Souvik Sinha

Biochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 100%percentile

0Author DataRank

Indexed papers

0in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Papers

Driven by 11 papers. Top paper: “Unveiling the RNA-mediated allosteric activation discloses functional hotspots in CRISPR-Cas13a”.

Unveiling the RNA-mediated allosteric activation discloses functional hotspots in CRISPR-Cas13a

Nucleic Acids Research(2023)10.1093/nar/gkad1127

N/A

0.868DataRank · unranked

37 citations

Adrian M. Molina Vargas, Pablo Arantes, Amun C. Patel, Mitchell R. O’Connell, Giulia Palermo +1 more

Disruption of electrostatic contacts in the HNH nuclease from a thermophilic Cas9 rewires allosteric motions and enhances high-temperature DNA cleavage

The Journal of Chemical Physics(2022)10.1063/5.0128815

N/A

0.434DataRank · unranked

17 citations

Carmelissa Norbrun, Jinping Luo, Chinmai Pindi, Souvik Sinha, Alexandra M. D’Ordine +4 more

New design strategies for ultra-specific CRISPR-Cas13a-based RNA-diagnostic tools with single-nucleotide mismatch sensitivity

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.26.550755

N/A

0.345DataRank · unranked

9 citations

Raven M. Osborn, Souvik Sinha, Pablo R. Arantes, Amun C. Patel, Stephen Dewhurst +3 more

High-Fidelity, Hyper-Accurate, and Evolved Mutants Rewire Atomic Level Communication in CRISPR-Cas9

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.25.554853

N/A

0.208DataRank · unranked

3 citations

Souvik Sinha, Mohd Ahsan, Alexandra M. D’Ordine, G. Jogl, Giulia Palermo +2 more

Twisting and swiveling domain motions in Cas9 to recognize target DNA duplexes, make double-strand breaks, and release cleaved duplexes

Frontiers in Molecular Biosciences(2023)10.3389/fmolb.2022.1072733

N/A

0DataRank · unranked

22 citations

Pablo R. Arantes, Mohd Ahsan, Souvik Sinha, Gregory W. Kyro, Federica Maschietto +6 more

New design strategies for ultra-specific CRISPR-Cas13a-based RNA detection with single-nucleotide mismatch sensitivity

Nucleic Acids Research(2023)10.1093/nar/gkad1132

N/A

0DataRank · unranked

84 citations

Souvik Sinha, Raven M. Osborn, Pablo Arantes, Amun C. Patel, Stephen Dewhurst +5 more

RNA-mediated Allosteric Activation in CRISPR-Cas13a

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.07.27.550797

N/A

0DataRank · unranked

0 citations

Adrian M. Molina Vargas, Pablo Arantes, Amun C. Patel, Mitchell R. O’Connell, Giulia Palermo +1 more

Dimerization of the deaminase domain and locking interactions with Cas9 boost base editing efficiency in ABE8e

Nucleic Acids Research(2024)10.1093/nar/gkae1066

N/A

0DataRank · unranked

24 citations

Xiaoyu Chen, Souvik Sinha, Aakash Saha, Amun C. Patel, Matthew Sample +4 more

Graph theory approaches for molecular dynamics simulations

Quarterly Reviews of Biophysics(2024)10.1017/s0033583524000143

N/A

0DataRank · unranked

24 citations

Souvik Sinha, Giulia Palermo, Amun C. Patel

Unveiling Cas8 dynamics and regulation within a transposon-encoded Cascade–TniQ complex

Proceedings of the National Academy of Sciences(2025)10.1073/pnas.2422895122

N/A

0DataRank · unranked

7 citations

Souvik Sinha, Pablo R. Arantes, Giulia Palermo, Amun C. Patel

ParametrizANI: Fast, Accurate, and Free Parametrization for Small Molecules

ChemRxiv(2025)10.26434/chemrxiv-2025-m26n9

N/A

0DataRank · unranked

0 citations

Souvik Sinha, Giulia Palermo, Pablo Arantes