Ross C. Hardison

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

106Author DataRank

Indexed papers

15in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 15 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Nature(2007)10.1038/nature05874

Top 1%

12.9DataRank

Top 1%5277 citations

J Stamatoyannopoulos, Simon G. Gregory, T Gingeras, Eoghan Harrington, Zhiping Weng +286 more

Papers

Driven by 54 papers — median percentile 98. Top paper: “Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project”.

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

Nature(2007)10.1038/nature05874

Top 1%

12.9DataRank

Top 1%5277 citations

J Stamatoyannopoulos, Simon G. Gregory, T Gingeras, Eoghan Harrington, Zhiping Weng +286 more

Initial sequencing and comparative analysis of the mouse genome

Nature(2002)10.1038/nature01262

Top 1%

12.6DataRank

Top 1%7282 citations

Robert H. Waterston, Kerstin Lindblad‐Toh, Julien Lagarde, Josep F. Abril, PANKAJ AGARWAL +189 more

Comprehensive genomic characterization of squamous cell lung cancers

Nature(2012)10.1038/nature11404

Top 1%

11.0DataRank

Top 1%4036 citations

Gad Getz, Stephen E. Schumacher, Petar Stojanov, Chang‐Jiun Wu, Hailei Zhang +326 more

Genetic effects on gene expression across human tissues

Nature(2017)10.1038/nature24277

Top 1%

10.1DataRank

Top 1%4706 citations

Barbara E. Engelhardt, Stephen B. Montgomery, Sara Mostafavi, Ayellet V. Segrè, Hailei Zhang +227 more

A map of human genome variation from population-scale sequencing

Nature(2010)10.1038/nature09534

Top 2%

9.1DataRank

Top 2%8109 citations

Min Hu, Yuan Chen, Matthew N. Bainbridge, Richard M. Durbin, Si Quang Le +319 more

Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel

Nature Communications(2014)10.1038/ncomms4934

Top 2%

8.3DataRank

Top 2%460 citations

Jonathan Marchini, Peter Donnelly, Gerton Lunter, Jonathan L. Marchini, Simon Myers +364 more

Integrative annotation of chromatin elements from ENCODE data

Nucleic Acids Research(2012)10.1093/nar/gks1284

Top 2%

7.9DataRank

Top 2%628 citations

Jason Ernst, Steven P. Wilder, Anshul Kundaje, Robert S. Harris, Max Libbrecht +10 more

A comparative encyclopedia of DNA elements in the mouse genome

Nature(2014)10.1038/nature13992

Top 2%

7.9DataRank

Top 2%1946 citations

Yong Cheng, Alessandra Breschi, Jost Vielmetter, Weisheng Wu, Tyrone Ryba +150 more

Defining functional DNA elements in the human genome

Proceedings of the National Academy of Sciences(2014)10.1073/pnas.1318948111

Top 3%

6.9DataRank

Top 3%755 citations

Valentina Snetkova, Louis Philip Benoit Bouvrette, Anshul Kundaje, Georgi K. Marinov, Lucas D. Ward +29 more

Expanded encyclopaedias of DNA elements in the human and mouse genomes

Nature(2020)10.1038/s41586-020-2493-4

Top 3%

6.4DataRank

Top 3%2615 citations

Federico Abascal, Reyes Acosta, Nicholas J. Addleman, Jessika Adrian, Veena Afzal +501 more

What fraction of the human genome is functional?

Genome Research(2011)10.1101/gr.116814.110

N/A

6.2DataRank · unranked

159 citations

Ross C. Hardison, Elaine A. Ostrander

The Genotype-Tissue Expression (GTEx) project

Nature Genetics(2013)10.1038/ng.2653

Top 3%

6.0DataRank

Top 3%10097 citations

Mike Salvatore, Rebecca Phillips, Bernadette Mestichelli, Saboor Shad, Richard Hasz +144 more

The changing mouse embryo transcriptome at whole tissue and single-cell resolution

Nature(2020)10.1038/s41586-020-2536-x

Top 5%

4.6DataRank

Top 5%202 citations

Brian A. Williams, Diane Trout, Georgi K. Marinov, Henry Amrhein, Libera Berghella +11 more

Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE

Science(2010)10.1126/science.1198374

Top 9%

2.4DataRank

Top 9%1089 citations

Sushmita Roy, Jason Ernst, Peter V. Kharchenko, Yanxiao Zhang, Richard S. Sandstrom +172 more

Erratum: Genome analysis of the platypus reveals unique signatures of evolution

Nature(2008)10.1038/nature07253

N/A

1.6DataRank · unranked

35 citations

LaDeana W. Hillier, Jennifer A. Marshall Graves, Kerstin Lindblad‐Toh, Elaine A. Ostrander, Frank Grützner +115 more

Integrated genomic analyses of ovarian carcinoma

Nature(2011)10.1038/nature10166

N/A

1.3DataRank · unranked

8094 citations

Debra Bell, Andrew Berchuck, Michael J. Birrer, Jeremy Chien, D. W. Cramer +268 more

Charting a course for genomic medicine from base pairs to bedside

Nature(2011)10.1038/nature09764

N/A

1.0DataRank · unranked

911 citations

Eric D. Green, Ross C. Hardison

Complete Khoisan and Bantu genomes from southern Africa

Nature(2010)10.1038/nature08795

N/A

0.932DataRank · unranked

500 citations

Webb Miller, Aakrosh Ratan, Lynn P. Tomsho, Belinda Giardine, Lindsay R. Kasson +44 more

The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles

Genome Biology(2023)10.1186/s13059-023-02915-y

N/A

0.692DataRank · unranked

17 citations

Carles B. Adsera, Jin wook Lee, Hongyang Li, Yuanfang Guan, Chun-Chieh Chang +46 more

Accurate and Reproducible Functional Maps in 127 Human Cell Types via 2D Genome Segmentation

bioRxiv (Cold Spring Harbor Laboratory)10.1101/118752

Top 45%

0.414DataRank

Top 45%6 citations

Ross C. Hardison, Yu Zhang

Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes

Genome Research(2024)10.1101/gr.277950.123

N/A

0.404DataRank · unranked

9 citations

Xi He, Belinda Giardine, Kathryn J. Isaac, Dylan J. Taylor, Rajiv C. McCoy +29 more

The ENCODE Imputation Challenge: A critical assessment of methods for cross-cell type imputation of epigenomic profiles

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.30.502157

N/A

0.190DataRank · unranked

2 citations

Jin wook Lee, Hongyang Li, Yuanfang Guan, Chun-Chieh Chang, Jen-Chien Chang +40 more

Systematic Integration of Epigenomic Landscapes in Human and Mouse Blood Cells to Predict Activity and Targets of Regulatory Elements

The FASEB Journal(2022)10.1096/fasebj.2022.36.s1.r5637

Top 100%

0DataRank

Top 100%0 citations

Guanjue Xiang, Camden Jansen, Cheryl A. Keller, Belinda Giardine, April Cockburn +6 more

Gene silencing dynamics are modulated by transiently active regulatory elements

Molecular Cell(2023)10.1016/j.molcel.2023.02.006

N/A

0DataRank · unranked

15 citations

Jing Luan, Zhe Zhang, A. Josephine Thrasher, Anran Huang, Megan S. Saari +12 more

Molecular basis of polycomb group protein-mediated fetal hemoglobin repression

Blood(2023)10.1182/blood.2022019578

N/A

0DataRank · unranked

15 citations

Xianjiang Lan, Peng Huang, Megan S. Saari, Eugene Khandros, Cheryl A. Keller +6 more

Snapshot: a package for clustering and visualizing epigenetic history during cell differentiation

BMC Bioinformatics(2023)10.1186/s12859-023-05223-1

N/A

0DataRank · unranked

15 citations

Belinda Giardine, Lin An, Chen Sun, Cheryl A. Keller, Elisabeth F. Heuston +6 more

RETROFIT: Reference-free deconvolution of cell-type mixtures in spatial transcriptomics

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.06.07.544126

N/A

0DataRank · unranked

5 citations

Xi He, A Park, Ross C. Hardison, Xiang Zhu, Qunhua Li +1 more

Interspecies regulatory landscapes and elements revealed by novel joint systematic integration of human and mouse blood cell epigenomes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.04.02.535219

