Kimberly Glass

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.1Author DataRank

Indexed papers

2in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 2 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

GRAND: a database of gene regulatory network models across human conditions

Nucleic Acids Research(2021)10.1093/nar/gkab778

Top 13%

1.7DataRank

Top 13%122 citations

Camila M. Lopes‐Ramos, Deborah Weighill, Abhijeet R. Sonawane, Rebekka Burkholz, Behrouz Shamsaei +5 more

Papers

Driven by 43 papers — median percentile 73. Top paper: “Multi-scale chromatin state annotation using a hierarchical hidden Markov model”.

Multi-scale chromatin state annotation using a hierarchical hidden Markov model

Nature Communications(2017)10.1038/ncomms15011

N/A

1.9DataRank · unranked

65 citations

Wouter Meuleman, Jialiang Huang, Kimberly Glass, Luca Pinello, Jianrong Wang +3 more

GRAND: a database of gene regulatory network models across human conditions

Nucleic Acids Research(2021)10.1093/nar/gkab778

Top 13%

1.7DataRank

Top 13%122 citations

Camila M. Lopes‐Ramos, Deborah Weighill, Abhijeet R. Sonawane, Rebekka Burkholz, Behrouz Shamsaei +5 more

Current and future directions in network biology

Bioinformatics Advances(2024)10.1093/bioadv/vbae099

N/A

1.6DataRank · unranked

100 citations

Michelle M. Li, Aydin Wells, Kimberly Glass, Deisy Morselli Gysi, Krishnan, Arjun +32 more

Molecular networks in Network Medicine: Development and applications

WIREs Systems Biology and Medicine(2020)10.1002/wsbm.1489

N/A

0.812DataRank · unranked

223 citations

Harald Schmidt, Eleni Anastasiadou, Lucia Altucci, Marco Angelini, Lina Badimón +21 more

Nutrition state of science and dementia prevention: recommendations of the Nutrition for Dementia Prevention Working Group

The Lancet Healthy Longevity(2022)10.1016/s2666-7568(22)00120-9

N/A

0.712DataRank · unranked

114 citations

Cécilia Samieri, Gill Livingston, Kimberly Glass, Maude Wagner, Christy Tangney +22 more

Single Cell Transcriptomic Analysis Reveals Organ Specific Pericyte Markers and Identities

Frontiers in Cardiovascular Medicine(2022)10.3389/fcvm.2022.876591

N/A

0.675DataRank · unranked

89 citations

Enrico Maiorino, Hyunbum Kim, Kimberly Glass, Benjamin A. Raby, Ke Yuan +1 more

Longitudinal Association Between Muscle Loss and Mortality in Ever Smokers

CHEST Journal(2021)10.1016/j.chest.2021.10.047

N/A

0.571DataRank · unranked

44 citations

Rafael Moreta-Martínez, Wassim W. Labaki, Matthew Strand, Elizabeth A. Regan, Jessica Bon +70 more

GRAND: A database of gene regulatory network models across human conditions

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.06.18.448997

Top 42%

0.455DataRank

Top 42%8 citations

Camila M. Lopes‐Ramos, Deborah Weighill, Abhijeet R. Sonawane, Rebekka Burkholz, Behrouz Shamsaei +5 more

Sex-Biased Regulation of Extracellular Matrix Genes in Chronic Obstructive Pulmonary Disease

American Journal of Respiratory Cell and Molecular Biology(2024)10.1165/rcmb.2024-0226oc

N/A

0.416DataRank · unranked

15 citations

Katherine H. Shutta, Min Hyung Ryu, Yichen Huang, Enakshi Saha, John Ziniti +10 more

Current and future directions in network biology

arXiv (Cornell University)(2023)10.48550/arxiv.2309.08478

N/A

0.208DataRank · unranked

3 citations

Michelle M. Li, Aydin Wells, Kimberly Glass, Deisy Morselli Gysi, Krishnan, Arjun +32 more

HHIP protein interactions in lung cells provide insight into COPD pathogenesis

Human Molecular Genetics(2025)10.1093/hmg/ddaf016

N/A

0.208DataRank · unranked

3 citations

Hiroyuki Inuzuka, Peter J. Castaldi, Jeong H. Yun, Zhonghui Xu, Wardatul Jannat Anamika +7 more

ETV2 regulates PARP-1 binding protein to induce ER stress-mediated cell death in tuberin-deficient cells

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.11.08.467714

N/A

0DataRank · unranked

0 citations

Anthony M. Lamattina, Gustavo Pacheco–Rodriguez, Julie Ng, Xiaoli Liu, Abhijeet R. Sonawane +15 more

Protein interaction networks provide insight into fetal origins of chronic obstructive pulmonary disease

Respiratory Research(2022)10.1186/s12931-022-01963-5

N/A

0DataRank · unranked

22 citations

Seung Han Baek, Priyadarshini Kachroo, Jarrett D. Morrow, Kelan G. Tantisira, Edwin K. Silverman +5 more

