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iScore: An MPI supported software for ranking protein–protein docking models based on a random walk graph kernel and support vector machines

SoftwareX(2020)10.1016/j.softx.2020.100462Source: DataRank Database

iScore: An MPI supported software for ranking protein–protein docking models based on a random walk graph kernel and support vector machines is a research paper published in SoftwareX (2020). On theSindex it has a DataRank of 0. It has been cited 9 times.

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Enrichment:Funding (7 grants)OA: goldTopics (28)IDs (PubMed, OpenAlex)

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Authors (6)

Yong Gyu Jung ORCID,Vasant Honavar ORCID,Cunliang Geng ORCID,Alexandre M. J. J. Bonvin ORCID,Li C. Xue ORCID

Live enrichment

PubMed:35419466 OpenAlex:https://openalex.org/W3019039924

China Scholarship Council

Grant: 201406220132

Netherlands eScience Center

Grant: 027016G04

Nederlandse Organisatie voor Wetenschappelijk Onderzoek

Grant: 722.014.005

Shrinking protein-RNA conformational space with artificial intelligence

National Center for Advancing Translational Sciences

Grant: UL1 TR002014-01

National Science Foundation

Grant: ACI 1640834

National Institutes of Health

Grant: 2UL1TR002014-05A1

Penn State Clinical and Translational Science Institute

NCATS NIH HHS

Grant: UL1 TR002014

goldLicense: cc-by-nc-nd

journalhttp://www.softxjournal.com/article/S2352711019303061/pdf

publisherhttp://www.softxjournal.com/article/S2352711019303061/pdf

publisherhttps://api.elsevier.com/content/article/PII:S2352711019303061?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2352711019303061?httpAccept=text/plain

journalhttps://doi.org/10.1016/j.softx.2020.100462

Fields of Study

Protein Structure and DynamicsComputational Drug Discovery MethodsBioinformatics and Genomic Networks0301 basic medicine0303 health sciences03 medical and health sciences

Keywords

Computer scienceExecutableGraphDocking (animal)SoftwareTheoretical computer scienceWorkflowSupport vector machineArtificial intelligenceProgramming languageDatabaseSupport vector machinesPosition-specific scoring matrix (PSSM)CMBI - Radboud University Medical CenterGraph kernel functionsArticleQA76.75-76.765Protein–protein dockingRadboudumc 2: Cancer development and immune defence RIMLS: Radboud Institute for Molecular Life SciencesMPIComputer softwareScoring