🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Bogdan Budnik

Harvard University

ORCID: 0000-0003-3622-2003

Also affiliated with Harvard University Press, Inspire Institute

ChemistryBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile
1.2Author DataRank

Indexed papers

2in pilot corpus
datarank_citation_only_1hop_v6· scope data_onlyMethodology
Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

Top data-sharing exemplar

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Integration of a multi-omics stem cell differentiation dataset using a dynamical model

PLoS Genetics(2023)10.1371/journal.pgen.1010744
Top 33%
0.600DataRank
Top 33%15 citations

Noémie M. L. P. Bérenger-Currias, Bogdan Budnik, Nikolai Slavov, Stefan Semrau, Patrick R. van den Berg

Papers

Driven by 23 papers — median percentile 67. Top paper: “Discovery of Human sORF-Encoded Polypeptides (SEPs) in Cell Lines and Tissue”.

Discovery of Human sORF-Encoded Polypeptides (SEPs) in Cell Lines and Tissue

Journal of Proteome Research(2014)10.1021/pr401280w
N/A
0.795DataRank · unranked
199 citations

Carl C. Ward, Irwin Jungreis, Sarah A. Slavoff, Adam G. Schwaid, John Neveu +6 more

Integration of a multi-omics stem cell differentiation dataset using a dynamical model

PLoS Genetics(2023)10.1371/journal.pgen.1010744
Top 33%
0.600DataRank
Top 33%15 citations

Noémie M. L. P. Bérenger-Currias, Bogdan Budnik, Nikolai Slavov, Stefan Semrau, Patrick R. van den Berg

The 2024 Report on the Human Proteome from the HUPO Human Proteome Project

Journal of Proteome Research(2024)10.1021/acs.jproteome.4c00776
Top 34%
0.585DataRank
Top 34%26 citations

Sandra Orchard, Lydie Lane, Cecilia Lindskog, Charles Pineau, Christopher M. Overall +15 more

Identification of markers for the isolation of neuron-specific extracellular vesicles

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.03.587267
N/A
0.495DataRank · unranked
14 citations

Sara Whiteman, Tal Gilboa, Wendy Trieu, Siddharth Iyer, Bogdan Budnik +11 more

Biliary excretion of excess iron in mice requires hepatocyte iron import by Slc39a14

Journal of Biological Chemistry(2021)10.1016/j.jbc.2021.100835
N/A
0DataRank · unranked
28 citations

Heather L. Conboy, Shintaro Hojyo, Toshiyuki Fukada, Bogdan Budnik, Thomas B. Bartnikas +1 more

Loss of TBK1 activity leads to TDP-43 proteinopathy through lysosomal dysfunction in human motor neurons

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.11.464011
N/A
0DataRank · unranked
19 citations

Michael F. Wells, Gengle Niu, Irune Guerra San Juan, Francesco Limone, Atsushi Fukuda +8 more

Quality assurance of hematopoietic stem cells by macrophages determines stem cell clonality

Science(2022)10.1126/science.abo4837
N/A
0DataRank · unranked
81 citations

Mackenzie L. Smith, Cecília Pessoa Rodrigues, Elliott J. Hagedorn, Ji Wook Kim, Bogdan Budnik +2 more

A Proximity biotinylation assay with a host protein bait reveals multiple factors modulating enterovirus replication

PLoS Pathogens(2022)10.1371/journal.ppat.1010906
N/A
0DataRank · unranked
10 citations

Ekaterina G. Viktorova, Samuel Gabaglio, Anna Zimina, Bogdan Budnik, Bridge G. Wynn +3 more

Quality assurance of hematopoietic stem cells by macrophages determines stem cell clonality

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.07.483327
N/A
0DataRank · unranked
5 citations

Mackenzie L. Smith, Cecília Pessoa Rodrigues, Elliott J. Hagedorn, Bogdan Budnik, Leonard I. Zon +1 more

A Proximity Biotinylation Assay with a Host Protein Bait Reveals Multiple Factors Modulating Enterovirus Replication

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.24.493328
N/A
0DataRank · unranked
1 citations

Ekaterina G. Viktorova, Samuel Gabaglio, Anna Zimina, Bogdan Budnik, Bridge Wynn +3 more

Systematic conformation-to-phenotype mapping via limited deep-sequencing of proteins