Transcriptional changes in human palate and skin healing

Wound Repair and Regeneration(2022)10.1111/wrr.13068

N/A

0DataRank · unranked

15 citations

Lin Chen, Megan E. Schrementi, Junhe Shi, Phillip T. Marucha, Kimberly Glass +2 more

ETV2 regulates PARP-1 binding protein to induce ER stress–mediated death in tuberin-deficient cells

Life Science Alliance(2022)10.26508/lsa.202201369

N/A

0DataRank · unranked

10 citations

Anthony M. Lamattina, Gustavo Pacheco–Rodriguez, Julie Ng, Xiaoli Liu, Abhijeet R. Sonawane +15 more

gpuZoo: Cost-effective estimation of gene regulatory networks using the Graphics Processing Unit

NAR Genomics and Bioinformatics(2022)10.1093/nargab/lqac002

N/A

0DataRank · unranked

9 citations

Daniel Morgan, Kimberly Glass, Marieke L. Kuijjer, Dawn L. DeMeo, John Quackenbush +1 more

The Network Zoo: a multilingual package for the inference and analysis of biological networks

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.05.30.494077

N/A

0DataRank · unranked

1 citations

Tian Wang, Camila M. Lopes‐Ramos, Viola Fanfani, Deborah Weighill, Rebekka Burkholz +19 more

Editorial: Applications and Methods in Genomic Networks

Frontiers in Genetics(2022)10.3389/fgene.2022.936015

N/A

0DataRank · unranked

0 citations

Kimberly Glass, Marieke L. Kuijjer, Maud Fagny

Automated selection of changepoints using empirical P-values and trimming

JAMIA Open(2022)10.1093/jamiaopen/ooac090

N/A

0DataRank · unranked

0 citations

Arlene E. Chung, Kimberly Glass, Matthew Quinn

The Network Zoo: a multilingual package for the inference and analysis of gene regulatory networks

Genome biology(2023)10.1186/s13059-023-02877-1

N/A

0DataRank · unranked

77 citations

Tian Wang, Camila M. Lopes‐Ramos, Viola Fanfani, Des Weighill, Rebekka Burkholz +20 more

Single-sample network modeling on omics data

BMC Biology(2023)10.1186/s12915-023-01783-z

N/A

0DataRank · unranked

12 citations

Kimberly Glass, Marieke L. Kuijjer, Margherita De Marzio

Detecting and dissecting signaling crosstalk via the multilayer network integration of signaling and regulatory interactions

Nucleic Acids Research(2023)10.1093/nar/gkad1035

N/A

0DataRank · unranked

10 citations

Seung Han Baek, Ian K.Y. Lo, Benjamin A. Raby, Edwin K. Silverman, Scott T. Weiss +3 more

Adjustment of spurious correlations in co-expression measurements from RNA-Sequencing data

Bioinformatics(2023)10.1093/bioinformatics/btad610

N/A

0DataRank · unranked

10 citations

Camila M. Lopes‐Ramos, Manuela Zucknick, Geir Kjetil Sandve, Kimberly Glass, Marieke L. Kuijjer +1 more

Bayesian Optimized sample-specific Networks Obtained By Omics data (BONOBO)

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.16.567119

N/A

0DataRank · unranked

5 citations

Viola Fanfani, Panagiotis Mandros, Marouen Ben-Guebila, Jonas Fischer, Katherine Hoff-Shutta +5 more

Unlocking Mitochondrial Dysfunction-Associated Senescence (MiDAS) with NAD + – a Boolean Model of Mitochondrial Dynamics and Cell Cycle Control

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.12.18.572194

N/A

0DataRank · unranked

1 citations

Dávid Deritei, Katherine Fleig, Marlayna Harris, Peter Regan, Kimberly Glass +2 more

Mitigating off‐target effects of small RNAs: conventional approaches, network theory and artificial intelligence

British Journal of Pharmacology(2024)10.1111/bph.17302

N/A

0DataRank · unranked

69 citations

Bettina Benczik, Olivér M. Balogh, S. Marton, Eszter Puhl, Mátyás Pétervári +10 more

The metabolic role of vitamin D in children’s neurodevelopment: a network study

Scientific Reports(2024)10.1038/s41598-024-67835-8

N/A

0DataRank · unranked

12 citations

Jessica Lasky‐Su, Su H. Chu, Nicole Prince, Augusto A. Litonjua, Scott T. Weiss +3 more

Unlocking mitochondrial dysfunction-associated senescence (MiDAS) with NAD+ – A Boolean model of mitochondrial dynamics and cell cycle control

Translational Oncology(2024)10.1016/j.tranon.2024.102084

N/A

0DataRank · unranked

7 citations

Dávid Deritei, Katherine Fleig, Marlayna Harris, Peter Regan, Kimberly Glass +2 more

Polygenic and transcriptional risk scores identify chronic obstructive pulmonary disease subtypes in the COPDGene and ECLIPSE cohort studies

