Jonathan P. Jacobs

Also affiliated with UCLA Health, VA Greater Los Angeles Healthcare System

Biochemistry, Genetics and Molecular BiologyMedicine

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 3%percentile

1.0Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

Disease Features and Gastrointestinal Microbial Composition in Patients with Systemic Sclerosis from Two Independent Cohorts

ACR Open Rheumatology(2022)10.1002/acr2.11387

Top 20%

1.0DataRank

Top 20%30 citations

S. Melanie Lee, Venu Lagishetty, Meifang Wu, Natalie Howlett, James English +5 more

Papers

Driven by 57 papers — median percentile 80. Top paper: “Disease Features and Gastrointestinal Microbial Composition in Patients with Systemic Sclerosis from Two Independent Cohorts”.

Disease Features and Gastrointestinal Microbial Composition in Patients with Systemic Sclerosis from Two Independent Cohorts

ACR Open Rheumatology(2022)10.1002/acr2.11387

Top 20%

1.0DataRank

Top 20%30 citations

S. Melanie Lee, Venu Lagishetty, Meifang Wu, Natalie Howlett, James English +5 more

Reporting guidelines for human microbiome research: the STORMS checklist

Nature Medicine(2021)10.1038/s41591-021-01552-x

N/A

0.918DataRank · unranked

454 citations

Audrey Renson, Genomic Standards Consortium, Cesare Furlanello, Shaimaa Elsafoury, Ludwig Geistlinger +98 more

Duodenal Microbiome and Serum Metabolites Predict Hepatocellular Carcinoma in a Multicenter Cohort of Patients with Cirrhosis

Digestive Diseases and Sciences(2021)10.1007/s10620-021-07299-2

N/A

0.806DataRank · unranked

24 citations

Jonathan P. Jacobs, Vatche G. Agopian, Joseph R. Pisegna, Walid S. Ayoub, Francisco Durazo +11 more

Pilot Trial of Vitamin D3 and Calcifediol in Healthy Vitamin D Deficient Adults: Does It Change the Fecal Microbiome?

The Journal of Clinical Endocrinology & Metabolism(2021)10.1210/clinem/dgab573

N/A

0.706DataRank · unranked

15 citations

S. Melanie Lee, Venu Lagishetty, Carter Gottleib, Jonathan P. Jacobs, John S. Adams +1 more

Phase I trial of Bermekimab with nanoliposomal irinotecan and 5-fluorouracil/folinic acid in advanced pancreatic ductal adenocarcinoma

Scientific Reports(2022)10.1038/s41598-022-19401-3

N/A

0.587DataRank · unranked

10 citations

Shant Thomassian, Sungjin Kim, Gillian Gresham, Natalie Moshayedi, Jason Ye +9 more

Intestinal microbiome in response to air pollutant exposure in pregestational and gestational murine females and their male and female offspring

Reproductive Toxicology(2025)10.1016/j.reprotox.2025.109150

N/A

0.104DataRank · unranked

1 citations

Amit Ganguly, Tien S. Dong, Venu Lagishetty, Jonathan P. Jacobs, Sherin U. Devaskar +1 more

Analysis of brain networks and fecal metabolites reveals brain–gut alterations in premenopausal females with irritable bowel syndrome

Translational Psychiatry(2020)10.1038/s41398-020-01071-2

N/A

0DataRank · unranked

34 citations

Emeran A. Mayer, Kan Gao, Jennifer S. Labus, Bruce D. Naliboff, Kirsten Tillisch +5 more

Dietary Protein, Fiber and Coffee Are Associated with Small Intestine Microbiome Composition and Diversity in Patients with Liver Cirrhosis

Nutrients(2020)10.3390/nu12051395

N/A

0DataRank · unranked

29 citations

Tien S. Dong, Vatche G. Agopian, Joseph R. Pisegna, Francisco Durazo, Pedram Enayati +10 more

Shifts in microbial diversity, composition and functionality in the gut and genital microbiome during a natural SIV infection in vervet monkeys

Research Square(2020)10.21203/rs.2.24430/v1

N/A

0DataRank · unranked

0 citations

Tien S. Dong, Venu Lagishetty, William Katzka, Jonathan P. Jacobs, Christopher A. Schmitt +9 more

Unhealthy Lifestyle and Gut Dysbiosis: A Better Understanding of the Effects of Poor Diet and Nicotine on the Intestinal Microbiome

