt, Arnold Song, Brock C. Christensen, Jason H. Moore +3 more

Inferring Spatially Resolved Transcriptomics Data from Whole Slide Images for the Assessment of Colorectal Tumor Metastasis: A Feasibility Study

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.11.24.517856

N/A

0DataRank · unranked

0 citations

Eric Feng, Cyril Sharma, Zarif Azher, Tarushii Goel, Ojas A. Ramwala +10 more

Additional file 2 of Widespread redundancy in -omics profiles of cancer mutation states

Open MIND(2022)10.6084/m9.figshare.20167988

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0DataRank

Top 100%0 citations

Brock C. Christensen, Maria Chikina, Casey S. Greene, Jake Crawford

Inferring spatial transcriptomics markers from whole slide images to characterize metastasis-related spatial heterogeneity of colorectal tumors: A pilot study

Journal of Pathology Informatics(2023)10.1016/j.jpi.2023.100308

N/A

0DataRank · unranked

23 citations

Eric Feng, Cyril Sharma, Zarif Azher, Tarushii Goel, Ojas A. Ramwala +10 more

Identification of Spatial Proteomic Signatures of Colon Tumor Metastasis

American Journal Of Pathology(2023)10.1016/j.ajpath.2023.02.020

N/A

0DataRank · unranked

21 citations

John P. Zavras, Eren M. Veziroglu, Mustafa Nasir-Moin, Fred Kolling, Brock C. Christensen +10 more

Assessment of emerging pretraining strategies in interpretable multimodal deep learning for cancer prognostication

BioData Mining(2023)10.1186/s13040-023-00338-w

N/A

0DataRank · unranked

19 citations

Anish Suvarna, Jiqing Chen, Ze Zhang, Brock C. Christensen, Lucas A. Salas +3 more

Application of Novel Breast Biospecimen Cell-Type Adjustment Identifies Shared DNA Methylation Alterations in Breast Tissue and Milk with Breast Cancer–Risk Factors

Cancer Epidemiology Biomarkers & Prevention(2023)10.1158/1055-9965.epi-22-0405

N/A

0DataRank · unranked

14 citations

Connolly D. Carroll, Lucas A. Salas, MARGARET R. KARAGAS, Brock C. Christensen, Meghan E. Muse

Examining longitudinal markers of bladder cancer recurrence through a semiautonomous machine learning system for quantifying specimen atypia from urine cytology

Cancer Cytopathology(2023)10.1002/cncy.22725

N/A

0DataRank · unranked

14 citations

Natt Chan, Jonathan D. Marotti, Nathalie J. Rodrigues, Abdol Aziz Ould Ismail, Darcy A. Kerr +8 more

The Effect of Lung Resection for NSCLC on Circulating Immune Cells: A Pilot Study

Current Oncology(2023)10.3390/curroncol30050387

N/A

0DataRank · unranked

5 citations

Kayla A. Fay, Alan Bergeron, Peisheng Zhang, Daniel W. Mielcarz, Andrew Calkins +6 more

Distinct HOX Gene Family DNA Methylation Profiles in Histologically Normal Skin Dependent on Dermoscopic Pattern of Adjacent Nevi

Journal of Investigative Dermatology(2023)10.1016/j.jid.2023.03.1653

N/A

0DataRank · unranked

2 citations

Helmut Schaider, Harald Oey, H. Peter Soyer, Brock C. Christensen, Mitchell Stark +1 more

A deep learning algorithm to detect cutaneous squamous cell carcinoma on frozen sections in Mohs micrographic surgery: a retrospective assessment

medRxiv(2023)10.1101/2023.05.14.23289960

N/A

0DataRank · unranked

5 citations

Gokul Raghavendra Srinivasan, Rachael Chacko, Sophie Chen, Anish Suvarna, Louis Vaickus +9 more

Feasibility of Inferring Spatial Transcriptomics from Single-Cell Histological Patterns for Studying Colon Cancer Tumor Heterogeneity

medRxiv(2023)10.1101/2023.10.09.23296701

N/A

0DataRank · unranked

4 citations

Yunrui Lu, Cyril Sharma, Eric Feng, Zarif Azher, Alos Diallo +12 more

Alteration of DNMT1/DNMT3A by eribulin elicits global DNA methylation changes with potential therapeutic implications for triple-negative breast cancer

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.09.544426

N/A

0DataRank · unranked

2 citations

Min Kyung Lee, Kristen E. Muller, Todd W. Miller, Diwakar R. Pattabiraman, Brock C. Christensen +1 more

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