Jaclyn N. Taroni

Also affiliated with Alexion Pharma (Switzerland)

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 2%percentile

2.2Author DataRank

Indexed papers

37in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 37 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

OpenPBTA: The Open Pediatric Brain Tumor Atlas

Cell Genomics(2023)10.1016/j.xgen.2023.100340

Top 16%

1.3DataRank

Top 16%62 citations

Krutika S. Gaonkar, Stephanie J. Spielman, Candace L. Savonen, Chanté J. Bethell, Run Jin +61 more

Papers

Driven by 55 papers — median percentile 0. Top paper: “Metabolic pathways and immunometabolism in rare kidney diseases”.

Metabolic pathways and immunometabolism in rare kidney diseases

Annals of the Rheumatic Diseases(2018)10.1136/annrheumdis-2017-212935

N/A

5.5DataRank · unranked

186 citations

Sean Eddy, Jaclyn N. Taroni, Yaíma L. Lightfoot, Laura Mariani, Hemang Parikh +9 more

MultiPLIER: A Transfer Learning Framework for Transcriptomics Reveals Systemic Features of Rare Disease

Cell Systems(2019)10.1016/j.cels.2019.04.003

N/A

4.7DataRank · unranked

138 citations

Peter C. Grayson, Qiwen Hu, Sean Eddy, Matthias Kretzler, Peter A. Merkel +2 more

Machine learning in rare disease

Nature Methods(2023)10.1038/s41592-023-01886-z

N/A

2.4DataRank · unranked

113 citations

Jaclyn N. Taroni, Robert J. Allaway, Deepashree Venkatesh Prasad, Gustavo Stolovitzky, Casey S. Greene +1 more

A Multimodal Strategy Used by a Large c-di-GMP Network

Journal of Bacteriology(2018)10.1128/jb.00703-17

N/A

1.8DataRank · unranked

67 citations

Alan J. Collins, Georgia Doing, Jaclyn N. Taroni, Timothy J. Gauvin, Casey S. Greene +3 more

OpenPBTA: The Open Pediatric Brain Tumor Atlas

Cell Genomics(2023)10.1016/j.xgen.2023.100340

Top 16%

1.3DataRank

Top 16%62 citations

Krutika S. Gaonkar, Stephanie J. Spielman, Candace L. Savonen, Chanté J. Bethell, Run Jin +61 more

Systems Level Analysis of Systemic Sclerosis Shows a Network of Immune and Profibrotic Pathways Connected with Genetic Polymorphisms

PLoS Computational Biology(2015)10.1371/journal.pcbi.1004005

N/A

0.755DataRank · unranked

152 citations

Jaclyn N. Taroni, Viktor Martyanov, Casey S. Greene, Patricia A. Pioli, Michael L. Whitfield +3 more

Integrative Analysis Identifies Candidate Tumor Microenvironment and Intracellular Signaling Pathways that Define Tumor Heterogeneity in NF1

Genes(2020)10.3390/genes11020226

N/A

0.751DataRank · unranked

21 citations

Robert J. Allaway, Jaclyn N. Taroni, Aaron Baker, Xiaochun Zhang, Chang In Moon +7 more

Integrative Networks Illuminate Biological Factors Underlying Gene–Disease Associations

Current Genetic Medicine Reports(2016)10.1007/s40142-016-0102-5

N/A

0.681DataRank · unranked

9 citations

Jaclyn N. Taroni, Casey S. Greene, Krishnan, Arjun

Cross-platform normalization enables machine learning model training on microarray and RNA-seq data simultaneously

Communications Biology(2023)10.1038/s42003-023-04588-6

N/A

0.593DataRank · unranked

51 citations

Casey S. Greene, Jaclyn N. Taroni, Steven M. Foltz

Macrophages in SHH subgroup medulloblastoma display dynamic heterogeneity that varies with treatment modality

Cell Reports(2021)10.1016/j.celrep.2021.108917

N/A

0.571DataRank · unranked

44 citations

Michael V. Gonzalez, Krutika S. Gaonkar, Komal S. Rathi, Patricia Young, Sherjeel Arif +19 more

