Transcriptional profile of the rat cardiovascular system at single-cell resolution is a dataset published in Cell Reports (2024). On theSindex it has a DataRank of 0.495, placing it in the top 38.7% of the data-sharing corpus. It has been cited 15 times, with 15 citing works in its 1-hop citation network. Its calibrated FAIR score is 67/100.
Ranks in the top 39% for downstream scientific impact
Linked data & code
DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?
FAIR checklist signals are shown for context only and do not affect DataRank scoring.
Full FAIR picture · advisory
The headline score is computed from the scored criteria — the fact-shaped checks (a repository, an accession, a licence) that two independent models agree on. The advisory criteria below are real FAIR guidance but rest on judgment calls that models read differently, so they inform without moving the number.
“GSE280111”
The paper provides a GEO accession, which is a persistent identifier scheme.
RDA-F1-01D — FAIR Data Maturity Model: 'Data is identified by a persistent identifier' (priorit · RDA-F1-02D — FAIR Data Maturity Model: 'Data is identified by a globally unique identifier' · FsF-F1-02D — F-UJI/FAIRsFAIR: 'Data is assigned a persistent identifier'
“Raw FASTQ and h5 count matrix snRNA-seq data have been deposited at GEO”
The paper names GEO, a recognised repository, as the holder of the data.
RDA-F4-01M — FAIR Data Maturity Model: metadata is offered so it can be harvested and indexed ( · NIH DMS Policy Element 4 (NOT-OD-21-014) — name the repository where data will be archived · NSTC Desirable Characteristics of Data Repositories (2022) — 'Long-Term Sustainability', 'Reten
“GSE280111”
The dataset identifier (GEO accession) appears only in the key resources table (body text), not in the reference list. [majority verdict 'partial' (4/5 passes agreed)]
FORCE11 Joint Declaration of Data Citation Principles (2014) — data should be cited as a first- · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes · FsF-F3-01M — F-UJI: 'Metadata includes the identifier of the data it describes'
Advisory · not in the published score
“Raw FASTQ and h5 count matrix snRNA-seq data have been deposited at GEO and are publicly available as of the date of publication. Processed, annotated AnnData h5ad data have been deposited at the Single Cell Portal and are publicly available as of the date of publication. Accession numbers are listed in the key resources table.”— not found in the paper; verdict downgraded
The statement points to named repositories (GEO, Single Cell Portal) with accessions, meeting Colavizza category 3. [downgraded to 'partial' — no verifiable quote from the paper] [majority verdict 'partial' (4/5 passes agreed)]
Colavizza, Hrynaszkiewicz, Staden, Whitaker & McGillivray (2020), 'The citation advantage of li · Springer Nature research data policy — Data Availability Statements: standard statement templat · RDA-F3-01M — metadata clearly and explicitly includes the identifier of the data it describes
“We collected 89 samples from 10 regions of the heart and major blood vessels: left ventricle (LV), right ventricle (RV), left atrium (LA), right atrium (RA), septum (base and apex), atrioventricular node (AVN), sinoatrial node (SAN), pulmonary vein (PV), pulmonary artery (PA), and aorta (Ao) (Figure 1A).”— not found in the paper; verdict downgraded
The dataset's content (samples, regions, nuclei count) is described in running prose; there is no itemised inventory or section heading for the data files. [downgraded to 'no' — no verifiable quote from the paper] [majority verdict 'no' (3/5 passes agreed)]
RDA-F2-01M — 'Rich metadata is provided to allow discovery' (priority Essential) · FsF-F2-01M — F-UJI: 'Metadata includes descriptive core elements to support data findability' · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data'
“Raw FASTQ and h5 count matrix snRNA-seq data have been deposited at GEO and are publicly available as of the date of publication.”
The statement gives a route to the data with no stated precondition (publicly available now).
RDA-A1.1-01D — 'Data is accessible through a free access protocol' · FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · NSTC Desirable Characteristics of Data Repositories (2022) — 'Free and Easy Access'
Advisory · not in the published score
“publicly available”
The paper explicitly labels the data as 'publicly available' in the data availability statement, which is an access-level label.
FsF-A1-01M — F-UJI: 'Metadata contains access level and access conditions of the data' · RDA-A1-01M — metadata contains information to enable the user to get access to the data · COAR Controlled Vocabularies — Access Rights v1.0 (open / embargoed / restricted / metadata-onl
The data are from rats, not human subjects, and no gatekeeper is mentioned.
NIH Genomic Data Sharing Policy (NOT-OD-14-124) — controlled-access via a Data Access Committee · RDA-A1.2-01D — 'Data is accessible through an access protocol that supports authentication and · NIH DMS Policy Element 5 (NOT-OD-21-014) — Access, Distribution, or Reuse Considerations (conse
“as of the date of publication”
The paper states when the data become available (date of publication) but does not state how long they persist.
