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Repression of Divergent Noncoding Transcription by a Sequence-Specific Transcription Factor

Molecular Cell(2018)10.1016/j.molcel.2018.10.018Source: DataRank Database

Repression of Divergent Noncoding Transcription by a Sequence-Specific Transcription Factor is a research paper published in Molecular Cell (2018). On theSindex it has a DataRank of 1.6. It has been cited 53 times, with 42 citing works in its 1-hop citation network.

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1.6DataRank · unranked

Scored on demand from live citation data

53 citations · 42 citing works in its network

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›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (10 grants)OA: hybridTopics (44)Linked Datasets (6)DataCite Reuse (6)IDs (PubMed, PMC)Annotations (3)

FAIR Checklist

Context only (not used in score)

Findable (2/2)

Has DOI
Indexed in repositories

Accessible (0/2)

Interoperable (2/2)

DataCite relations
Linked datasets

Reusable (0/3)

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DataRank Breakdown

Base Score 37%Citation Network 63%

Base Score Contribution

0.598

From this paper's citation signal

Citation Network Contribution

1.0

From 37 citing papers with measurable signal

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Top 5 citers driving the network score

Ranked by each citer's contribution to N(p) — log1p(C_q) divided by its reference count — out of 42 citers.

Borf: Improved ORF prediction in de-novo assembled transcriptome annotation
bioRxiv (Cold Spring Harbor Laboratory)202119 citations32 referencesContributes 0.094
A cascade of transcriptional repression determines sexual commitment and development in Plasmodium falciparum
Nucleic Acids Research202176 citations47 referencesContributes 0.092
Opposing chromatin remodelers control transcription initiation frequency and start site selection
Nature Structural & Molecular Biology2019146 citations63 referencesContributes 0.079
General Regulatory Factors Control the Fidelity of Transcription by Restricting Non-coding and Ectopic Initiation
Molecular Cell201869 citations55 referencesContributes 0.077
Perturbing proteomes at single residue resolution using base editing
Nature Communications202073 citations78 referencesContributes 0.055

Authors (7)

Harshil Patel,Minghao Chia,Fabien Moretto,David Frith,Ambrosius P. Snijders

Live enrichment

PubMed:30576656 PMC:PMC6310685

Francis Crick Institute

Grant: FC001203

The Francis Crick Institute

Grant: 10011

Cancer Research UK

Grant: 17576

The Francis Crick Institute

Grant: 10002

The Francis Crick Institute

Grant: 10203

Wellcome Trust

Grant: unidentified

unidentified

Medical Research Council

Wellcome Trust

Agency for Science, Technology and Research

Cancer Research UK

hybridLicense: cc-by

publisherhttp://www.cell.com/article/S1097276518308785/pdf

publisherhttps://api.elsevier.com/content/article/PII:S1097276518308785?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S1097276518308785?httpAccept=text/plain

repositoryhttp://europepmc.org/pmc/articles/PMC6310685

repositoryhttps://www.ncbi.nlm.nih.gov/pmc/articles/6310685

Fields of Study

0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

Saccharomyces cerevisiaeTelomere-Binding ProteinsSaccharomyces cerevisiae ProteinsRibosomal ProteinsTranscription FactorsRNA, FungalRNA, UntranslatedChromatin Assembly and DisassemblyTranscription, GeneticGene Expression Regulation, FungalBinding SitesProtein BindingProtein Interaction Domains and MotifsPromoter Regions, GeneticShelterin Complex

Keywords

PromoterTranscriptionTranscription factorRepressionYeastNoncoding RNARap1RscDirectionalityDivergentRibosomal ProteinsBinding SitesRNA, UntranslatedSaccharomyces cerevisiae ProteinsTranscription, GeneticTelomere-Binding ProteinsRNA, FungalSaccharomyces cerevisiaeChromatin Assembly and DisassemblyArticleShelterin ComplexGene Expression Regulation, FungalProtein Interaction Domains and MotifsPromoter Regions, GeneticProtein BindingTranscription Factors

Additional file 1 of High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts

10.6084/m9.figshare.13578693.v1figshare

Additional file 1 of High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts

10.6084/m9.figshare.13578693figshare

Additional file 7 of High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts

10.6084/m9.figshare.13578711.v1figshare

Additional file 7 of High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts

10.6084/m9.figshare.13578711figshare

Additional file 9 of High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts

10.6084/m9.figshare.13578717.v1figshare

Additional file 9 of High-resolution analysis of cell-state transitions in yeast suggests widespread transcriptional tuning by alternative starts

10.6084/m9.figshare.13578717figshare