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SCIBER: a simple method for removing batch effects from single-cell RNA-sequencing data

Bioinformatics(2022)10.1093/bioinformatics/btac819Source: DataRank Database

SCIBER: a simple method for removing batch effects from single-cell RNA-sequencing data is a research paper published in Bioinformatics (2022). On theSindex it has a DataRank of 0. It has been cited 7 times.

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0DataRank · unranked

Scored on demand from live citation data

Open Access7 citations

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (4 grants)Impact (FWCI 0.42)OA: hybridTopics (29)IDs (PubMed, PMC, OpenAlex)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (2)

Jun Li ORCID,Dailin Gan ORCID

Live enrichment

PubMed:36548380 PMC:PMC9848058 OpenAlex:https://openalex.org/W4312094563

National Institutes of Health

Grant: R01CA252878

National Institutes of Health

Grant: R01CA222405

National Institutes of Health

Grant: 3R01CA222405-02S1

Mechanisms of neuroinflammation in brain metastasis progression

National Institutes of Health

Grant: 5R01CA252878-02

CXCL5/CXCR2 axis as a therapeutic vulnerability of breast cancer metastasis to bone

FWCI

0.42

Citation Percentile

0.6%

Citation Trend

2023

2024

2025

2026

hybridLicense: cc-by

journalhttps://academic.oup.com/bioinformatics/article-pdf/39/1/btac819/48763631/btac819.pdf

publisherhttps://academic.oup.com/bioinformatics/article-pdf/39/1/btac819/48763631/btac819.pdf

publisherhttps://academic.oup.com/bioinformatics/advance-article-pdf/39/1/btac819/48759254/btac819.pdf

journalhttps://doi.org/10.1093/bioinformatics/btac819

repositoryhttps://pubmed.ncbi.nlm.nih.gov/36548380

Fields of Study

Single-cell and spatial transcriptomicsFerroptosis and cancer prognosisCell Image Analysis Techniques0301 basic medicine03 medical and health sciences0206 medical engineering02 engineering and technology

MeSH Terms

Exome SequencingAlgorithmsHumansRNASoftwareSingle-Cell Analysis

Keywords

Computer scienceScalabilityData miningBatch processingDimension (graph theory)IntegratorExpression (computer science)DatabaseMathematicsOriginal PaperExome SequencingHumansRNASingle-Cell AnalysisAlgorithmsSoftware

Sustainable Development Goals

SDG 0: Partnerships for the goals