Sreeja Parameswaran

Cincinnati Children's Hospital Medical Center

MedicineBiochemistry, Genetics and Molecular Biology

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 7%percentile

0.111Author DataRank

Indexed papers

1in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 1 indexed paper attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

After the Infection: A Survey of Pathogens and Non-communicable Human Disease

medRxiv(2023)10.1101/2023.09.14.23295428

Top 72%

0.111DataRank

Top 72%1 citations

Daniel Schnell, Sreeja Parameswaran, Kevin Ernst, Shannon K. O’Connor, Nathan Salomonis +5 more

Papers

Driven by 40 papers — median percentile 28. Top paper: “Mechanisms of stearoyl CoA desaturase inhibitor sensitivity and acquired resistance in cancer”.

Mechanisms of stearoyl CoA desaturase inhibitor sensitivity and acquired resistance in cancer

Science Advances(2021)10.1126/sciadv.abd7459

N/A

2.2DataRank · unranked

65 citations

Nupur Dasgupta, Priyanka Arora, Kwangmin Choi, Mruniya V. Gawali, Nishtha Gupta +16 more

Global discovery of lupus genetic risk variant allelic enhancer activity

Nature Communications(2021)10.1038/s41467-021-21854-5

N/A

1.7DataRank · unranked

84 citations

Xiaoting Chen, Carmy Forney, Omer Donmez, Daniel Miller, Sreeja Parameswaran +11 more

Lineage tracing of nuclei in skeletal myofibers uncovers distinct transcripts and interplay between myonuclear populations

Nature Communications(2024)10.1038/s41467-024-53510-z

N/A

0.751DataRank · unranked

20 citations

Casey O. Swoboda, Fabian Montecino Morales, Cristofer Calvo, Michael J. Petrany, Sreeja Parameswaran +5 more

Human cytomegalovirus infection coopts chromatin organization to diminish TEAD1 transcription factor activity

eLife(2024)10.7554/elife.101578

N/A

0.176DataRank · unranked

2 citations

Sreeja Parameswaran, Matthew J. Beucler, Lee Edsall, Andrew VonHandorf, Audrey Crowther +19 more

After the Infection: A Survey of Pathogens and Non-communicable Human Disease

medRxiv(2023)10.1101/2023.09.14.23295428

Top 72%

0.111DataRank

Top 72%1 citations

Daniel Schnell, Sreeja Parameswaran, Kevin Ernst, Shannon K. O’Connor, Nathan Salomonis +5 more

Genome-wide epigenetic profiling and transcriptome analysis in pediatric Obstructive Sleep Apnea: A focus on Black female children

Heliyon(2024)10.1016/j.heliyon.2024.e40830

N/A

0.104DataRank · unranked

1 citations

Sreeja Parameswaran, Omer A. Donmez, Carmy Forney, Hope Rowden, Charles A. Moore +7 more

Meta-analysis of 208,370 East Asians identifies 113 genomic loci and yields new non-immune cell relevant biological insights for systemic lupus erythematosus

medRxiv(2020)10.1101/2020.08.22.20178939

N/A

0DataRank · unranked

1 citations

Kwangwoo Kim, Hiroyuki Suetsugu, So‐Young Bang, Leilei Wen, Masaru Koido +81 more

Epstein-Barr virus nuclear antigen 2 (EBNA2) extensively rewires the human chromatin landscape at autoimmune risk loci

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.04.15.043612

N/A

0DataRank · unranked

0 citations

Sreeja Parameswaran, Omer Donmez, Daniel Miller, Carmy Forney, Michael Lape +11 more

TOP1 inhibition therapy protects against SARS-CoV-2-induced lethal inflammation

Cell(2021)10.1016/j.cell.2021.03.051

N/A

0DataRank · unranked

123 citations

Bobo Wing-Yee Mok, Laura Campisi, Tristan X. Jordan, Soner Yildiz, Sreeja Parameswaran +48 more

IRF1 governs the differential interferon-stimulated gene responses in human monocytes and macrophages by regulating chromatin accessibility

Cell Reports(2021)10.1016/j.celrep.2021.108891

N/A

0DataRank · unranked

95 citations

Yajing Gao, Igor Dozmorov, Venkat S. Malladi, Irene Saha, Margaret M. McDaniel +11 more

Runx Transcription Factors in T Cells—What Is Beyond Thymic Development?