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.04.12.488104
N/A
0DataRank · unranked
0 citations

Victor Y. Zhao, Kibum Park, Amir Bitran, Sunia A. Trauger, Bogdan Budnik +2 more

Systematic Conformation‐to‐Phenotype Mapping via Limited Protein Sequencing

The FASEB Journal(2022)10.1096/fasebj.2022.36.s1.l7930
N/A
0DataRank · unranked
0 citations

Sunia A. Trauger, Bogdan Budnik, Eugene I. Shakhnovich, Eugene Serebryany

Systematic Conformation-to-Phenotype Mapping via Limited Deep-Sequencing of Proteins

SSRN Electronic Journal(2022)10.2139/ssrn.4087714
N/A
0DataRank · unranked
0 citations

Victor Y. Zhao, Kibum Park, Amir Bitran, Sunia A. Trauger, Bogdan Budnik +2 more

A swapped genetic code prevents viral infections and gene transfer

Nature(2023)10.1038/s41586-023-05824-z
N/A
0DataRank · unranked
96 citations

Svenja Vinke, Regan Flynn, Siân V. Owen, Eleanor A. Rand, Bogdan Budnik +11 more

Systematic conformation-to-phenotype mapping via limited deep sequencing of proteins

Molecular Cell(2023)10.1016/j.molcel.2023.05.006
N/A
0DataRank · unranked
9 citations

Victor Y. Zhao, Kibum Park, Amir Bitran, Sunia A. Trauger, Bogdan Budnik +2 more

Synthetic genomes unveil the effects of synonymous recoding

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.06.16.599206
N/A
0DataRank · unranked
20 citations

Anush Chiappino-Pepe, Bogdan Budnik, Maximilien Baas-Thomas, Regan Flynn, Shirui Yan +25 more

Symmetry in levels of axon-axon homophilic adhesion establishes topography in the corpus callosum and development of connectivity between brain hemispheres

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.03.28.587108
N/A
0DataRank · unranked
12 citations

Patrick Davis, Cheryl Brandenburg, Yasuhiro Itoh, María J. Galazo, Luciano C. Greig +4 more

Cortical projection neurons with distinct axonal connectivity employ ribosomal complexes with distinct protein compositions

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.12.22.629968
N/A
0DataRank · unranked
1 citations

Bogdan Budnik, John E. Froberg, Jeffrey D. Macklis, Phuoc Tien Tran

C9ORF72 poly-PR disrupts expression of ALS/FTD-implicated STMN2 through SRSF7

Acta Neuropathologica Communications(2025)10.1186/s40478-025-01977-2
N/A
0DataRank · unranked
4 citations

Julie Smeyers, Kevin Eggan, Bogdan Budnik, Daniel A. Mordes, Karen S. Wang

Mass Spectrometry‐Based Proteomics Analysis of Nasal Fluid Uncovers Differentially Expressed Proteins as Potential Biomarkers of Allergic Asthma

Clinical & Experimental Allergy(2025)10.1111/cea.70140
N/A
0DataRank · unranked
0 citations

Shad Morton, Alyson Brown, Bogdan Budnik, Ayobami Akenroye, Rushdy Ahmad +2 more

Endothelial extracellular vesicles contain protective proteins and rescue ischemia-reperfusion injury in a human heart-on-chip

Science Translational Medicine(2020)10.1126/scitranslmed.aax8005
N/A
0DataRank · unranked
131 citations

Johan Lind, Herdeline Ann M. Ardoña, Sean P. Sheehy, Lauren Dickinson, Feyisayo Eweje +8 more

Daily Cycles of Reversible Protein Condensation in Cyanobacteria

Cell Reports(2020)10.1016/j.celrep.2020.108032
N/A
0DataRank · unranked
39 citations

Yi Liao, Edward W. J. Wallace, Bogdan Budnik, D. Allan Drummond, Michael J. Rust +1 more

The Role of Small Extracellular Vesicles in Viral-Protozoan Symbiosis: Lessons From Trichomonasvirus in an Isogenic Host Parasite Model

Frontiers in Cellular and Infection Microbiology(2020)10.3389/fcimb.2020.591172
N/A
0DataRank · unranked
26 citations

Tiffany Chan, Hidemi S. Yamamoto, Bogdan Budnik, Raina N. Fichorova, Yashini Govender