Michael DeGiorgio

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 40 papers. Top paper: “VolcanoFinder: Genomic scans for adaptive introgression”.

VolcanoFinder: Genomic scans for adaptive introgression

PLoS Genetics(2020)10.1371/journal.pgen.1008867

N/A

2.3DataRank · unranked

112 citations

Sylvain Mousset, Xiaoheng Cheng, Rasmus Nielsen, Michael DeGiorgio, Joachim Hermisson +1 more

Uncovering Footprints of Natural Selection Through Spectral Analysis of Genomic Summary Statistics

Molecular Biology and Evolution(2023)10.1093/molbev/msad157

N/A

0.643DataRank · unranked

26 citations

Md Ruhul Amin, Michael DeGiorgio, Sandipan Paul Arnab

Selection and thermostability suggest G-quadruplexes are novel functional elements of the human genome

Genome Research(2021)10.1101/gr.269589.120

N/A

0.578DataRank · unranked

46 citations

Michael DeGiorgio, Xiaoheng Cheng, Francesca Chiaromonte, Kristin A. Eckert, Yi-Fei Huang +2 more

Ampliconic Genes on the Great Ape Y Chromosomes: Rapid Evolution of Copy Number but Conservation of Expression Levels

Genome Biology and Evolution(2020)10.1093/gbe/evaa088

N/A

0.529DataRank · unranked

33 citations

Marta Tomaszkiewicz, Oliver A. Ryder, Rebeca Campos-Sánchez, Paul Medvedev, Michael DeGiorgio +2 more

Maximum Likelihood Estimation of Species Trees from Gene Trees in the Presence of Ancestral Population Structure

Genome Biology and Evolution(2020)10.1093/gbe/evaa022

N/A

0.480DataRank · unranked

7 citations

Michael DeGiorgio, Hillary Koch

Efficient Detection and Characterization of Targets of Natural Selection Using Transfer Learning

Molecular Biology and Evolution(2025)10.1093/molbev/msaf094

N/A

0.443DataRank · unranked

13 citations

André Luiz Campelo dos Santos, Matteo Fumagalli, Michael DeGiorgio, Sandipan Paul Arnab

Robust Phylogenetic Regression

Systematic Biology(2023)10.1093/sysbio/syad070

N/A

0.425DataRank · unranked

16 citations

Zoe Cain, Raquel Assis, Michael DeGiorgio, Richard H. Adams

Digital Image Processing to Detect Adaptive Evolution

Molecular Biology and Evolution(2024)10.1093/molbev/msae242

N/A

0.360DataRank · unranked

10 citations

Mahmudul Hasan, Michael DeGiorgio, Md Ruhul Amin

Of Traits and Trees: Probabilistic Distances under Continuous Trait Models for Dissecting the Interplay among Phylogeny, Model, and Data

Systematic Biology(2021)10.1093/sysbio/syab009

N/A

0.341DataRank · unranked

7 citations

Heath Blackmon, Michael DeGiorgio, Richard H. Adams

Predicting Gene Expression Divergence between Single-Copy Orthologs in Two Species

Genome Biology and Evolution(2023)10.1093/gbe/evad078

N/A

0.330DataRank · unranked

8 citations

Michael DeGiorgio, Raquel Assis, Antara Anika Piya

Properties and unbiased estimation of F - and D -statistics in samples containing related and inbred individuals

Genetics(2021)10.1093/genetics/iyab090

N/A

0.292DataRank · unranked

6 citations

Michael DeGiorgio, Mehreen R. Mughal

Robust phylogenetic regression

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.08.26.505424

N/A

0.292DataRank · unranked

6 citations

Zoe Cain, Raquel Assis, Michael DeGiorgio, Richard H. Adams

Robust regression rescues poor phylogenetic decisions

BMC Ecology and Evolution(2025)10.1186/s12862-025-02451-2

N/A

0.208DataRank · unranked

3 citations

Michael DeGiorgio, Raquel Assis, Richard H. Adams, Mataya Duncan

Predicting evolutionary targets and parameters of gene deletion from expression data