Frontiers in Endocrinology(2021)10.3389/fendo.2021.667066

N/A

0DataRank · unranked

226 citations

Doron D. Kahana, Simran Ghuman, Haley P. Wilson, Julian B. Wilson, Samuel C. J. Kim +5 more

Early life adversity predicts brain-gut alterations associated with increased stress and mood

Neurobiology of Stress(2021)10.1016/j.ynstr.2021.100348

N/A

0DataRank · unranked

49 citations

Emeran A. Mayer, Vadim Osadchiy, Zixi Chen, Vishvak Subramanyam, Yurui Zhang +9 more

Development of the infant gut microbiome predicts temperament across the first year of life

Development and Psychopathology(2021)10.1017/s0954579421000456

N/A

0DataRank · unranked

47 citations

S. Melanie Lee, Kyle S. Wiley, Venu Lagishetty, Curt A. Sandman, Jonathan P. Jacobs +2 more

Effect of Exclusion Diets on Symptom Severity and the Gut Microbiota in Patients With Irritable Bowel Syndrome

Clinical Gastroenterology and Hepatology(2021)10.1016/j.cgh.2021.05.027

N/A

0DataRank · unranked

33 citations

Tien S. Dong, Swapna Joshi, Nancee Jaffe, Charlene Choo, Cathy Liu +9 more

Altered brain structural connectivity in patients with longstanding gut inflammation is correlated with psychological symptoms and disease duration

NeuroImage Clinical(2021)10.1016/j.nicl.2021.102613

N/A

0DataRank · unranked

30 citations

Ravi R. Bhatt, Hao Wang, Priten Vora, Beatrix Krause, Jenny Sauk +7 more

A bidirectional relationship between anxiety, depression and gastrointestinal symptoms in Parkinson’s disease

Clinical Parkinsonism & Related Disorders(2021)10.1016/j.prdoa.2021.100104

N/A

0DataRank · unranked

24 citations

Brandon Dominguez, Joseph Bunch, Carmen Uribe, Yenny Valenzuela, Jonathan P. Jacobs +1 more

The Ocular Microbiome Is Altered by Sampling Modality and Age

Translational Vision Science & Technology(2021)10.1167/tvst.10.12.24

N/A

0DataRank · unranked

20 citations

Tien S. Dong, Kayti Luu, Venu Lagishetty, Farzaneh Sedighian, Nerea Arias-Jayo +3 more

Oxidized phospholipids cause changes in jejunum mucus that induce dysbiosis and systemic inflammation

Journal of Lipid Research(2021)10.1016/j.jlr.2021.100153

N/A

0DataRank · unranked

17 citations

A. Chattopadhyay, Víctor Grijalva, Nasrin Dorreh, Venu Lagishetty, Jonathan P. Jacobs +7 more

Electrical impedance tomography for non-invasive identification of fatty liver infiltrate in overweight individuals

Scientific Reports(2021)10.1038/s41598-021-99132-z

N/A

0DataRank · unranked

14 citations

Zi-Yu Huang, Shu‐Fu Shih, Yuan Luo, Arthur Ko, Qingyu Cui +13 more

The Association Between Breast Density and Gut Microbiota Composition at 2 Years Post-Menarche: A Cross-Sectional Study of Adolescents in Santiago, Chile

Frontiers in Cellular and Infection Microbiology(2021)10.3389/fcimb.2021.794610

N/A

0DataRank · unranked

4 citations

Jonathan P. Jacobs, Jessica Hoehner, Ana Pereira, Juan Cristóbal Gana, Camila Corvalán +2 more

Obesity is associated with a distinct brain-gut microbiome signature that connects Prevotella and Bacteroides to the brain’s reward center

Gut Microbes(2022)10.1080/19490976.2022.2051999

N/A

0DataRank · unranked

86 citations

Michelle Guan, Emeran A. Mayer, Jean Stains, Xiaoyue Cathy Liu, Priten Vora +6 more

Crohn’s disease in endoscopic remission, obesity, and cases of high genetic risk demonstrate overlapping shifts in the colonic mucosal-luminal interface microbiome

Genome Medicine(2022)10.1186/s13073-022-01099-7

N/A

0DataRank · unranked

31 citations

Maryam Goudarzi, Venu Lagishetty, Dalin Li, Tytus D. Mak, Maomeng Tong +14 more

“Following the Breath”: A Trauma-Informed Intervention for Educator Wellness in Rural Montana

