Lisa Bastarache

Vanderbilt University

Pilot corpus only

This score is computed over theSindex pilot corpus and does not cover the full scientific literature. Scores are relative to papers we have ingested — papers, authors, and institutions outside the pilot are not represented. Methodology.

Top 1%percentile

6.0Author DataRank

Indexed papers

7in pilot corpus

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Why this DataRank?

An author's DataRank is the sum of the DataRanks of all 7 indexed papers attributed to them. A prolific author with many moderate-impact papers can outrank one with a single high-impact paper.

Author scores recompute whenever paper DataRanks are refreshed, so this number lags the underlying paper scores by at most one batch run.

Read the full methodology →

The highest-impact dataset this researcher has shared, ranked by DataRank — the single contribution doing the most to lift their data-sharing standing.

PhenomeXcan: Mapping the genome to the phenome through the transcriptome

Science Advances(2020)10.1126/sciadv.aba2083

Top 7%

3.2DataRank

Top 7%135 citations

Padma Sheila Rajagopal, Alvaro N. Barbeira, Yanyu Liang, Owen Melia, Lisa Bastarache +4 more

Papers

Driven by 49 papers — median percentile 56. Top paper: “PhenomeXcan: Mapping the genome to the phenome through the transcriptome”.

PhenomeXcan: Mapping the genome to the phenome through the transcriptome

Science Advances(2020)10.1126/sciadv.aba2083

Top 7%

3.2DataRank

Top 7%135 citations

Padma Sheila Rajagopal, Alvaro N. Barbeira, Yanyu Liang, Owen Melia, Lisa Bastarache +4 more

Analysis of predicted loss-of-function variants in UK Biobank identifies variants protective for disease

Nature Communications(2018)10.1038/s41467-018-03911-8

N/A

3.1DataRank · unranked

104 citations

Amit V. Khera, Mark Chaffin, Derek Klarin, Pradeep Natarajan, Krishna Aragam +43 more

Next-generation phenotyping: introducing phecodeX for enhanced discovery research in medical phenomics

Bioinformatics(2023)10.1093/bioinformatics/btad655

Top 19%

1.1DataRank

Top 19%59 citations

William W. Stead, Ida Aka, April Barnado, Julie A. Bastarache, Elly Brokamp +22 more

Linking rare and common disease vocabularies by mapping between the human phenotype ontology and phecodes

JAMIA Open(2023)10.1093/jamiaopen/ooad007

Top 21%

0.981DataRank

Top 21%18 citations

Lisa Bastarache, John A. Capra, Evonne McArthur

Systematic replication of smoking disease associations using survey responses and EHR data in the All of Us Research Program

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad205

Top 44%

0.423DataRank

Top 44%7 citations

Lina Sulieman, Huan Mo, Jacob M. Keaton, Tracey M. Ferrara, Ariel Williams +11 more

Next-Generation Phenotyping: Introducing PhecodeX for Enhanced Discovery Research in Medical Phenomics

medRxiv(2023)10.1101/2023.06.18.23291088

Top 53%

0.320DataRank

Top 53%5 citations

William W. Stead, Ida Aka, AL Barnado, JA Bastarache, Elly Brokamp +22 more

Large-Scale Exome-wide Association Analysis Identifies Loci for White Blood Cell Traits and Pleiotropy with Immune-Mediated Diseases

UNC Libraries(2020)10.17615/s8sd-h432

Top 100%

0DataRank

Top 100%0 citations

Todd L. Edwards, Jin Li, John M. Starr, Eric Boerwinkle, Yingchang Lu +92 more

Multi-omic analysis elucidates the genetic basis of hydrocephalus

Cell Reports(2021)10.1016/j.celrep.2021.109085

N/A

0DataRank · unranked

44 citations

Lisa Bastarache, Diego M. Morales, John C. Wellons, David D. Limbrick, Eric R. Gamazon +1 more

The Role of Electronic Health Records in Advancing Genomic Medicine

Annual Review of Genomics and Human Genetics(2021)10.1146/annurev-genom-121120-125204

N/A

0DataRank · unranked

36 citations

Lisa Bastarache, Jacob J. Hughey, Josh F. Peterson, Jodell E. Linder

Commonalities across computational workflows for uncovering explanatory variants in undiagnosed cases

Genetics in Medicine(2021)10.1038/s41436-020-01084-8

N/A

0DataRank · unranked

34 citations

Dustin Baldridge, Matt Velinder, Joel B. Krier, Kimberly LeBlanc, Cecilia Esteves +90 more