Bioinformatics Advances(2024)10.1093/bioadv/vbae002

N/A

0.208DataRank · unranked

3 citations

Michael DeGiorgio, Raquel Assis, André Luiz Campelo dos Santos

Uncovering footprints of natural selection through time-frequency analysis of genomic summary statistics

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.05.510997

N/A

0DataRank · unranked

2 citations

Md Ruhul Amin, Michael DeGiorgio, Sandipan Paul Arnab

Genomic evidence for ancient migration routes along South America’s Atlantic coast

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.06.27.497820

N/A

0DataRank · unranked

1 citations

Amanda C. Owings, Henry Sócrates Lavalle Sullasi, Ömer Gökçümen, Michael DeGiorgio, John Lindo +1 more

Predicting expression divergence and its evolutionary parameters between single-copy genes in two species

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.07.13.499803

N/A

0DataRank · unranked

0 citations

Michael DeGiorgio, Raquel Assis, Antara Anika Piya

Genomic evidence for adaptation to tuberculosis in the Andes before European contact

iScience(2023)10.1016/j.isci.2023.106034

N/A

0DataRank · unranked

13 citations

Nicola Rambaldi Migliore, Anna Olivieri, Antonio Torroni, Amanda C. Owings, Michael DeGiorgio +6 more

Likelihood-Based Tests of Species Tree Hypotheses

Molecular Biology and Evolution(2023)10.1093/molbev/msad159

N/A

0DataRank · unranked

4 citations

Michael DeGiorgio, Richard H. Adams

Tensor Decomposition-based Feature Extraction and Classification to Detect Natural Selection from Genomic Data

Molecular Biology and Evolution(2023)10.1093/molbev/msad216

N/A

0DataRank · unranked

9 citations

Mahmudul Hasan, Sandipan Paul Arnab, Michael DeGiorgio, Md Ruhul Amin

Tensor decomposition based feature extraction and classification to detect natural selection from genomic data

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.03.27.527731

N/A

0DataRank · unranked

0 citations

Md. Mahmudul Hasan, Sandipan Paul Arnab, Michael DeGiorgio, Md Ruhul Amin

TraitTrainR: accelerating large-scale simulation under models of continuous trait evolution

Bioinformatics Advances(2024)10.1093/bioadv/vbae196

N/A

0DataRank · unranked

2 citations

Mataya Duncan, Duane D. McKenna, Todd A. Castoe, Michael DeGiorgio, Richard H. Adams +1 more

A Tale of Too Many Trees: A Conundrum for Phylogenetic Regression

Molecular Biology and Evolution(2025)10.1093/molbev/msaf032

N/A

0DataRank · unranked

9 citations

Jenniffer Roa Lozano, Mataya Duncan, Jack E. Green, Raquel Assis, Michael DeGiorgio +1 more

Genomic Anomaly Detection with Functional Data Analysis

Genes(2025)10.3390/genes16060710

N/A

0DataRank · unranked

1 citations

André Luiz Campelo dos Santos, Sandipan Paul Arnab, Michael DeGiorgio, Raquel Assis, Ria Kanjilal

Semi-supervised detection of natural selection with positive-unlabeled learning

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.08.15.670602

N/A

0DataRank · unranked

4 citations

André Luiz Campelo dos Santos, Matteo Fumagalli, Michael DeGiorgio, Sandipan Paul Arnab

Discriminating models of trait evolution

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.1101/2025.06.12.659377

N/A

0DataRank · unranked

0 citations

Michael DeGiorgio, Raquel Assis, Rich Adams, Jenniffer Roa Lozano

Genomic insights into ancestry and infectious disease in 17th-century colonial Brazil

bioRxiv (Cold Spring Harbor Laboratory)(2025)10.64898/2025.12.10.693243

N/A

0DataRank · unranked

0 citations

Caroline Dellinghausen Borges, Ana Lúcia do Nascimento Oliveira, Suely Luna, Cláudia Cunha, Alexsandra Maria de Siqueira +5 more

