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ExCel: Super-Resolution Imaging of C. elegans with Expansion Microscopy

Methods in molecular biology(2022)10.1007/978-1-0716-2181-3_9Source: DataRank Database

ExCel: Super-Resolution Imaging of C. elegans with Expansion Microscopy is a research paper published in Methods in molecular biology (2022). On theSindex it has a DataRank of 0.446. It has been cited 11 times, with 11 citing works in its 1-hop citation network.

N/A

0.446DataRank · unranked

Scored on demand from live citation data

Open Access11 citations · 11 citing works in its network

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (15 grants)Impact (FWCI 4.94)OA: greenTopics (45)IDs (PubMed, PMC, OpenAlex)SDGs (1)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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DataRank Breakdown

Base Score 83%Citation Network 17%

Base Score Contribution

0.373

From this paper's citation signal

Citation Network Contribution

0.0738

From 6 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 11 citers.

Ultrastructure expansion microscopy (U‐ExM) of mouse and human kidneys for analysis of subcellular structures
Cytoskeleton202413 citations117 referencesContributes 0.023
Apoptosis and beyond: A new era for programmed cell death in Caenorhabditis elegans
Seminars in Cell and Developmental Biology20239 citations116 referencesContributes 0.020
A pilot study for whole proteome tagging in C. elegans
eLife20261 citations51 referencesContributes 0.014
Neural Circuit Remodeling: Mechanistic Insights from Invertebrates
Journal of Developmental Biology20244 citations125 referencesContributes 0.013
Ultrastructure expansion microscopy (U-ExM) of mouse and human kidneys for analysis of subcellular structures
bioRxiv (Cold Spring Harbor Laboratory)20243 citations113 referencesContributes 0.012

Authors (3)

Danielle M. Cosio ORCID,Edward S. Boyden ORCID,Chih-Chieh (Jay) Yu ORCID

Live enrichment

PubMed:35320565 PMC:PMC10194579 OpenAlex:https://openalex.org/W4221017426

NIMH NIH HHS

Grant: R01 MH110932

NIBIB NIH HHS

Grant: R01 EB024261

NIDA NIH HHS

Grant: R01 DA029639

NIMH NIH HHS

Grant: R01 MH114031

NIMH NIH HHS

Grant: R01 MH103910

NHGRI NIH HHS

Grant: RM1 HG008525

National Science Foundation

Grant: 1734870

NCS-FO: Collaborative Research: Ground-Truth Analysis and Modeling of Entire Individual C. elegans Nervous Systems

National Institutes of Health

Grant: 5R01MH114031-04

RNA Scaffolds for Cell Specific Multiplexed Neural Observation

National Institutes of Health

Grant: 5R01DA029639-04

Novel Platforms for Systematic Optical Control of Complex Neural Circuits In Vivo

National Institutes of Health

Grant: 2R01EB024261-05

Expansion Microscopy

National Institutes of Health

Grant: 5R01MH103910-03

Recording neural activities onto DNA

National Institutes of Health

Grant: 1RM1HG008525-01

Center for Genomically Engineered Organs

National Institutes of Health

Grant: 1R01MH110932-01

An Accessible Optical Toolbox for Saturated Nanoscale Analysis of Neural Architecture

Howard Hughes Medical Institute

FWCI

4.94

Citation Percentile

1.0%

Citation Trend

2023

2024

2026

greenLicense: cc-by

repositoryhttps://pmc.ncbi.nlm.nih.gov/articles/PMC10194579/pdf/nihms-1896819.pdf

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/10194579

book serieshttps://doi.org/10.1007/978-1-0716-2181-3_9

repositoryhttps://pubmed.ncbi.nlm.nih.gov/35320565

Fields of Study

Advanced Fluorescence Microscopy TechniquesGenetics, Aging, and Longevity in Model OrganismsPhotosynthetic Processes and Mechanisms0301 basic medicine0303 health sciences03 medical and health sciencesAnimalsCaenorhabditis elegansDNAMicroscopy, FluorescenceProteinsRNA

MeSH Terms

AnimalsDNAMicroscopy, FluorescenceProteinsRNACaenorhabditis elegans

Keywords

STED microscopyResolution (logic)AngstromCaenorhabditis elegansSuperresolutionComputer scienceComputational biologyComputer graphics (images)BiologyArtificial intelligenceChemistryImage (mathematics)CrystallographyGeneticsGeneImmunohistochemistryMolecular mappingin situ HybridizationC. ElegansSuper-resolution MicroscopyRna Expression AnalysisExpansion MicroscopyMicroscopy, FluorescenceAnimalsProteinsRNADNA

Sustainable Development Goals

SDG 0: Life below water