Frontiers in Immunology(2021)10.3389/fimmu.2021.701924

N/A

0DataRank · unranked

54 citations

Sreeja Parameswaran, Matthew T. Weirauch, Artem Barski, Svetlana Korinfskaya

Runx1 shapes the chromatin landscape via a cascade of direct and indirect targets

PLoS Genetics(2021)10.1371/journal.pgen.1009574

N/A

0DataRank · unranked

30 citations

Daniel Brissette, Sreeja Parameswaran, Mario Pujato, Rebekah Karns, Leah C. Kottyan +3 more

Epstein–Barr virus nuclear antigen 2 extensively rewires the human chromatin landscape at autoimmune risk loci

Genome Research(2021)10.1101/gr.264705.120

N/A

0DataRank · unranked

56 citations

Sreeja Parameswaran, Omer A. Donmez, Daniel Miller, Carmy Forney, Michael Lape +11 more

CASCADE: high-throughput characterization of regulatory complex binding altered by non-coding variants

Cell Genomics(2022)10.1016/j.xgen.2022.100098

N/A

0DataRank · unranked

14 citations

Heather Hook, Rose Zhao, Jessica L. Keenan, Ashley Penvose, Yemi Osayame +7 more

Epigenetic and transcriptional dysregulation in CD4+ T cells in patients with atopic dermatitis

PLoS Genetics(2022)10.1371/journal.pgen.1009973

N/A

0DataRank · unranked

15 citations

Sreeja Parameswaran, Carmy Forney, Lee Edsall, Daniel Miller, Rebekah Karns +14 more

β‐catenin cancer–enhancing genomic regions axis is involved in the development of fibrolamellar hepatocellular carcinoma

Hepatology Communications(2022)10.1002/hep4.2055

N/A

0DataRank · unranked

9 citations

Michael E. Johnston, Maria Prates Rivas, Ashley Cast, Meenasri Kumbaji, Margaret A. Hanlon +19 more

High-resolution promoter interaction analysis implicates genes involved in the activation of Type 3 Innate Lymphoid Cells in autoimmune disease risk

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.10.19.512842

N/A

0DataRank · unranked

5 citations

Helen Ray-Jones, Nora Lakes, Rachel A. Brown, Tareian Cazares, Owen Clay +30 more

maxATAC: genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks

bioRxiv (Cold Spring Harbor Laboratory)(2022)10.1101/2022.01.28.478235

N/A

0DataRank · unranked

3 citations

Faiz W. Rizvi, Balaji Iyer, Xiaoting Chen, Michael Kotliar, Anthony T. Bejjani +10 more

maxATAC: Genome-scale transcription-factor binding prediction from ATAC-seq with deep neural networks

PLoS Computational Biology(2023)10.1371/journal.pcbi.1010863

N/A

0DataRank · unranked

41 citations

Faiz W. Rizvi, Balaji Iyer, Xiaoting Chen, Michael Kotliar, Anthony T. Bejjani +10 more

Lineage tracing of newly accrued nuclei in skeletal myofibers uncovers distinct transcripts and interplay between nuclear populations

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.08.24.554609

N/A

0DataRank · unranked

3 citations

Casey O. Swoboda, Michael J. Petrany, Sreeja Parameswaran, Andrew VonHandorf, Matthew T. Weirauch +3 more

TET1 regulates responses to house dust mite by altering chromatin accessibility, DNA methylation, and gene expression in airway epithelial cells

Research Square(2023)10.21203/rs.3.rs-3726852/v1

N/A

0DataRank · unranked

2 citations

Sreeja Parameswaran, Lucy P. Cai, Sweeney Elston, Chi Hoa Pham, Artem Barski +3 more

The unique function of Runx1 in skeletal muscle differentiation and regeneration is mediated by an ETS interaction domain

bioRxiv (Cold Spring Harbor Laboratory)(2023)10.1101/2023.11.21.568117

N/A

0DataRank · unranked

0 citations

Konrad Thorner, Sreeja Parameswaran, Wei Wei, Chuyue Yu, Xinhua Lin +3 more

Systematic identification of genotype-dependent enhancer variants in eosinophilic esophagitis

The American Journal of Human Genetics(2024)10.1016/j.ajhg.2023.12.008

N/A

0DataRank · unranked

16 citations

Xiaoming Lu, Xiaoting Chen, Sreeja Parameswaran, Lee Edsall, Michael P. Trimarchi +10 more

The unique functions of Runx1 in skeletal muscle maintenance and regeneration are facilitated by an ETS interaction domain

Development(2024)10.1242/dev.202556

N/A

0DataRank · unranked

6 citations

Konrad Thorner, Sreeja Parameswaran, Wei Wei, Chuyue Yu, Xinhua Lin +3 more

Accessible chromatin maps of inflammatory bowel disease intestine nominate cell-type mediators of genetic disease risk

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.02.09.579678

N/A

0DataRank · unranked

4 citations

Zi Yang, Elizabeth Angerman, Erin Bonkowski, Ingrid Jurickova, Xiaoting Chen +11 more

Human cytomegalovirus infection coopts chromatin organization to diminish TEAD1 transcription factor activity

bioRxiv (Cold Spring Harbor Laboratory)(2024)10.1101/2024.04.12.588762

N/A

0DataRank · unranked

2 citations

Sreeja Parameswaran, Matthew J. Beucler, Lee Edsall, Andrew VonHandorf, Audrey Crowther +19 more

