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Data for molecular dynamics simulations of Escherichia coli cytochrome bd oxidase with the Amber force field

Data in Brief(2021)10.1016/j.dib.2021.107401Source: DataRank Database

Data for molecular dynamics simulations of Escherichia coli cytochrome bd oxidase with the Amber force field is a research paper published in Data in Brief (2021). On theSindex it has a DataRank of 0. It has been cited 8 times.

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Open Access8 citations

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Enrichment:Funding (7 grants)OA: goldTopics (67)IDs (PubMed, PMC, OpenAlex)Annotations (2)SDGs (2)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

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Authors (5)

Christian Seitz ORCID,Vinícius Wilian D. Cruzeiro ORCID,J. Andrew McCammon ORCID,Andreas W. Götz,Surl-Hee Ahn ORCID

Live enrichment

PubMed:34621930 PMC:PMC8481974 OpenAlex:https://openalex.org/W3157704987

National Institutes of Health

Grant: GM31749

National Institutes of Health

Grant: R01 GM100934

National Science Foundation

Grant: DGE-1650112

National Science Foundation

Grant: ACI-1548562

NIGMS NIH HHS

Grant: R01 GM031749

NIBIB NIH HHS

Grant: T32 EB009380

National Institutes of Health

Grant: 1R01GM100934-01

Quantum Chemistry of Proton Pumping by Cytochrome c Oxidases

goldLicense: cc-by

journalhttps://www.sciencedirect.com/science/article/pii/S2352340921006831/pdf

publisherhttps://www.sciencedirect.com/science/article/pii/S2352340921006831/pdf

publisherhttps://api.elsevier.com/content/article/PII:S2352340921006831?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2352340921006831?httpAccept=text/plain

journalhttps://doi.org/10.1016/j.dib.2021.107401

Fields of Study

Photosynthetic Processes and MechanismsProtein Structure and DynamicsHemoglobin structure and function0301 basic medicine03 medical and health sciences

Keywords

Escherichia coliBacteriaCytochromeHemeCampylobacter jejuniCampylobacterOxidase testProtein Data Bank (RCSB PDB)BiologyBiochemistryMicrobiologyChemistryEnzymeGeneticsGeneTuberculosisMolecular dynamicsAmber Force FieldCytochrome Bd OxidaseScience (General)2.2 Factors relating to the physical environment (hrcs-rac)3105 Genetics (for-2020)Q1-3900604 Genetics (for)2.2 Factors relating to the physical environmentAetiologyNetworking and Information Technology R&D (NITRD) (rcdc)3 Good Health and Well Being (sdg)3107 Microbiology (for-2020)Bioengineering (rcdc)Biological Sciences1112 Oncology and Carcinogenesis (for)Foodborne IllnessInfection (hrcs-hc)Infectious DiseasesNetworking and Information Technology R&D (NITRD)Infection570Oncology and CarcinogenesisComputer applications to medicine. Medical informatics0601 Biochemistry and Cell Biology (for)R858-859.7BioengineeringEmerging Infectious Diseases (rcdc)Vaccine RelatedRare Diseases (rcdc)Rare DiseasesBiodefenseBiodefense (rcdc)Data Article31 Biological Sciences (for-2020)PreventionData management and data science5404605 Data management and data science (for-2020)Orphan DrugEmerging Infectious DiseasesGood Health and Well BeingInfectious Diseases (rcdc)Orphan Drug (rcdc)Biochemistry and Cell BiologyTuberculosis (rcdc)

Sustainable Development Goals

SDG 2: 2. Zero hungerSDG 3: 3. Good health

Data for molecular dynamics simulations of Escherichia coli cytochrome bd oxidase with the Amber force field

FAIR Checklist

Authors (5)

Funding (7 grants)

Open Access

Topics

Annotations (Europe PMC)