GenomicSuperSignature facilitates interpretation of RNA-seq experiments through robust, efficient comparison to public databases

Nature Communications(2022)10.1038/s41467-022-31411-3

N/A

0.523DataRank · unranked

14 citations

Ludwig Geistlinger, Marcel Ramos, Daniel Blankenberg, Marius van den Beek, Jaclyn N. Taroni +5 more

Ten simple rules for large-scale data processing

PLoS Computational Biology(2022)10.1371/journal.pcbi.1009757

N/A

0.441DataRank · unranked

8 citations

Alexandra J. Lee, Jaclyn N. Taroni, K. Wheeler, Chen-Shan Chin, Sean Davis +2 more

annoFuse: an R Package to annotate, prioritize, and interactively explore putative oncogenic RNA fusions

BMC Bioinformatics(2020)10.1186/s12859-020-03922-7

N/A

0.425DataRank · unranked

16 citations

Fédérico Marini, Komal S. Rathi, Payal Jain, Yuankun Zhu, Nicholas A. Chimicles +11 more

The Single-cell Pediatric Cancer Atlas: Data portal and open-source tools for single-cell transcriptomics of pediatric tumors

(2024)10.1101/2024.04.19.590243

Top 48%

0.373DataRank

Top 48%11 citations

Joshua A. Shapiro, Stephanie J. Spielman, David S. Mejia, Deepashree Venkatesh Prasad, Nozomi Ichihara +9 more

OpenPBTA: An Open Pediatric Brain Tumor Atlas

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.09.13.507832

Top 49%

0.363DataRank

Top 49%7 citations

Krutika S. Gaonkar, Candace L. Savonen, Stephanie J. Spielman, Chanté J. Bethell, Run Jin +59 more

Integrative analysis identifies candidate tumor microenvironment and intracellular signaling pathways that define tumor heterogeneity in NF1

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.13.904771

N/A

0.344DataRank · unranked

6 citations

Robert J. Allaway, Jaclyn N. Taroni, Aaron Baker, Xiaochun Zhang, Chang In Moon +7 more

Cross-Platform Normalization Enables Machine Learning Model Training On Microarray And RNA-Seq Data Simultaneously

bioRxiv (Cold Spring Harbor Laboratory)(2017)10.1101/118349

N/A

0.292DataRank · unranked

6 citations

Casey S. Greene, Jaclyn N. Taroni

Inflammatory and JAK-STAT Pathways as Shared Molecular Targets for ANCA-Associated Vasculitis and Nephrotic Syndrome

bioRxiv (Cold Spring Harbor Laboratory)(2018)10.1101/427898

N/A

0.269DataRank · unranked

5 citations

Viji Nair, Laura H. Mariani, Felix H. Eichinger, John Hartman, Huateng Huang +17 more

PSB 2019 Workshop on Text Mining and Visualization for Precision Medicine

Biocomputing 2019(2018)10.1142/9789813279827_0042

N/A

0.104DataRank · unranked

1 citations

ZHIYONG LU, Robert Leaman, Davy Weissenbacher, Mary Regina Boland, Yong Chen +14 more

GenomicSuperSignature: interpretation of RNA-seq experiments through robust, efficient comparison to public databases

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.26.445900

Top 78%

0.104DataRank

Top 78%1 citations

Ludwig Geistlinger, Marcel Ramos, Daniel Blankenberg, Marius van den Beek, Jaclyn N. Taroni +5 more

Single-cell transcriptomic profile reveals macrophage heterogeneity in medulloblastoma and their treatment-dependent recruitment

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.02.12.945642

N/A

0.104DataRank · unranked

1 citations

Michael Gonzalez, Krutika S. Gaonkar, Komal S. Rathi, Patricia Young, Sherjeel Arif +17 more

Data underlying OpenPBTA Manuscript Figures and Molecular Alterations

Zenodo (CERN European Organization for Nuclear Research)(2023)10.5281/zenodo.7805407