Reviewer #1 (Public review): Human cytomegalovirus infection coopts chromatin organization to diminish TEAD1 transcription factor activity

(2024)10.7554/elife.101578.1.sa1

N/A

0DataRank · unranked

0 citations

Sreeja Parameswaran, Matthew J Beucler, Lee E Edsall, Andrew VonHandorf, Audrey Crowther +15 more

Update on the genetics of allergic diseases

Journal of Allergy and Clinical Immunology(2025)10.1016/j.jaci.2025.03.012

N/A

0DataRank · unranked

20 citations

Sreeja Parameswaran, Ronald Allan M. Panganiban, Gregory Constantine, Matthew T. Weirauch, Leah C. Kottyan +1 more

A survey of pathogenic involvement in non-communicable human diseases

Communications Medicine(2025)10.1038/s43856-025-00956-x

N/A

0DataRank · unranked

6 citations

Dan Schnell, Sreeja Parameswaran, Kevin Ernst, Shannon K. O’Connor, Nathan Salomonis +5 more

Silencing TET1 expression alters the epigenomic landscape and amplifies transcriptomic responses to allergen in airway epithelial cells

Current Zoology(2025)10.1093/eep/dvaf007

N/A

0DataRank · unranked

1 citations

Sreeja Parameswaran, Lucy P. Cai, Sweeney Elston, Chi Hoa Pham, Artem Barski +3 more

Genome-wide discovery of multiple sclerosis genetic risk variant allelic regulatory activity

G3 Genes Genomes Genetics(2025)10.1093/g3journal/jkaf192

N/A

0DataRank · unranked

0 citations

Lois Parks, Molly Shook, Carmy Forney, Xiaoting Chen, Lee Edsall +8 more

Massively parallel analysis of genotype-dependent enhancer activity among atopic dermatitis genetic risk variants

Journal of Allergy and Clinical Immunology(2025)10.1016/j.jaci.2025.07.032

N/A

0DataRank · unranked

0 citations

Xiaoming Lu, Xiaoting Chen, Lee Edsall, Marissa Granitto, Samuel J. Virolainen +14 more

Human cytomegalovirus infection coopts chromatin organization to diminish TEAD1 transcription factor activity

eLife(2025)10.7554/elife.101578.2

N/A

0DataRank · unranked

0 citations

Sreeja Parameswaran, Matthew J. Beucler, Lee Edsall, Andrew VonHandorf, Audrey Crowther +19 more

Meta-analysis of 208370 East Asians identifies 113 susceptibility loci for systemic lupus erythematosus

Annals of the Rheumatic Diseases(2020)10.1136/annrheumdis-2020-219209

N/A

0DataRank · unranked

180 citations

Kwangwoo Kim, Hiroyuki Suetsugu, So‐Young Bang, Leilei Wen, Masaru Koido +82 more

Human cytomegalovirus infection coopts chromatin organization to diminish TEAD1 transcription factor activity

eLife(2025)10.7554/elife.101578.3

N/A

0DataRank · unranked

0 citations

Sreeja Parameswaran, Matthew J. Beucler, Lee Edsall, Andrew VonHandorf, Audrey Crowther +19 more

The genetic etiology of eosinophilic esophagitis

Journal of Allergy and Clinical Immunology(2020)10.1016/j.jaci.2019.11.013

N/A

0DataRank · unranked

93 citations

Sreeja Parameswaran, Matthew T. Weirauch, Marc E. Rothenberg, Lisa J. Martin, Leah C. Kottyan

Human Virus Transcriptional Regulators

Cell(2020)10.1016/j.cell.2020.06.023

N/A

0DataRank · unranked

89 citations

Ted Hong, Sreeja Parameswaran, Kevin Ernst, Ivan Marazzi, Matthew T. Weirauch +2 more

Comprehensive Review of Steroid-Sensitive Nephrotic Syndrome Genetic Risk Loci and Transcriptional Regulation as a Possible Mechanistic Link to Disease Risk

Kidney International Reports(2020)10.1016/j.ekir.2020.09.048

N/A

0DataRank · unranked

5 citations

Sreeja Parameswaran, Amy Eapen, Xiaoting Chen, John B. Harley, Prasad Devarajan +3 more

Topoisomerase 1 inhibition therapy protects against SARS-CoV-2-induced inflammation and death in animal models

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.12.01.404483

N/A

0DataRank · unranked

8 citations

Bobo Wing-Yee Mok, Laura Campisi, Tristan X. Jordan, Soner Yildiz, Sreeja Parameswaran +46 more

Genome-wide discovery of SLE genetic risk variant allelic enhancer activity

bioRxiv (Cold Spring Harbor Laboratory)(2020)10.1101/2020.01.20.906701

N/A

0DataRank · unranked

4 citations

Xiaoting Chen, Carmy Forney, Omer Donmez, Daniel Miller, Sreeja Parameswaran +11 more

Sreeja Parameswaran

Indexed papers

Top data-sharing exemplar

Papers