EBioMedicine(2024)10.1016/j.ebiom.2024.105429

N/A

0DataRank · unranked

4 citations

Julian Hecker, John Platig, Jingzhou Zhang, Auyon Ghosh, Katherine Pratte +21 more

An Alternatively Translated Isoform of PPARG Suggests AF-1 Domain Inhibition as an Insulin Sensitization Target

Diabetes(2025)10.2337/db24-0497

N/A

0DataRank · unranked

3 citations

Karen Alejandra Méndez‐Lara, Siqi Hu, Rachel Y. Diao, Guru Bhavimani, Rubén Hernández +6 more

Multi-omics protein signaling networks identify sex-specific therapeutic candidates in lung adenocarcinoma

Biology of Sex Differences(2025)10.1186/s13293-025-00752-1

N/A

0DataRank · unranked

2 citations

Enakshi Saha, Jonas Fischer, Marouen Ben Guebila, Viola Fanfani, Katherine H. Shutta +6 more

Identifying Sex Differences in Lung Adenocarcinoma Using Multi-Omics Integrative Protein Signaling Networks

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.02.03.636354

N/A

0DataRank · unranked

2 citations

Enakshi Saha, Jonas Fischer, Marouen Ben Guebila, Viola Fanfani, Katherine H. Shutta +6 more

miRNA-mRNA network analysis identifies PAX5 as a potential regulator of adaptive immune response in COPD

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.05.06.651484

N/A

0DataRank · unranked

1 citations

Margherita De Marzio, Brian D. Hobbs, Craig P. Hersh, Min Hyung Ryu, Marieke L. Kuijjer +6 more

Sex Differences in Gene Expression and Regulatory Networks across 29 Human Tissues

Cell Reports(2020)10.1016/j.celrep.2020.107795

N/A

0DataRank · unranked

544 citations

Cho-Yi Chen, Marieke L. Kuijjer, Joseph N. Paulson, Abhijeet R. Sonawane, Maud Fagny +5 more

Integrated transcriptomic correlation network analysis identifies COPD molecular determinants

Scientific Reports(2020)10.1038/s41598-020-60228-7

N/A

0DataRank · unranked

51 citations

Giulia Fiscon, Federica Conte, Valerio Licursi, Jarrett D. Morrow, Craig P. Hersh +6 more

Prediagnostic 25-Hydroxyvitamin D Concentrations in Relation to Tumor Molecular Alterations and Risk of Breast Cancer Recurrence

Cancer Epidemiology Biomarkers & Prevention(2020)10.1158/1055-9965.epi-19-1217

N/A

0DataRank · unranked

17 citations

Yujing J. Heng, Donghao Lu, Natalie Dupré, Kevin H. Kensler, Kimberly Glass +8 more

Early-Life Body Adiposity and the Breast Tumor Transcriptome

JNCI Journal of the National Cancer Institute(2020)10.1093/jnci/djaa169

N/A

0DataRank · unranked

16 citations

Cheng Peng, Catherine Guranich, Yujing J. Heng, Gabrielle M. Baker, Christopher A. Rubadue +6 more

Low dose environmental radon exposure and breast tumor gene expression

BMC Cancer(2020)10.1186/s12885-020-07184-7

N/A

0DataRank · unranked

9 citations

Natalie Dupré, Trang VoPham, Yujing J. Heng, Gabrielle M. Baker, Christopher A. Rubadue +10 more

PUMA: PANDA Using MicroRNA Associations

Bioinformatics(2020)10.1093/bioinformatics/btaa571

N/A

0DataRank · unranked

36 citations

Maud Fagny, Alessandro Marin, John Quackenbush, Kimberly Glass, Marieke L. Kuijjer

Involvement of fine particulate matter exposure with gene expression pathways in breast tumor and adjacent-normal breast tissue

Environmental Research(2020)10.1016/j.envres.2020.109535

N/A

0DataRank · unranked

1 citations

Yujing J. Heng, Benjamin A. Raby, Kimberly Glass, Jaime E. Hart, J Chu +7 more

Genomic signatures of the unjamming transition in compressed human bronchial epithelial cells

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.09.01.277962

N/A

0DataRank · unranked

7 citations

Ayşe Kılıç, Enrico Maiorino, Jennifer A. Mitchel, Maureen McGill, Robert Chase +5 more

Genomic signatures of the unjamming transition in compressed human bronchial epithelial cells

Science Advances(2021)10.1126/sciadv.abf1088

N/A

0DataRank · unranked

35 citations

Ayşe Kılıç, Enrico Maiorino, Jennifer A. Mitchel, Chimwemwe Mwase, Michael J. O’Sullivan +7 more

Reconstructing Sample-Specific Networks using LIONESS

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.09.27.461954

N/A

0DataRank · unranked

4 citations

Kimberly Glass, Marieke L. Kuijjer

Kimberly Glass

Indexed papers

Top data-sharing exemplar

Papers