N/A

0DataRank · unranked

4 citations

Xi He, Belinda Giardine, Kathryn J. Isaac, Dylan J. Taylor, Rajiv C. McCoy +29 more

Genome folding principles revealed in condensin-depleted mitotic chromosomes

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.09.566494

N/A

0DataRank · unranked

2 citations

Yinzhi Lin, En Lin, Fuhai Liu, Lirong Shu, Dannan Jing +12 more

LDB1 establishes multi-enhancer networks to regulate gene expression

Molecular Cell(2024)10.1016/j.molcel.2024.11.037

N/A

0DataRank · unranked

53 citations

Jessica Lam, Viraat Y. Goel, Siqing Wang, Xiaokang Wang, Susannah C. Midla +8 more

Highly discriminative globin gene activation by the noncanonical BAF chromatin remodeling complex

Blood(2025)10.1182/blood.2025029429

N/A

0DataRank · unranked

1 citations

Sindhu Billakanti, Vanessa Shehu, Kathryn Farrell, Sarah A. Cotteta, Bailey N. Godfrey +11 more

Divergence between transcriptomes and chromatin accessibility during differentiation from a bipotential progenitor cell population to erythroblasts and megakaryocytes

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.30.662383

N/A

0DataRank · unranked

0 citations

Belinda Giardine, Christapher S. Morrissey, Cheryl A. Keller, Elisabeth F. Heuston, Stacie M. Anderson +6 more

Transcriptome and chromatin accessibility divergence during differentiation of a bipotential progenitor cell population to erythroblasts and megakaryocytes

Journal of Biological Chemistry(2025)10.1016/j.jbc.2025.110819

N/A

0DataRank · unranked

0 citations

Belinda Giardine, Christapher S. Morrissey, Cheryl A. Keller, Elisabeth F. Heuston, Stacie M. Anderson +6 more

Publisher Correction: The ENCODE Imputation Challenge: a critical assessment of methods for cross-cell type imputation of epigenomic profiles

Genome Biology(2025)10.1186/s13059-025-03494-w

N/A

0DataRank · unranked

0 citations

Carles B. Adsera, Jin wook Lee, Hongyang Li, Yuanfang Guan, Chun-Chieh Chang +45 more

S3norm: simultaneous normalization of sequencing depth and signal-to-noise ratio in epigenomic data

Nucleic Acids Research(2020)10.1093/nar/gkaa105

N/A

0DataRank · unranked

58 citations

Cheryl A. Keller, Belinda Giardine, Lin An, Qunhua Li, Yu Zhang +2 more

HRI depletion cooperates with pharmacologic inducers to elevate fetal hemoglobin and reduce sickle cell formation

Blood Advances(2020)10.1182/bloodadvances.2020002475

N/A

0DataRank · unranked

18 citations

Eugene Khandros, Peng Huang, Xianjiang Lan, Carly L. Geronimo, Jeremy D. Grevet +8 more

Dynamic CTCF binding directly mediates interactions among cis-regulatory elements essential for hematopoiesis

Blood(2020)10.1182/blood.2020005780

N/A

0DataRank · unranked

46 citations

Cheng Li, Xing Tang, Yanghua He, Yichao Li, Tiffany Yee +9 more

Understanding heterogeneity of fetal hemoglobin induction through comparative analysis of F and A erythroblasts

Blood(2020)10.1182/blood.2020005058

N/A

0DataRank · unranked

40 citations

Peng Huang, Scott A. Peslak, Malini Sharma, Osheiza Abdulmalik, Belinda Giardine +5 more

ZNF410 uniquely activates the NuRD component CHD4 to silence fetal hemoglobin expression

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.08.31.274324

N/A

0DataRank · unranked

4 citations

Ren Ren, Ruopeng Feng, Lana C. Ly, Yemin Lan, Zhe Zhang +15 more

Effects of sheared chromatin length on ChIP-seq quality and sensitivity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.30.320697

N/A

0DataRank · unranked

2 citations

Elisabeth F. Heuston, Belinda Giardine, Maria Long, Amber Miller, Alexander Q. Wixom +4 more

Detecting local changes in chromatin architecture with false discovery control

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.03.281972

N/A

0DataRank · unranked

0 citations

Tao Yang, Maxim Imakaev, Ross C. Hardison, Qunhua Li, Hillary Koch

Distinct properties and functions of CTCF revealed by a rapidly inducible degron system

