🏆 Finalist — NIH Data Sharing Index (“S-Index”) Challenge

Stephanea Sotcheff

The University of Texas Medical Branch at Galveston

ORCID: 0000-0003-3681-3639

MedicineEnvironmental ScienceAgricultural and Biological SciencesBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 11 papers. Top paper: “Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants”.

Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants

eLife(2021)10.7554/elife.68479

N/A

0.806DataRank · unranked

35 citations

Rose M. Langsjoen, Brooke Mitchell, Barbara M. Judy, Patrick C. Newman, Jessica A. Plante +19 more

ViReMa : a virus recombination mapper of next-generation sequencing data characterizes diverse recombinant viral nucleic acids

GigaScience(2023)10.1093/gigascience/giad009

N/A

0.524DataRank · unranked

32 citations

Yiyang Zhou, Jason Yeung, Yan Sun, John E. Johnson, Bruce E. Torbett +2 more

ViReMa: A Virus Recombination Mapper of Next-Generation Sequencing data characterizes diverse recombinant viral nucleic acids

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.03.12.484090

N/A

0.269DataRank · unranked

5 citations

Yiyang Zhou, Yan Sun, John E. Johnson, Bruce E. Torbett, Andrew Routh +1 more

Co-variation of viral recombination with single nucleotide variants during virus evolution revealed by CoVaMa

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.14.460373

N/A

0.165DataRank · unranked

2 citations

Stephanea Sotcheff, Christian M. Gallardo, Elizabeth Jaworski, Bruce E. Torbett, Andrew Routh +1 more

Next-generation sequencing: A new avenue to understand viral RNA–protein interactions

Journal of Biological Chemistry(2022)10.1016/j.jbc.2022.101924

N/A

0DataRank · unranked

12 citations

Stephanea Sotcheff, Andrew Routh, Yiyang Zhou

SARS-CoV-2 Uses Nonstructural Protein 16 to Evade Restriction by IFIT1 and IFIT3

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.26.509529

N/A

0DataRank · unranked

9 citations

Kumari G. Lokugamage, Michelle N. Vu, Bryan A. Johnson, Dionna Scharton, Jessica A. Plante +13 more

Investigation of a SARS-CoV-2 outbreak in a Texas summer camp resulting from a single introduction

medRxiv(2022)10.1101/2022.05.29.22275277

N/A

0DataRank · unranked

0 citations

R. Elias Alvarado, Stephanea Sotcheff, Brooke Mitchell, Allan McConnell, Rafael Rahal Guaragna Machado +9 more

SARS-CoV-2 Uses Nonstructural Protein 16 To Evade Restriction by IFIT1 and IFIT3

Journal of Virology(2023)10.1128/jvi.01532-22

N/A

0DataRank · unranked

46 citations

Kumari G. Lokugamage, Michelle N. Vu, Bryan A. Johnson, Dionna Scharton, Jessica A. Plante +13 more

QTQTN motif upstream of the furin-cleavage site plays key role in SARS-CoV-2 infection and pathogenesis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.15.472450

N/A

0DataRank · unranked

9 citations

Kumari G. Lokugamage, Jessica A. Plante, Dionna Scharton, Bryan A. Johnson, Stephanea Sotcheff +11 more

Covariation of viral recombination with single nucleotide variants during virus evolution revealed by CoVaMa

Nucleic Acids Research(2021)10.1093/nar/gkab1259

N/A

0DataRank · unranked

9 citations

Stephanea Sotcheff, Christian M. Gallardo, Elizabeth Jaworski, Bruce E. Torbett, Andrew Routh +1 more

Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.03.10.434828

N/A

0DataRank · unranked

8 citations

Rose M. Langsjoen, Brooke Mitchell, Barbara M. Judy, Patrick C. Newman, Jessica A. Plante +19 more