Jun Li

Also affiliated with The University of Texas MD Anderson Cancer Center, Howard Hughes Medical Institute, Janelia Research Campus

Biochemistry, Genetics and Molecular BiologyNeuroscienceMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

4.5Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

Science(2022)10.1126/science.abk2432

Top 5%

4.5DataRank

Top 5%871 citations

Jasper Janssens, Maxime De Waegeneer, Sai Saroja Kolluru, Kristofer Davie, Vincent Gardeux +95 more

Papers

Driven by 46 papers — median percentile 95. Top paper: “KIR + CD8 + T cells suppress pathogenic T cells and are active in autoimmune diseases and COVID-19”.

KIR + CD8 + T cells suppress pathogenic T cells and are active in autoimmune diseases and COVID-19

Science(2022)10.1126/science.abi9591

N/A

7.1DataRank · unranked

250 citations

Maxim Zaslavsky, Yapeng Su, Jing Guo, Michael J. Sikora, Vincent van Unen +31 more

Cell-Surface Proteomic Profiling in the Fly Brain Uncovers Wiring Regulators

Cell(2020)10.1016/j.cell.2019.12.029

N/A

4.8DataRank · unranked

226 citations

S. Han, Hongjie Li, Namrata D. Udeshi, Tanya Svinkina, D.R. Mani +14 more

Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly

Science(2022)10.1126/science.abk2432

Top 5%

4.5DataRank

Top 5%871 citations

Jasper Janssens, Maxime De Waegeneer, Sai Saroja Kolluru, Kristofer Davie, Vincent Gardeux +95 more

Ketogenic Diet Alters the Epigenetic and Immune Landscape of Prostate Cancer to Overcome Resistance to Immune Checkpoint Blockade Therapy

Cancer Research(2024)10.1158/0008-5472.can-23-2742

N/A

1.2DataRank · unranked

59 citations

Sharif Rahmy, Dailin Gan, Guoqiang Liu, Yini Zhu, Maxim Manyak +8 more

Spheromers reveal robust T cell responses to the Pfizer/BioNTech vaccine and attenuated peripheral CD8+ T cell responses post SARS-CoV-2 infection

Immunity(2023)10.1016/j.immuni.2023.03.005

N/A

0.668DataRank · unranked

85 citations

Vamsee Mallajosyula, Prabhu S. Arunachalam, Kattria van der Ploeg, Monali Manohar, Katharina Röltgen +22 more

Transcription factor Acj6 controls dendrite targeting via a combinatorial cell-surface code

Neuron(2022)10.1016/j.neuron.2022.04.026

N/A

0.596DataRank · unranked

52 citations

Jun Li, Hongjie Li, Namrata D. Udeshi, Tanya Svinkina, Daniel J. Orlin +15 more

Targeting EphA2 suppresses hepatocellular carcinoma initiation and progression by dual inhibition of JAK1/STAT3 and AKT signaling

Cell Reports(2021)10.1016/j.celrep.2021.108765

N/A

0.571DataRank · unranked

44 citations

Wei Hou, Aldeb Perera, Carlee Bettler, Jordan R. Beach, Xianzhong Ding +10 more

Aquaporin-7 Regulates the Response to Cellular Stress in Breast Cancer

Cancer Research(2020)10.1158/0008-5472.can-19-2269

N/A

0.561DataRank · unranked

41 citations

Verodia Charlestin, Man Wang, Zachary T. Walker, María Cristina Miranda-Vergara, Beth A. Facchine +6 more

Molecular and cellular mechanisms of teneurin signaling in synaptic partner matching

Cell(2024)10.1016/j.cell.2024.06.022

N/A

0.505DataRank · unranked

28 citations

Zhuoran Li, Cheng Lyu, Yixin Hu, Colleen N. McLaughlin, Kenneth Kin Lam Wong +15 more

Variable selection with false discovery rate control in deep neural networks

Nature Machine Intelligence(2021)10.1038/s42256-021-00308-z

N/A

0.442DataRank · unranked

18 citations

Jun Li, Zixuan Song

Synonymous codon substitutions modulate transcription and translation of a divergent upstream gene by modulating antisense RNA production

Proceedings of the National Academy of Sciences(2024)10.1073/pnas.2405510121

N/A

0.425DataRank · unranked

16 citations

Jacob D. Diehl, Gabriel Wright, Christopher David Bonar, Taylor J. Lundgren, McKenze J. Moss +7 more

SCIPAC: quantitative estimation of cell-phenotype associations

Genome biology(2024)10.1186/s13059-024-03263-1

N/A

0.360DataRank · unranked

10 citations

Yini Zhu, Xin Lü, Jun Li, Dailin Gan

Single-cell transcriptomes of developing and adult olfactory receptor neurons in Drosophila