Prostaglandin I2 signaling licenses Treg suppressive function and prevents pathogenic reprogramming

Journal of Clinical Investigation(2021)10.1172/jci140690

N/A

0DataRank · unranked

22 citations

Melissa H. Bloodworth, Shinji Toki, Jian Zhang, Weisong Zhou, Kelli L. Boyd +14 more

Phenotyping coronavirus disease 2019 during a global health pandemic: Lessons learned from the characterization of an early cohort

Journal of Biomedical Informatics(2021)10.1016/j.jbi.2021.103777

N/A

0DataRank · unranked

13 citations

Harris T. Bland, Melissa L McPheeters, Quinn S. Wells, Eric Farber‐Eger, Cosmin A. Bejan +8 more

Neptune: an environment for the delivery of genomic medicine

Genetics in Medicine(2021)10.1038/s41436-021-01230-w

N/A

0DataRank · unranked

8 citations

Victoria Yi, David R. Murdock, Sara E. Kalla, Tsung-Jung Wu, Aniko Sabo +93 more

A trans-ancestry genome-wide association study of unexplained chronic ALT elevation as a proxy for nonalcoholic fatty liver disease with histological and radiological validation

medRxiv(2021)10.1101/2020.12.26.20248491

N/A

0DataRank · unranked

16 citations

Shweta Ramdas, Kimberly Lorenz, Xiuqing Guo, Rebecca Darlay, Heather J. Cordell +85 more

Genome-wide association study reveals genetic risk factors for trigeminal neuralgia

medRxiv(2021)10.1101/2021.02.08.21251349

N/A

0DataRank · unranked

5 citations

Jing He, Oluwatoyin Akinnusotu, Rebecca L. Sale, Janey Wang, Lisa Bastarache +2 more

A multiancestry genome-wide association study of unexplained chronic ALT elevation as a proxy for nonalcoholic fatty liver disease with histological and radiological validation

Nature Genetics(2022)10.1038/s41588-022-01078-z

N/A

0DataRank · unranked

195 citations

Shweta Ramdas, Kimberly Lorenz, Xiuqing Guo, Rebecca Darlay, Heather J. Cordell +86 more

Cox regression is robust to inaccurate EHR-extracted event time: an application to EHR-based GWAS

Bioinformatics(2022)10.1093/bioinformatics/btac086

N/A

0DataRank · unranked

6 citations

Jacob J. Hughey, Lisa Bastarache, Joshua C. Denny, Qingxia Chen, Rebecca Irlmeier

Limited clinical utility for GWAS or polygenic risk score for postoperative acute kidney injury in non-cardiac surgery in European-ancestry patients

BMC Nephrology(2022)10.1186/s12882-022-02964-8

N/A

0DataRank · unranked

7 citations

Adam Lewis, Lisa Bastarache, Anita Pandit, Jing He, Anik Sinha +12 more

A research agenda to support the development and implementation of genomics-based clinical informatics tools and resources

Journal of the American Medical Informatics Association(2022)10.1093/jamia/ocac057

N/A

0DataRank · unranked

9 citations

Laura Findley, Madison P. Goldrich, Tejinder Rakhra-Burris, Ana Stevens, Pamela A. Williams +34 more

Medication history-wide association studies for pharmacovigilance of pregnant patients

Communications Medicine(2022)10.1038/s43856-022-00181-w

N/A

0DataRank · unranked

5 citations

Xinnan Niu, Etoi Garrison, Sara L. Van Driest, Lisa Bastarache, Ethan S. Lippmann +4 more

The contribution of mosaicism to genetic diseases and de novo pathogenic variants

American Journal of Medical Genetics Part A(2023)10.1002/ajmg.a.63309

N/A

0DataRank · unranked

19 citations

Lisa Bastarache, Kimberly Ezell, Shilpa N. Kobren, Cecilia Esteves, Jill A. Rosenfeld +10 more

Genetic and clinical determinants of telomere length

Human Genetics and Genomics Advances(2023)10.1016/j.xhgg.2023.100201

N/A

0DataRank · unranked

26 citations

Jing He, John E. Mayer, Luke Moat, Peter Gerstenberger, Reynor Wilhorn +9 more

Heterozygous rare variants in NR2F2 cause a recognizable multiple congenital anomaly syndrome with developmental delays

European Journal of Human Genetics(2023)10.1038/s41431-023-01434-5

N/A

0DataRank · unranked

25 citations

Leticia S. Matsuoka, Michael March, Dong Li, Elly Brokamp, Sara Benito‐Sanz +32 more

