Yogesh Goyal

Also affiliated with The University of Texas MD Anderson Cancer Center, International Institute of Information Technology Bangalore, Northwestern University, Simons Foundation, Chan Zuckerberg Initiative (United States), Northwestern Medicine, University of Pennsylvania

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 28 papers. Top paper: “Diverse clonal fates emerge upon drug treatment of homogeneous cancer cells”.

Diverse clonal fates emerge upon drug treatment of homogeneous cancer cells

Nature(2023)10.1038/s41586-023-06342-8

N/A

0.782DataRank · unranked

183 citations

Gianna T. Busch, Maalavika Pillai, Jingxin Li, Ryan H. Boe, Emanuelle I. Grody +30 more

Changes in chromatin accessibility are not concordant with transcriptional changes for single‐factor perturbations

Molecular Systems Biology(2022)10.15252/msb.202210979

N/A

0.673DataRank · unranked

88 citations

Eric M. Sanford, Yogesh Goyal, Arjun Raj, Karun Kiani

TGF-β blockade drives a transitional effector phenotype in T cells reversing SIV latency and decreasing SIV reservoirs in vivo

Nature Communications(2024)10.1038/s41467-024-45555-x

N/A

0.527DataRank · unranked

15 citations

Deepanwita Bose, Mariluz Araínga, Muhammad R. Haque, Christine M. Fennessey, Rachel A Caddell +14 more

Fluctuation structure predicts genome-wide perturbation outcomes

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.27.661814

N/A

0.104DataRank · unranked

1 citations

Leon Schwartz, Hanxiao Sun, Madeline E. Melzer, Nitu Kumari, Benjamin Haley +4 more

Integrating synthetic biology to understand and engineer the heart, lung, blood, and sleep systems

Cell Systems(2025)10.1016/j.cels.2025.101446

N/A

0.104DataRank · unranked

1 citations

Jichao Chen, Martha U. Gillette, Laurie A. Boyer, Tara L. Deans, Pulin Li +19 more

Cell type determination for cardiac differentiation occurs soon after seeding of human-induced pluripotent stem cells

Genome biology(2022)10.1186/s13059-022-02654-6

N/A

0DataRank · unranked

25 citations

Yogesh Goyal, Naveen Jain, Qiaohong Wang, Rachel Truitt, Allison Coté +7 more

Changes in chromatin accessibility are not concordant with transcriptional changes for single-factor perturbations

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.03.478981

N/A

0DataRank · unranked

9 citations

Eric M. Sanford, Yogesh Goyal, Arjun Raj, Karun Kiani

ClonoCluster: a method for using clonal origin to inform transcriptome clustering

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.02.11.480077

N/A

0DataRank · unranked

4 citations

Yogesh Goyal, Connie Jiang, Arjun Raj, Lee P. Richman

fMetastatic potential in clonal melanoma cells is driven by a rare, early-invading subpopulation

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.17.488591

N/A

0DataRank · unranked

4 citations

Luciann Cuenca, Karun Kiani, Gianna T. Busch, Dylan Fingerman, Margaret C. Dunagin +9 more

ClonoCluster: A method for using clonal origin to inform transcriptome clustering

Cell Genomics(2023)10.1016/j.xgen.2022.100247

N/A

0DataRank · unranked

23 citations

Yogesh Goyal, Connie Jiang, Arjun Raj, Lee P. Richman

Toward a systems-level probing of tumor clonality

iScience(2023)10.1016/j.isci.2023.106574

N/A

0DataRank · unranked

6 citations

Ajay Abraham, Vipul Shukla, Yogesh Goyal, Emanuelle I. Grody

Retrospective identification of intrinsic factors that mark pluripotency potential in rare somatic cells

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.02.10.527870

N/A

0DataRank · unranked

7 citations

Yogesh Goyal, Margaret C. Dunagin, Christopher Coté, Ian A. Mellis, Benjamin Emert +5 more

Gene Networks with Transcriptional Bursting Recapitulate Rare Transient Coordinated High Expression States in Cancer

Cell Systems(2020)10.1016/j.cels.2020.03.004

N/A

0DataRank · unranked

101 citations

Michael Saint-Antoine, Eric M. Sanford, Benjamin Emert, Abhyudai Singh, Carsten Marr +3 more

TGF-β blockade drives a transitional effector phenotype in T cells reversing SIV latency and decreasing SIV reservoirs in vivo