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.10.08.332130

N/A

0.269DataRank · unranked

5 citations

Maria Brbić, Qijing Xie, Tongchao Li, Felix Horns, Sai Saroja Kolluru +10 more

Cell-surface Milieu Remodeling in Human Dendritic Cell Activation

The Journal of Immunology(2024)10.4049/jimmunol.2400089

N/A

0.269DataRank · unranked

5 citations

Charles Xu, Zuzhi Jiang, Shihong Max Gao, Qian Yin, Wei Luo +4 more

Transcription Factor Acj6 Controls Dendrite Targeting via Combinatorial Cell-Surface Codes

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.03.467130

N/A

0.241DataRank · unranked

4 citations

Jun Li, Hongjie Li, Namrata D. Udeshi, Tanya Svinkina, Daniel J. Orlin +15 more

Molecular organization of central cholinergic synapses

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2422173122

N/A

0.241DataRank · unranked

4 citations

Dean Zhang, Jun Yin, Caixia Long, George Yang, Yan Li +6 more

Synonymous codon substitutions regulate transcription and translation of an upstream gene

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.05.502938

N/A

0.208DataRank · unranked

3 citations

Gabriel Wright, Taylor J. Lundgren, McKenze J. Moss, Jun Li, Tijana Milenković +5 more

Cell-to-cell distance that combines gene expression and gene embeddings

Computational and Structural Biotechnology Journal(2024)10.1016/j.csbj.2024.10.044

N/A

0.208DataRank · unranked

3 citations

Dailin Gan, Jun Li, Fangfang Guo

Human KIR + CD8 + T cells target pathogenic T cells in Celiac disease and are active in autoimmune diseases and COVID-19

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.12.23.473930

N/A

0.165DataRank · unranked

2 citations

Maxim Zaslavsky, Yapeng Su, Michael J. Sikora, Vincent van Unen, Asbjørn Christophersen +27 more

Pan-cancer transcriptomic analysis of CNS tumor stroma identifies a population of perivascular fibroblasts that predict poor immunotherapy response in glioblastoma patients

Research Square(2023)10.21203/rs.3.rs-2931886/v1

N/A

0.127DataRank · unranked

1 citations

Alexander G. Steele, Xin Lü, Jun Li, Meenal Datta, Maksym Zarodniuk

Protein Signature Differentiating Neutrophils and Myeloid-Derived Suppressor Cells Determined Using a Human Isogenic Cell Line Model and Protein Profiling

Cells(2024)10.3390/cells13100795

N/A

0.104DataRank · unranked

1 citations

Jin Hu, Xiashiyao Zhang, Minzhi Liang, Xuechun Wang, Dailin Gan +6 more

Small, Open-Source Text-Embedding Models as Substitutes to OpenAI Models for Gene Analysis

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.15.638462

N/A

0.104DataRank · unranked

1 citations

Jun Li, Dailin Gan

Systems Pharmacodynamic Model of Combined Gemcitabine and Trabectedin in Pancreatic Cancer Cells. Part I: Effects on Signal Transduction Pathways Related to Tumor Growth

Journal of Pharmaceutical Sciences(2023)10.1016/j.xphs.2023.10.030

N/A

0.104DataRank · unranked

1 citations

Shichen Shen, Gilbert Koch, Xue Wang, Jun Li, Xiaomeng Shen +4 more

Network analysis of synonymous codon usage

Bioinformatics(2020)10.1093/bioinformatics/btaa603

N/A

0.104DataRank · unranked

1 citations

Gabriel Wright, Jacob Piland, Jun Li, Patricia L. Clark, Scott Emrich +2 more

Endocytome Profiling Uncovers Cell-Surface Protein Dynamics Underlying Neuronal Connectivity

SSRN Electronic Journal(2025)10.2139/ssrn.5383352

N/A

0DataRank · unranked

1 citations

Hui Ji, Katherine Dong, Chuanyun Xu, Kenneth Kim Lam Wong, Zhuoran Li +10 more

Nurturing Undergraduate Researchers in Biomedical Sciences

Cell(2020)10.1016/j.cell.2020.05.008

N/A

0DataRank · unranked

83 citations

Liqun Luo, Jun Li

ABL1, Overexpressed in Hepatocellular Carcinomas, Regulates Expression of NOTCH1 and Promotes Development of Liver Tumors in Mice

Gastroenterology(2020)10.1053/j.gastro.2020.03.013

N/A

0DataRank · unranked

55 citations

Wei Hou, Lennox Chitsike, Yingchen Xu, Carlee Bettler, Aldeb Perera +11 more

Properties of protein unfolded states suggest broad selection for expanded conformational ensembles

Proceedings of the National Academy of Sciences(2020)10.1073/pnas.2003773117

N/A

0DataRank · unranked

62 citations

Joshua A. Riback, Anabel Rodríguez, Hongyu Guo, Jun Li, Tobin R. Sosnick +2 more

Single-Cell Transcriptomes Reveal Diverse Regulatory Strategies for Olfactory Receptor Expression and Axon Targeting

Current Biology(2020)10.1016/j.cub.2020.01.049

N/A

0DataRank · unranked

60 citations

Tongchao Li, Felix Horns, Jun Li, Qijing Xie, Chuanyun Xu +11 more

A Statistical Approach of Background Removal and Spectrum Identification for SERS Data