NIH DMS Plan Element 4 (NOT-OD-21-014) — Data Preservation, Access, and Associated Timelines · NSTC Desirable Characteristics (2022), Organizational Infrastructure: 'Retention Policy' · RDA-A2-01M — 'Metadata is guaranteed to remain available after data is no longer available'
“Raw FASTQ and h5 count matrix snRNA-seq data”
FASTQ and HDF5 (h5) are open, community-standard formats.
FsF-R1.3-02D — F-UJI: 'Data is available in a file format recommended by the target research co · RDA-R1.3-02D — data is expressed in a machine-understandable community standard · RDA-I1-01D — data uses a knowledge representation expressed in a standardised format
Advisory · not in the published score
No named community standard vocabulary, ontology, or minimum information checklist is explicitly applied to the data.
RDA-R1.3-01M — 'Metadata complies with a community standard' (priority Essential) · RDA-R1.3-01D — 'Data complies with a community standard' · RDA-I2-01M — '(Meta)data use vocabularies that follow FAIR principles'
“Rnor_6.0.96”— not found in the paper; verdict downgraded
The paper gives an identifier for the rat reference genome assembly (Ensembl Rnor_6.0.96) used. [downgraded to 'no' — no verifiable quote from the paper] [majority verdict 'no' (4/5 passes agreed)]
RDA-I3-01M — '(meta)data include references to other (meta)data' · RDA-I3-03M — 'metadata includes qualified references to other metadata' · FsF-I3-01M — F-UJI: 'Metadata includes links between the data and its related entities'
No reuse license is stated for the data; the CC BY-NC-ND license applies to the article only.
RDA-R1.1-01M — 'Metadata includes information about the licence under which the data can be reu · RDA-R1.1-02M — 'Metadata refers to a standard reuse licence' · RDA-R1.1-03M — 'Metadata refers to a machine-understandable reuse licence'
No version token or date is given to pin a specific snapshot of the data. [majority verdict 'no' (3/5 passes agreed)]
DataCite Metadata Schema 4.6 — the 'Version' property · RDA-R1.2-01M — provenance information (which version was used is provenance) · NSTC Desirable Characteristics of Data Repositories (2022) — 'Provenance', 'Retention Policy'
“This paper does not report original code.”
The paper states that no original code is reported, so no locator is given.
NIH DMS Policy Element 2 (NOT-OD-21-014) — 'Related Tools, Software and/or Code' · FAIR4RS Principles v1.0 (Chue Hong et al., 2022; RDA/FORCE11/ReSA) — FAIR Principles for Resear · FORCE11 Software Citation Principles (Smith, Katz & Niemeyer, 2016, PeerJ CS 2:e86)
“1RO1HL092577”
The paper provides specific grant numbers from named funders.
DataCite Metadata Schema 4.6 — 'FundingReference' property (funderName, funderIdentifier, award · Crossref Funder Registry — canonical funder identifiers for funding metadata · RDA-F2-01M — rich metadata provided to allow discovery (funding is part of the descriptive reco
Advisory · not in the published score
“Illumina Nextseq550”
The paper names specific instruments used for sequencing. [majority verdict 'yes' (4/5 passes agreed)]
RDA-R1.2-01M — 'Metadata includes provenance information according to community- specific standa · FsF-R1.2-01M — F-UJI: 'Metadata includes provenance information about data creation or generati · W3C PROV-O (W3C Recommendation, 2013) — the entity/activity/agent model of provenance
No documentation object (README, codebook) is named as accompanying the data [majority verdict 'no' (3/5 passes agreed)]
RDA-R1-01M — '(Meta)data are richly described with a plurality of accurate and relevant attribu · FsF-R1-01MD — F-UJI: 'Metadata specifies the content of the data' · NIH DMS Policy Element 3 (NOT-OD-21-014) — Standards (documentation and metadata to accompany t
Calibrated FAIR score — a parallel quality metric, independent of the DataRank citation score. See the full evaluation →
Base Score Contribution
0.416
From this paper's citation signal
Citation Network Contribution
0.0793
From 7 citing papers with measurable signal
Ranked by each citer's contribution to N(p) — log1p(Cq) divided by its reference count — out of 15 citers.
American Heart Association Inc
Grant: 18SFRN34230127
American Heart Association Inc
Grant: 20CDA35260081
Foundation for the National Institutes of Health
Grant: 1RO1HL092577
Foundation for the National Institutes of Health
Grant: 1R01HL157635
European Research Council
Grant: MAESTRIA 965286
National Institutes of Health
Grant: 961045
NHLBI NIH HHS
Grant: R01 HL157635
NHLBI NIH HHS
Grant: R01 HL092577
European Commission
MeSH Terms
Keywords