Zhana Duren

Also affiliated with Indiana University – Purdue University Indianapolis

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 17 papers. Top paper: “Dynamic chromatin regulatory landscape of human CAR T cell exhaustion”.

Dynamic chromatin regulatory landscape of human CAR T cell exhaustion

Proceedings of the National Academy of Sciences(2021)10.1073/pnas.2104758118

N/A

1.9DataRank · unranked

67 citations

Rachel C. Lynn, Jeff M. Granja, Evan Weber, Maxwell R. Mumbach, Yang Zhao +8 more

Regulatory analysis of single cell multiome gene expression and chromatin accessibility data with scREG

Genome biology(2022)10.1186/s13059-022-02682-2

N/A

0.564DataRank · unranked

42 citations

Fengge Chang, Fnu Naqing, Jingxue Xin, Qiao Liu, Wing Hung Wong +1 more

Modeling regulatory network topology improves genome-wide analyses of complex human traits

Nature Communications(2021)10.1038/s41467-021-22588-0

N/A

0.561DataRank · unranked

41 citations

Zhana Duren, Wing Hung Wong, Xiang Zhu

Modeling combinatorial regulation from single-cell multi-omics provides regulatory units underpinning cell type landscape using cRegulon

Genome biology(2025)10.1186/s13059-025-03680-w

N/A

0.104DataRank · unranked

1 citations

Xi Chen, Zhana Duren, Jingxue Xin, Miao Hao, Qiuyue Yuan +3 more

Sc-compReg enables the comparison of gene regulatory networks between conditions using single-cell data

Nature Communications(2021)10.1038/s41467-021-25089-2

N/A

0DataRank · unranked

45 citations

Wenhui Sophia Lu, Joseph G. Arthur, Preyas Shah, Jingxue Xin, Francesca Meschi +5 more

hReg-CNCC reconstructs a regulatory network in human cranial neural crest cells and annotates variants in a developmental context

Communications Biology(2021)10.1038/s42003-021-01970-0

N/A

0DataRank · unranked

22 citations

Zhana Duren, Ziyi Xiong, Sijia Wang, Fan Liu, Wing Hung Wong +2 more

Chromatin accessibility landscape and regulatory network of high-altitude hypoxia adaptation

Nature Communications(2020)10.1038/s41467-020-18638-8

N/A

0DataRank · unranked

118 citations

Hui Zhang, Yaoxi He, Zhana Duren, Caijuan Bai, Lang Chen +13 more

Integration of single-cell multi-omics data by regression analysis on unpaired observations

Genome biology(2022)10.1186/s13059-022-02726-7

N/A

0DataRank · unranked

17 citations

Zhana Duren, Qiuyue Yuan

Human Genetic Variants Associated with COVID-19 Severity are Enriched in Immune and Epithelium Regulatory Networks

Phenomics(2022)10.1007/s43657-022-00066-x

N/A

0DataRank · unranked

16 citations

Xianwen Ren, Zhana Duren, Yong Wang, Zhanying Feng

Continuous lifelong learning for modeling of gene regulation from single cell multiome data by leveraging atlas-scale external data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.01.551575

N/A

0DataRank · unranked

7 citations

Zhana Duren, Qiuyue Yuan

Continuous lifelong learning for modeling of gene regulation from single cell multiome data by leveraging atlas-scale external data

Research Square(2023)10.21203/rs.3.rs-3236310/v1

N/A

0DataRank · unranked

0 citations

Zhana Duren

Inferring gene regulatory networks from single-cell multiome data using atlas-scale external data

Nature Biotechnology(2024)10.1038/s41587-024-02182-7

N/A

0DataRank · unranked

108 citations

Zhana Duren, Qiuyue Yuan

Integrated single-cell multiomic profiling of caudate nucleus suggests key mechanisms in alcohol use disorder

Nature Communications(2025)10.1038/s41467-025-64136-0

N/A

0DataRank · unranked

7 citations

Hongyu Gao, Xiaona Chu, Qiuyue Yuan, Patrick C. McGuire, Dongbing Lai +16 more

MIMIC: an optimization method to identify cell type-specific marker panel for cell sorting

Briefings in Bioinformatics(2021)10.1093/bib/bbab235

N/A

0DataRank · unranked

4 citations

Zhana Duren, Qiuyue Yuan, Henry Li, Andrew P. Hutchins, Wing Hung Wong +2 more

Time course regulatory analysis based on paired expression and chromatin accessibility data

Genome Research(2020)10.1101/gr.257063.119

N/A

0DataRank · unranked

64 citations

Xi Chen, Jingxue Xin, Yong Wang, Wing Hung Wong, Zhana Duren

Modeling Regulatory Network Topology Improves Genome-Wide Analyses of Complex Human Traits

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.03.13.990010

N/A

0DataRank · unranked

3 citations

Zhana Duren, Wing Hung Wong, Xiang Zhu

Tyrosine kinase inhibitors induce mitochondrial dysfunction during cardiomyocyte differentiation through alteration of GATA4-mediated networks

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.05.04.077024

N/A

0DataRank · unranked

1 citations

Haodi Wu, Qing-Jun Luo, Chao Jiang, Zhana Duren, Kevin Van Bortle +22 more