Scientific Reports(2020)10.1038/s41598-020-58061-z

N/A

0DataRank · unranked

17 citations

Lifu Xiao, Chen Dai, Anh H. Nguyen, Laurie E. Littlepage, Zachary D. Schultz +2 more

Analysis of computational codon usage models and their association with translationally slow codons

PLoS ONE(2020)10.1371/journal.pone.0232003

N/A

0DataRank · unranked

13 citations

Anabel Rodríguez, Jun Li, Patricia L. Clark, Tijana Milenković, Scott Emrich +1 more

Analysis of computational codon usage models and their association with translationally slow codons

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.26.010488

N/A

0DataRank · unranked

0 citations

Anabel Rodríguez, Jun Li, Patricia L. Clark, Tijana Milenković, Scott Emrich +1 more

scSorter: assigning cells to known cell types according to marker genes

Genome biology(2021)10.1186/s13059-021-02281-7

N/A

0DataRank · unranked

146 citations

Jun Li, Hongyu Guo

CHARMING : Harmonizing synonymous codon usage to replicate a desired codon usage pattern

Protein Science(2021)10.1002/pro.4223

N/A

0DataRank · unranked

30 citations

Anabel Rodríguez, Jun Li, Tijana Milenković, Scott Emrich, Patricia L. Clark +1 more

Fine-Grained Synonymous Codon Usage Patterns and their Potential Role in Functional Protein Production

2021 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)(2021)10.1109/bibm52615.2021.9669745

N/A

0DataRank · unranked

1 citations

Jun Li, Scott Emrich, Ashley Babjac

Transcription Factor Control of Dendrite Targeting via Combinatorial Cell-Surface Codes

Research Square(2021)10.21203/rs.3.rs-983283/v1

N/A

0DataRank · unranked

0 citations

Qijing Xie, Jun Li, Hongjie Li, Namrata D. Udeshi, Tanya Svinkina +12 more

Multi‐layer sequential network analysis improves protein 3D structural classification

Proteins Structure Function and Bioinformatics(2022)10.1002/prot.26349

N/A

0DataRank · unranked

9 citations

Jacob Piland, Patricia L. Clark, Scott Emrich, Jun Li, Tijana Milenković +1 more

SCIBER: a simple method for removing batch effects from single-cell RNA-sequencing data

Bioinformatics(2022)10.1093/bioinformatics/btac819

N/A

0DataRank · unranked

7 citations

Jun Li, Dailin Gan

Neutrophils resist ferroptosis and promote breast cancer metastasis through aconitate decarboxylase 1

Cell Metabolism(2023)10.1016/j.cmet.2023.09.004

N/A

0DataRank · unranked

214 citations

Zhongshun Liu, Guoqiang Liu, Yuting Zhang, Sheng Liu, Dailin Gan +25 more

CNS tumor stroma transcriptomics identify perivascular fibroblasts as predictors of immunotherapy resistance in glioblastoma patients

npj Genomic Medicine(2023)10.1038/s41525-023-00381-w

N/A

0DataRank · unranked

25 citations

Alexander Steele, Xin Lü, Jun Li, Meenal Datta, Maksym Zarodniuk

Overcome Prostate Cancer Resistance to Immune Checkpoint Therapy with Ketogenic Diet-Induced Epigenetic Reprogramming

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.07.552383

N/A

0DataRank · unranked

6 citations

Sharif Rahmy, Dailin Gan, Yini Zhu, M.J. Manyak, Jun Li +3 more

The multimodal action of G alpha q in coordinating growth and homeostasis in the Drosophila wing imaginal disc

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.01.08.523049

N/A

0DataRank · unranked

0 citations

Dharsan K. Soundarrajan, Maria Unger, David Gazzo, Nilay Kumar, Jun Li +2 more

Integration of longitudinal load-bearing tissue MRI radiomics and neural network to predict knee osteoarthritis incidence

Journal of Orthopaedic Translation(2025)10.1016/j.jot.2025.01.007

N/A

0DataRank · unranked

7 citations

Jian Chen, Hao Liu, Zhengrui Liu, Bin Yu, Yang Wang +26 more

Scouter predicts transcriptional responses to genetic perturbations with large language model embeddings

Nature Computational Science(2025)10.1038/s43588-025-00912-8

N/A

0DataRank · unranked

7 citations

Jun Li, Ouyang Zhu

Chemical modulation of gut bacterial metabolism induces colanic acid and extends the lifespan of nematode and mammalian hosts

PLoS Biology(2025)10.1371/journal.pbio.3002749

N/A

0DataRank · unranked

3 citations

Marzia Savini, Matthew Cooke, Xin Wei, Dinghuan Deng, Shihong Max Gao +10 more

Small, open-source text-embedding models as substitutes to OpenAI models for gene analysis

Computational and Structural Biotechnology Journal(2025)10.1016/j.csbj.2025.07.053

N/A

0DataRank · unranked

1 citations

Jun Li, Dailin Gan

Jun Li

Indexed papers

Top data-sharing exemplar

Papers