Top 78%

0.104DataRank

Top 78%1 citations

Krutika S. Gaonkar, Stephanie J. Spielman, Candace L. Savonen, Chanté J. Bethell, Run Jin +63 more

Integrative networks illuminate biological factors underlying gene-disease associations

bioRxiv (Cold Spring Harbor Laboratory)(2016)10.1101/062695

N/A

0.104DataRank · unranked

1 citations

Jaclyn N. Taroni, Casey S. Greene, Krishnan, Arjun

OMIC-14. OPENPBTA: AN OPEN PEDIATRIC BRAIN TUMOR ATLAS

Neuro-Oncology(2021)10.1093/neuonc/noab090.161

N/A

0.104DataRank · unranked

1 citations

Candace L. Savonen, Yuankun Zhu, Miguel A. Brown, Nhat Duong, Nighat Noureen +37 more

Additional file 8: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d31

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

"Cross-platform normalization enables analysis of microarray and RNA-seq data simultaneously" - Fileset

Figshare(2017)10.6084/m9.figshare.5035997

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Jaclyn N. Taroni

Additional file 3: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d26

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 13: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d4

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 18: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d9

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 9: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d32

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 32: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d25

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 7: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d30

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Expression Data From "A Novel Multi-Network Approach Reveals Tissue-Specific Cellular Modulators Of Fibrosis In Systemic Sclerosis, Pulmonary Fibrosis, And Pulmonary Arterial Hypertension"

Zenodo (CERN European Organization for Nuclear Research)(2016)10.5281/zenodo.216614

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 14: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d5

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 21: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d13

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 16: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d7

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 27: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d19

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 19: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d10

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 25: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d17

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Data underlying OpenPBTA Manuscript Figures and Molecular Alterations

Zenodo (CERN European Organization for Nuclear Research)(2023)10.5281/zenodo.7805408

Top 100%

0DataRank

Top 100%0 citations

Krutika S. Gaonkar, Stephanie J. Spielman, Candace L. Savonen, Chanté J. Bethell, Run Jin +63 more

Additional file 26: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d18

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 17: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d8

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

MultiPLIER Fileset

Figshare(2018)10.6084/m9.figshare.6982919

Top 100%

0DataRank

Top 100%0 citations

Qiwen Hu, Casey S. Greene, Jaclyn N. Taroni

Additional file 2: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d22

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 31: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d24

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Data underlying OpenPBTA Manuscript Figures and Molecular Alterations

Zenodo (CERN European Organization for Nuclear Research)(2023)10.5281/zenodo.7877739

Top 100%

0DataRank

Top 100%0 citations

Krutika S. Gaonkar, Stephanie J. Spielman, Candace L. Savonen, Chanté J. Bethell, Run Jin +63 more

Breast Cancer Tgca Microarray And Rna-Seq Data For Rna-Seq Titration Project

Zenodo (CERN European Organization for Nuclear Research)(2016)10.5281/zenodo.58862

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Jaclyn N. Taroni

Additional file 24: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d16

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 28: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d20

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 15: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d6

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 6: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d29

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 20: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d12

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

Additional file 11: of A novel multi-network approach reveals tissue-specific cellular modulators of fibrosis in systemic sclerosis

Figshare(2017)10.6084/m9.figshare.c.3723766_d2

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Viktor Martyanov, Tammara Wood, Romy Christmann, Harrison W. Farber +7 more

MultiPLIER Fileset

Figshare(2018)10.6084/m9.figshare.6982919.v1

Top 100%

0DataRank

Top 100%0 citations

Qiwen Hu, Casey S. Greene, Jaclyn N. Taroni

"Cross-platform normalization enables analysis of microarray and RNA-seq data simultaneously" - Fileset

Figshare(2017)10.6084/m9.figshare.5035997.v1

Top 100%

0DataRank

Top 100%0 citations

Casey S. Greene, Jaclyn N. Taroni

Jaclyn N. Taroni

Indexed papers

Top data-sharing exemplar

Papers