Education Sciences(2022)10.3390/educsci13010023

N/A

0DataRank · unranked

9 citations

Alexandra Aylward, Brandon G. Scott, Jonathan P. Jacobs, Lauren Davis

Author Correction: Phase I trial of Bermekimab with nanoliposomal irinotecan and 5‑fuorouracil/folinic acid in advanced pancreatic ductal adenocarcinoma

Scientific Reports(2022)10.1038/s41598-022-23619-6

N/A

0DataRank · unranked

1 citations

Shant Thomassian, Sungjin Kim, Gillian Gresham, Natalie Moshayedi, Jason Ye +9 more

Microbial changes from bariatric surgery alters glucose-dependent insulinotropic polypeptide and prevents fatty liver disease

Gut Microbes(2023)10.1080/19490976.2023.2167170

N/A

0DataRank · unranked

33 citations

William Katzka, Julianne C. Yang, Candace Chang, Nerea Arias-Jayo, Venu Lagishetty +9 more

Gastrointestinal tract involvement in systemic sclerosis: The roles of diet and the microbiome

Seminars in Arthritis and Rheumatism(2023)10.1016/j.semarthrit.2023.152185

N/A

0DataRank · unranked

27 citations

Kristofer Andréasson, Zsuzsanna H. McMahan, Heather Bukiri, Natalie Howlett, Venu Lagishetty +4 more

Biotin Deficiency Induces Intestinal Dysbiosis Associated with an Inflammatory Bowel Disease-like Phenotype

Nutrients(2023)10.3390/nu15020264

N/A

0DataRank · unranked

28 citations

Jonathan P. Jacobs, Ji Won Hwang, Subrata Sabui, Fengting Liang, Hamid M. Said +2 more

Microbial and Metabolite Signatures of Stress Reactivity in Ulcerative Colitis Patients in Clinical Remission Predict Clinical Flare Risk

Inflammatory Bowel Diseases(2023)10.1093/ibd/izad185

N/A

0DataRank · unranked

17 citations

Jenny Sauk, Aaron Ahdoot, Fengting Liang, William Katzka, Hyo Jin Ryu +6 more

Role of enterocyte Enpp2 and autotaxin in regulating lipopolysaccharide levels, systemic inflammation, and atherosclerosis

Journal of Lipid Research(2023)10.1016/j.jlr.2023.100370

N/A

0DataRank · unranked

15 citations

Pallavi Mukherjee, Dawoud Sulaiman, Huan Wang, Victor Girjalva, Nasrin Dorreh +7 more

Contact with caregivers is associated with composition of the infant gastrointestinal microbiome in the first 6 months of life

American Journal of Biological Anthropology(2023)10.1002/ajpa.24858

N/A

0DataRank · unranked

12 citations

Andrew Gregg, Molly Fox, Venu Lagishetty, Curt A. Sandman, Jonathan P. Jacobs +2 more

Variation in the Early Life and Adult Intestinal Microbiome of Intra-Uterine Growth Restricted Rat Offspring Exposed to a High Fat and Fructose Diet

Nutrients(2023)10.3390/nu15010217

N/A

0DataRank · unranked

5 citations

Shubhamoy Ghosh, Bo‐Chul Shin, Amit Ganguly, Venu Lagishetty, Jonathan P. Jacobs +2 more

Randomized controlled pilot study assessing fructose tolerance during fructose reintroduction in non‐constipated irritable bowel syndrome patients successfully treated with a low FODMAP diet

Neurogastroenterology & Motility(2023)10.1111/nmo.14575

N/A

0DataRank · unranked

5 citations

Lisa Lin, Swapna Mahurkar‐Joshi, Jonathan P. Jacobs, Venu Lagishetty, Nancee Jaffe +5 more

Diet and the gut microbiome in patients with Parkinson’s disease

npj Parkinson s Disease(2024)10.1038/s41531-024-00681-7

N/A

0DataRank · unranked

73 citations

Keren Zhang, Kimberly C. Paul, Aline Duarte Folle, Irish Del Rosario, Jonathan P. Jacobs +4 more

Subchronic inhalation exposure to ultrafine particulate matter alters the intestinal microbiome in various mouse models

Environmental Research(2024)10.1016/j.envres.2024.118242

N/A

0DataRank · unranked

15 citations

Rajat Gupta, Farzaneh Sedighian, Allen Louie, David H. Gonzalez, Collin Le +14 more