Human Immunodeficiency Virus Status, Tenofovir Exposure, and the Risk of Poor Coronavirus Disease 19 Outcomes: Real-World Analysis From 6 United States Cohorts Before Vaccine Rollout

Clinical Infectious Diseases(2023)10.1093/cid/ciad084

N/A

0DataRank · unranked

17 citations

Wendy A. Leyden, Oleg Sofrygin, Ben J. Marafino, Jacek Skarbinski, Sonia Napravnik +17 more

A test of automated use of electronic health records to aid in diagnosis of genetic disease

Genetics in Medicine(2023)10.1016/j.gim.2023.100966

N/A

0DataRank · unranked

7 citations

Lisa Bastarache, Chenjie Zeng, Sangwoo T. Han, Janey Wang, Jing He +2 more

Knowledgebase strategies to aid interpretation of clinical correlation research

Journal of the American Medical Informatics Association(2023)10.1093/jamia/ocad078

N/A

0DataRank · unranked

6 citations

Adam Lewis, Nunzia Bettinsoli Giuse, Taneya Y. Koonce, Lisa Bastarache, William W. Stead

Population genetic testing and SERPINA1 sequencing identifies unidentified alpha-1 antitrypsin deficiency alleles and gene-environment interaction with hepatitis C infection

PLoS ONE(2023)10.1371/journal.pone.0286469

N/A

0DataRank · unranked

1 citations

Lisa Bastarache, Janey Wang, Jing He, Sara L. Van Driest, Joshua C. Denny +1 more

Clinical consequences of a polygenic predisposition to benign lower white blood cell counts

medRxiv(2023)10.1101/2023.08.20.23294331

N/A

0DataRank · unranked

0 citations

John P. Shelley, Alyson L. Dickson, Jacy Zanussi, Laura L. Daniel, Neil S. Zheng +23 more

SARS-CoV-2 Testing and Positivity among Persons with and Without HIV in 6 US Cohorts

UNC Libraries(2023)10.17615/b066-4975

Top 100%

0DataRank

Top 100%0 citations

Jacek Skarbinski, Wendy A. Leyden, Carolyn Williams, Lisa Bastarache, K.N. Althoff +14 more

Identifying and Extracting Rare Diseases and Their Phenotypes with Large Language Models

Journal of Healthcare Informatics Research(2024)10.1007/s41666-023-00155-0

N/A

0DataRank · unranked

57 citations

Yan Hu, Lisa Bastarache, Alex Cheng, Rizwan Hamid, Paul A. Harris +2 more

Diagnostic delay in monogenic disease: A scoping review

Genetics in Medicine(2024)10.1016/j.gim.2024.101074

N/A

0DataRank · unranked

18 citations

Miles Fisher, Alex F. Gimeno, Kayce Gill, Camille Ivey, Josh F. Peterson +2 more

Clinical associations with a polygenic predisposition to benign lower white blood cell counts

Nature Communications(2024)10.1038/s41467-024-47804-5

N/A

0DataRank · unranked

7 citations

John P. Shelley, Alyson L. Dickson, Jacy Zanussi, Laura L. Daniel, Neil S. Zheng +23 more

Updating probability of pathogenicity for RYR1 and CACNA1S exon variants in individuals without malignant hyperthermia after exposure to triggering anesthetics

Pharmacogenetics and Genomics(2024)10.1097/fpc.0000000000000551

N/A

0DataRank · unranked

5 citations

Lisa Bastarache, Jing He, Adam Lewis, Ida Aka, Matthew S. Shotwell +5 more

Undiagnosed Disease Network collaborative approach in diagnosing rare disease in a patient with a mosaic CACNA1D variant

American Journal of Medical Genetics Part A(2024)10.1002/ajmg.a.63597

N/A

0DataRank · unranked

5 citations

Rory J. Tinker, Yutaka Furuta, Alican Gulsevin, Lisa Bastarache, Rizwan Hamid +8 more

Disentangling the phenotypic patterns of hypertension and chronic hypotension

Journal of Biomedical Informatics(2024)10.1016/j.jbi.2024.104743

N/A

0DataRank · unranked

1 citations

Adam Lewis, Nunzia Bettinsoli Giuse, Annette M. Williams, Italo Biaggioni, Lisa Bastarache +1 more

Overcome the Limitation of Phenome-Wide Association Studies (PheWAS): Extension of PheWAS to Efficient and Robust Large-Scale ICD Codes Analysis

medRxiv(2024)10.1101/2024.04.15.24305098

N/A

0DataRank · unranked

0 citations

Siwei Zhang, Tess Vessels, Lisa Bastarache, Cosmin A. Bejan, Ryan S Hsie +11 more