A Likelihood Approach for Uncovering Selective Sweep Signatures from Haplotype Data

Molecular Biology and Evolution(2020)10.1093/molbev/msaa115

N/A

0DataRank · unranked

58 citations

Michael DeGiorgio, Alexandre M. Harris

Flexible Mixture Model Approaches That Accommodate Footprint Size Variability for Robust Detection of Balancing Selection

Molecular Biology and Evolution(2020)10.1093/molbev/msaa134

N/A

0DataRank · unranked

47 citations

Michael DeGiorgio, Xiaoheng Cheng

Learning Retention Mechanisms and Evolutionary Parameters of Duplicate Genes from Their Expression Data

Molecular Biology and Evolution(2020)10.1093/molbev/msaa267

N/A

0DataRank · unranked

13 citations

Raquel Assis, Michael DeGiorgio

Learning the properties of adaptive regions with functional data analysis

PLoS Genetics(2020)10.1371/journal.pgen.1008896

N/A

0DataRank · unranked

31 citations

Hillary Koch, Jinguo Huang, Francesca Chiaromonte, Michael DeGiorgio, Mehreen R. Mughal

PhyloWGA: chromosome-aware phylogenetic interrogation of whole genome alignments

Bioinformatics(2020)10.1093/bioinformatics/btaa884

N/A

0DataRank · unranked

1 citations

Todd A. Castoe, Michael DeGiorgio, Richard H. Adams

Learning retention mechanisms and evolutionary parameters of duplicate genes from their expression data

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.06.19.162107

N/A

0DataRank · unranked

0 citations

Raquel Assis, Michael DeGiorgio

Properties and unbiased estimation of F - and D -statistics in samples containing related and inbred individuals

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.11.20.391367

N/A

0DataRank · unranked

0 citations

Michael DeGiorgio, Mehreen R. Mughal

BalLeRMix +: mixture model approaches for robust joint identification of both positive selection and long-term balancing selection

Bioinformatics(2021)10.1093/bioinformatics/btab720

N/A

0DataRank · unranked

16 citations

Michael DeGiorgio, Xiaoheng Cheng

A spatially aware likelihood test to detect sweeps from haplotype distributions

bioRxiv (Cold Spring Harbor Laboratory)(2021)10.1101/2021.05.12.443825

N/A

0DataRank · unranked

6 citations

Zachary A. Szpiech, Michael DeGiorgio

The roles of balancing selection and recombination in the evolution of rattlesnake venom

Nature Ecology & Evolution(2022)10.1038/s41559-022-01829-5

N/A

0DataRank · unranked

51 citations

Blair W. Perry, Richard H. Adams, Matthew L. Holding, Zachary L. Nikolakis, Siddharth S. Gopalan +7 more

A spatially aware likelihood test to detect sweeps from haplotype distributions

PLoS Genetics(2022)10.1371/journal.pgen.1010134

N/A

0DataRank · unranked

44 citations

Zachary A. Szpiech, Michael DeGiorgio

Genomic evidence for ancient human migration routes along South America's Atlantic coast

Proceedings of the Royal Society B Biological Sciences(2022)10.1098/rspb.2022.1078

N/A

0DataRank · unranked

21 citations

Amanda C. Owings, Henry Sócrates Lavalle Sullasi, Ömer Gökçümen, Michael DeGiorgio, John Lindo +1 more

Spatiotemporal fluctuations of population structure in the Americas revealed by a meta‐analysis of the first decade of archaeogenomes

American Journal of Biological Anthropology(2022)10.1002/ajpa.24673

N/A

0DataRank · unranked

1 citations

Henry Sócrates Lavalle Sullasi, Ömer Gökçümen, John Lindo, Michael DeGiorgio, André Luiz Campelo dos Santos