Ambient long-term exposure to organophosphorus pesticides and the human gut microbiome: an observational study

Environmental Health(2024)10.1186/s12940-024-01078-y

N/A

0DataRank · unranked

11 citations

Kimberly C. Paul, Jonathan P. Jacobs, Myles Cockburn, Jeff M. Bronstein, Irish Del Rosario +2 more

Prevotella Is Associated With Sex-Based Differences in Irritable Bowel Syndrome

Gastroenterology(2024)10.1053/j.gastro.2024.07.006

N/A

0DataRank · unranked

10 citations

K. B. Peters, Arpana Gupta, Jonathan P. Jacobs, Swapna Mahurkar-Joshi, Cathy Liu +6 more

Bariatric-induced microbiome changes alter MASLD development in association with changes in the innate immune system

Frontiers in Microbiology(2024)10.3389/fmicb.2024.1407555

N/A

0DataRank · unranked

10 citations

William Katzka, Julianne C. Yang, Candace Chang, Nerea Arias-Jayo, Venu Lagishetty +14 more

Treatment for Rheumatoid Arthritis Associated With Alterations in the Gastrointestinal Microbiota

ACR Open Rheumatology(2024)10.1002/acr2.11673

N/A

0DataRank · unranked

8 citations

Tor Olofsson, Venu Lagishetty, Zaid Alrawi, Eline S. Klaassens, Savanne Holster +5 more

Brain serotonin and serotonin transporter expression in male and female postnatal rat offspring in response to perturbed early life dietary exposures

Frontiers in Neuroscience(2024)10.3389/fnins.2024.1363094

N/A

0DataRank · unranked

6 citations

Shubhamoy Ghosh, Bo‐Chul Shin, Amit Ganguly, Liesbeth V. Maggiotto, Jonathan P. Jacobs +2 more

Ambient Particulate Matter Induces In Vitro Toxicity to Intestinal Epithelial Cells without Exacerbating Acute Colitis Induced by Dextran Sodium Sulfate or 2,4,6-Trinitrobenzenesulfonic Acid

International Journal of Molecular Sciences(2024)10.3390/ijms25137184

N/A

0DataRank · unranked

2 citations

Allen Louie, Yi Zhou, Rajat Gupta, Fengting Liang, Georgina Xanthou +15 more

Relationships between tryptophan-related gut metabolites, brain activity, and autism symptomatology

Research Square(2024)10.21203/rs.3.rs-4559624/v1

N/A

0DataRank · unranked

1 citations

Sofronia M Ringold, Aditya Jayashankar, Emily Kilroy, Christiana Butera, Jonathan P. Jacobs +6 more

Relationships between brain activity, tryptophan-related gut metabolites, and autism symptomatology

Nature Communications(2025)10.1038/s41467-025-58459-1

N/A

0DataRank · unranked

39 citations

Sofronia M Ringold, Aditya Jayashankar, Emily Kilroy, Christiana Butera, Jonathan P. Jacobs +7 more

Citrulline Inhibits Clostridioides difficile Infection With Anti-inflammatory Effects

Cellular and Molecular Gastroenterology and Hepatology(2025)10.1016/j.jcmgh.2025.101474

N/A

0DataRank · unranked

9 citations

Sophie Irwin, Becca Nelson, M Daelen, Lindsey Fontenot, Jonathan P. Jacobs +5 more

Mass spectrometric profiling of primary estrogens and estrogen metabolites in human stool and plasma partially elucidates the role of the gut microbiome in estrogen recycling

Molecular and Cellular Endocrinology(2025)10.1016/j.mce.2025.112534

N/A

0DataRank · unranked

6 citations

Tien S. Dong, Diana Funes, Laura L. Hernandez, Nicole R. Kushnir, Devika Nair +6 more

Diesel exhaust induces gut microbiome dysbiosis and reduced fecal acetate: Role of acetate supplementation

Ecotoxicology and Environmental Safety(2025)10.1016/j.ecoenv.2025.118654

N/A

0DataRank · unranked

4 citations

Candace Chang, Laurent Vergnes, Dawoud Sulaiman, Fen Yin, James A. Stewart +8 more

Differential brainstem connectivity according to sex and menopausal status in healthy male and female individuals

Biology of Sex Differences(2025)10.1186/s13293-025-00709-4

N/A

0DataRank · unranked

3 citations

Arpana Church, David Meriwether, Swapna Mahurkar‐Joshi, Vince W Li, Jessica Sohn +8 more