Host genetic effects in pneumonia

UNC Libraries(2024)10.17615/h7nb-a988

N/A

0DataRank · unranked

0 citations

Megan M. Shuey, Nancy J. Cox, Douglas M. Shaw, Jennifer E. Below, Xue Zhong +13 more

Expert-Based, Institutional Approaches for Reducing the Diagnostic Odyssey of Patients With Inborn Errors of Immunity

The Journal of Allergy and Clinical Immunology In Practice(2025)10.1016/j.jaip.2025.03.040

N/A

0DataRank · unranked

3 citations

Lisa Bastarache, John Anderson, Edward M. Behrens, Natalia S. Chaimowitz, Shanmuganathan Chandrakasan +5 more

Hypophosphatasia: low penetrance of pathogenic and likely-pathogenic ALPL variants identified through an unselected biorepository

Journal of Bone and Mineral Research(2025)10.1093/jbmr/zjaf176

N/A

0DataRank · unranked

3 citations

Jennifer E. Below, Jinyuan Liu, Amir Javid, Guancho Wang, Lisa Bastarache +1 more

A statistical framework for evaluating the repeatability and reproducibility of large language models

medRxiv(2025)10.1101/2025.08.06.25333170

N/A

0DataRank · unranked

14 citations

Boyu Ren, Chih-Yuan Hsu, Chao Yan, Rory J. Tinker, Thomas A. Cassini +7 more

Genome sequencing of 35,024 predominantly African ancestry persons addresses gaps in genomics and healthcare

medRxiv(2025)10.1101/2025.10.30.25338549

N/A

0DataRank · unranked

4 citations

Mojgan Babanejad, James Baker, Xavier Bledsoe, Freida Blostein, Robert W. Corty +26 more

Genetically determined alterations in inflammation and infection-associated genes are associated with hydrocephalus in patients of African Ancestry

medRxiv(2025)10.1101/2025.06.05.25329021

N/A

0DataRank · unranked

1 citations

Jing He, Lisa Bastarache, Albert M. Isaacs, Andrew T. Hale

Polygenic Variation Underlying Neutrophil Counts Modifies the Penetrance of Duffy‐Null Neutropenia

American Journal of Hematology(2025)10.1002/ajh.70144

N/A

0DataRank · unranked

0 citations

Mingjian Shi, Lisa Bastarache, Cecilia P. Chung, Jonathan D. Mosley, John P. Shelley

Common variant approaches to study Mendelian disease gene function identify novel phenome and pathways associated with PLOD3

medRxiv(2025)10.1101/2025.11.25.25340832

N/A

0DataRank · unranked

0 citations

James Baker, Freida Blostein, Megan M. Shuey, Dharmendra Choudhary, Ela W. Knapik +6 more

Electronic health record phenotypes associated with genetically regulated expression of CFTR and application to cystic fibrosis

Genetics in Medicine(2020)10.1038/s41436-020-0786-5

N/A

0DataRank · unranked

13 citations

Zhijun Yin, Gengjie Jia, Dan Zhou, Qiang Wei, Annika Faucon +8 more

Host genetic effects in pneumonia

The American Journal of Human Genetics(2020)10.1016/j.ajhg.2020.12.010

N/A

0DataRank · unranked

43 citations

Douglas M. Shaw, Lauren E. Petty, Misa Graff, Ryan J. Bohlender, Hannah G. Polikowsky +13 more

Phenome-wide association analysis suggests the APOL1 linked disease spectrum primarily drives kidney-specific pathways

Kidney International(2020)10.1016/j.kint.2020.01.027

N/A

0DataRank · unranked

28 citations

Andrea Ihegword, Chengxiang Qiu, Aeron Small, Wei‐Qi Wei, Lisa Bastarache +14 more

Hemochromatosis risk genotype is not associated with colorectal cancer or age at its diagnosis

Human Genetics and Genomics Advances(2020)10.1016/j.xhgg.2020.100010

N/A

0DataRank · unranked

5 citations

Xiaoliang Wang, Pierre Fontanillas, Esther Kim, Sirisak Chanprasert, Allan Gordon +55 more

The genetic architecture of human infectious diseases and pathogen-induced cellular phenotypes

medRxiv(2020)10.1101/2020.07.19.20157404

N/A

0DataRank · unranked

6 citations

Dan Zhou, Rebecca L. Sale, Lisa Bastarache, Liuyang Wang, Sandra S. Zinkel +4 more

Lisa Bastarache

Indexed papers

Top data-sharing exemplar

Papers