Cell Reports(2021)10.1016/j.celrep.2021.108783

N/A

0DataRank · unranked

99 citations

Guanjue Xiang, Pablo Aurelio Gómez-García, Jacob M. Tome, Zhe Zhang, Marit W. Vermunt +11 more

CTCF and transcription influence chromatin structure re-configuration after mitosis

Nature Communications(2021)10.1038/s41467-021-25418-5

N/A

0DataRank · unranked

83 citations

Jessica Lam, Di Zhang, Yemin Lan, Marit W. Vermunt, Cheryl A. Keller +4 more

Single-nucleotide-level mapping of DNA regulatory elements that control fetal hemoglobin expression

Nature Genetics(2021)10.1038/s41588-021-00861-8

N/A

0DataRank · unranked

64 citations

Yichao Li, Qian Qi, Peng Xu, Ruopeng Feng, Lance E. Palmer +10 more

S3V2-IDEAS: a package for normalizing, denoising and integrating epigenomic datasets across different cell types

Bioinformatics(2021)10.1093/bioinformatics/btab148

N/A

0DataRank · unranked

14 citations

Belinda Giardine, Shaun Mahony, Yu Zhang, Ross C. Hardison, Guanjue Xiang

HDAC1 is required for GATA-1 transcription activity, global chromatin occupancy and hematopoiesis

Nucleic Acids Research(2021)10.1093/nar/gkab737

N/A

0DataRank · unranked

15 citations

Jennifer Yang, Min Young Kim, Huacheng Luo, Nicholas Cesari, Tao Yang +6 more

Effects of sheared chromatin length on ChIP-seq quality and sensitivity

G3 Genes Genomes Genetics(2021)10.1093/g3journal/jkab101

N/A

0DataRank · unranked

12 citations

Alexander Q. Wixom, Elisabeth F. Heuston, Belinda Giardine, Chris C.‐S. Hsiung, Maria Long +7 more

CTCF and transcription influence chromatin structure re-configuration after mitosis

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.27.450099

N/A

0DataRank · unranked

9 citations

Jessica Lam, Di Zhang, Yemin Lan, Marit W. Vermunt, Cheryl A. Keller +4 more

Domain adaptive neural networks improve cross-species prediction of transcription factor binding

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.02.13.431115

N/A

0DataRank · unranked

7 citations

Divyanshi Srivastava, Avanti Shrikumar, Akshay Balsubramani, Ross C. Hardison, Anshul Kundaje +2 more

CTCF blocks anti-sense transcription initiation at divergent gene promoters

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.10.30.465508

N/A

0DataRank · unranked

5 citations

Camille M. Syrett, Marit W. Vermunt, Allison Coté, Jacob M. Tome, Haoyue Zhang +13 more

Subtype-specific 3D genome alteration in acute myeloid leukaemia

Nature(2022)10.1038/s41586-022-05365-x

N/A

0DataRank · unranked

217 citations

Fan Song, Huijue Lyu, Mikoto Kobayashi, Baozhen Zhang, Ziyu Zhao +24 more

Genomic landscape of TCRαβ and TCRγδ T-large granular lymphocyte leukemia

Blood(2022)10.1182/blood.2021013164

N/A

0DataRank · unranked

65 citations

Jeffrey C. Xing, Katharine B. Moosic, Johnson Ung, Vivian Chan, David Chung +11 more

CTCF blocks antisense transcription initiation at divergent promoters

Nature Structural & Molecular Biology(2022)10.1038/s41594-022-00855-y

N/A

0DataRank · unranked

28 citations

Marit W. Vermunt, Camille M. Syrett, Allison Coté, Jacob M. Tome, Haoyue Zhang +13 more

Domain-adaptive neural networks improve cross-species prediction of transcription factor binding

Genome Research(2022)10.1101/gr.275394.121

N/A

0DataRank · unranked

45 citations

Divyanshi Srivastava, Avanti Shrikumar, Akshay Balsubramani, Ross C. Hardison, Anshul Kundaje +2 more

Ross C. Hardison

Indexed papers

Top data-sharing exemplar

Papers