Extraintestinal Symptoms in Irritable Bowel Syndrome Are Associated With Stress Reactivity and the Gut Microbiome in a Sex-dependent Manner

Clinical Gastroenterology and Hepatology(2025)10.1016/j.cgh.2025.07.026

N/A

0DataRank · unranked

1 citations

Jennifer S. Labus, Tien S. Dong, Andrea Shin, Arpana Church, Swapna Mahurkar-Joshi +6 more

Ultra-processed food intake is associated with increased gastrointestinal tract symptoms and alterations in gut microbiota in patients with systemic sclerosis

Frontiers in Immunology(2025)10.3389/fimmu.2025.1610360

N/A

0DataRank · unranked

1 citations

Swapna Mahurkar-Joshi, Arissa Young, Jennifer S. Labus, B H He, Ezinne Aja +3 more

Ultrafine particulate matter exposure induces gut microbiota dysbiosis together with ER stress in the liver and worsened atherosclerosis

Environment International(2025)10.1016/j.envint.2025.109964

N/A

0DataRank · unranked

1 citations

Candace Chang, David H. Gonzalez, P K Srivastava, Collin Le, Daniel P. Stefanko +9 more

International Investigation of the Gut‐Lung Axis in Systemic Sclerosis–Interstitial Lung Disease

Arthritis Care & Research(2025)10.1002/acr.25623

N/A

0DataRank · unranked

3 citations

Arissa Young, Swapna Joshi, Jennifer S. Labus, Andrea Hsiu Ling Low, Vanessa Smith +11 more

Inflammatory disease microbiomes share a functional pathogenicity predicted by C-reactive protein

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.01.14.633015

N/A

0DataRank · unranked

0 citations

Lorenza Bartu, Ilaria Mogno, Alice Chen-Liaw, Tamar Plitt, Drew Helmus +22 more

Reply

Arthritis Care & Research(2025)10.1002/acr.25667

N/A

0DataRank · unranked

0 citations

Jennifer S. Labus, Arissa Young, Swapna Joshi, Jonathan P. Jacobs, Elizabeth R. Volkmann +3 more

The Current Landscape of Microbial Biomarkers in Gastrointestinal Disease

Gastroenterology Clinics of North America(2025)10.1016/j.gtc.2025.10.003

N/A

0DataRank · unranked

0 citations

Matthew Y. Zhao, Christine Lam, Jonathan P. Jacobs, Sohn G. Kim

A Microbial Signature Identifies Advanced Fibrosis in Patients with Chronic Liver Disease Mainly Due to NAFLD

Scientific Reports(2020)10.1038/s41598-020-59535-w

N/A

0DataRank · unranked

77 citations

William Katzka, Venu Lagishetty, Kayti Luu, Meg Hauer, Joseph R. Pisegna +2 more

Longitudinal Characterisation of the Gastrointestinal Tract Microbiome in Systemic Sclerosis

European Medical Journal(2020)10.33590/emj/20-00043

N/A

0DataRank · unranked

13 citations

Anna‐Maria Hoffmann‐Vold, Yu‐Ling Chang, Venu Lagishetty, Philip J. Clements, Øyvind Midtvedt +4 more

Shifts in microbial diversity, composition, and functionality in the gut and genital microbiome during a natural SIV infection in vervet monkeys

Microbiome(2020)10.1186/s40168-020-00928-4

N/A

0DataRank · unranked

18 citations

Tien S. Dong, Venu Lagishetty, William Katzka, Jonathan P. Jacobs, Christopher A. Schmitt +9 more

Understanding the Heterogeneity of Obesity and the Relationship to the Brain-Gut Axis

Nutrients(2020)10.3390/nu12123701

N/A

0DataRank · unranked

16 citations

Tien S. Dong, Zixi Chen, David Elashoff, Janet S. Sinsheimer, Jonathan P. Jacobs +6 more

Improvement in Uncontrolled Eating Behavior after Laparoscopic Sleeve Gastrectomy Is Associated with Alterations in the Brain–Gut–Microbiome Axis in Obese Women

Nutrients(2020)10.3390/nu12102924

N/A

0DataRank · unranked

41 citations

Arpana Gupta, Jonathan P. Jacobs, Venu Lagishetty, Elizabeth Gallagher, Ravi R. Bhatt +9 more

Jonathan P. Jacobs

Indexed papers

Top data-sharing exemplar

Papers