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.09.05.556422

N/A

0DataRank · unranked

1 citations

Deepanwita Bose, Mariluz Araínga, Muhammad R. Haque, Christine M. Fennessey, Rachel A Caddell +14 more

Retrospective identification of cell-intrinsic factors that mark pluripotency potential in rare somatic cells

Cell Systems(2024)10.1016/j.cels.2024.01.001

N/A

0DataRank · unranked

29 citations

Yogesh Goyal, Margaret C. Dunagin, Christopher Coté, Ian A. Mellis, Benjamin Emert +7 more

AP-1 Mediates Cellular Adaptation and Memory Formation During Therapy Resistance

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.07.25.604999

N/A

0DataRank · unranked

14 citations

Pavithran T. Ravindran, Aoife O’Farrell, Gianna T. Busch, Ryan H. Boe, Zijian Niu +8 more

Piscis: a novel loss estimator of the F1 score enables accurate spot detection in fluorescence microscopy images via deep learning

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.01.31.578123

N/A

0DataRank · unranked

8 citations

Aoife O’Farrell, Jingxin Li, Sam Reffsin, Naveen Jain, Ian Dardani +3 more

Dysregulated RNA splicing impairs regeneration in alcohol-associated liver disease

Nature Communications(2025)10.1038/s41467-025-63251-2

N/A

0DataRank · unranked

5 citations

Sushant Bangru, Rajesh Kumar Dutta, Diptatanu Das, Brandon Peiffer, Subhashis Natua +9 more

Piscis: A loss estimator of the F1 score enables accurate spot detection in fluorescence microscopy images via deep learning

Cell Systems(2025)10.1016/j.cels.2025.101448

N/A

0DataRank · unranked

4 citations

Aoife O'Farrell, Jingxin Li, Sam Reffsin, Naveen Jain, Ian Dardani +3 more

Resolving the design principles that control post-natal vascular growth and scaling

Cell Systems(2025)10.1016/j.cels.2025.101324

N/A

0DataRank · unranked

2 citations

Jonas Braun, Sayantan Dutta, Debabrata Patra, Pauline Bougaran, Ana Mompeón +13 more

Failed Metabolic Adaptation to Stress Underlies Pathogenesis in a Heterozygous Genetic Disorder

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.04.13.648535

N/A

0DataRank · unranked

1 citations

Erin McCarthy, Annette Krol, Jonas Braun, Aashutosh Shetti, Lisa M. Godsel +12 more

Fluctuation structure predicts genome-wide perturbation outcomes

Research Square(2025)10.21203/rs.3.rs-7304871/v1

N/A

0DataRank · unranked

0 citations

Benjamin Kuznets-Speck, Leon Schwartz, Hanxiao Sun, Madeline E. Melzer, Nitu Kumari +4 more

Keeping SCORE enables interpretable uncertainty-aware classification from diffusion models for genomics

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.11.26.690838

N/A

0DataRank · unranked

0 citations

Jae-Kwon Jung, Pornchanan Pholraksa, Adrianne Zhong, Leon Schwartz, Ekta Prashnani +3 more

Prevalence of and gene regulatory constraints on transcriptional adaptation in single cells

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.14.553318

N/A

0DataRank · unranked

1 citations

Nicholas Bodkin, Madeline E. Melzer, Yogesh Goyal, Ian A. Mellis

Responsiveness to perturbations is a hallmark of transcription factors that maintain cell identity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.11.147207

N/A

0DataRank · unranked

2 citations

Hailey I. Edelstein, Rachel Truitt, Lauren E. Beck, Orsolya Symmons, Yogesh Goyal +7 more

Responsiveness to perturbations is a hallmark of transcription factors that maintain cell identity in vitro

Cell Systems(2021)10.1016/j.cels.2021.07.003

N/A

0DataRank · unranked

23 citations

Hailey I. Edelstein, Rachel Truitt, Yogesh Goyal, Lauren E. Beck, Orsolya Symmons +9 more

Molecular mechanisms underlying cellular effects of human MEK1 mutations

Molecular Biology of the Cell(2021)10.1091/mbc.e20-10-0625

N/A

0DataRank · unranked

11 citations

Liu Yang, Yogesh Goyal, Granton A. Jindal, Joshua L. Wetzel, Mona Singh +3 more

ClampFISH 2.0 enables rapid, scalable amplified RNA detection in situ

Nature Methods(2022)10.1038/s41592-022-01653-6

N/A

0DataRank · unranked

47 citations

Benjamin Emert, Yogesh Goyal, Connie Jiang, Amanpreet Kaur, Jasmine Lee +8 more