Pilot corpus: NIH-funded biomedical datasets. Any DOI can be scored on demand — network effects sharpen as coverage grows.

Reconstruction of dynamic regulatory networks reveals signaling-induced topology changes associated with germ layer specification

Stem Cell Reports(2022)10.1016/j.stemcr.2021.12.018Source: DataRank Database

Reconstruction of dynamic regulatory networks reveals signaling-induced topology changes associated with germ layer specification is a research paper published in Stem Cell Reports (2022). On theSindex it has a DataRank of 0. It has been cited 21 times.

N/A

0DataRank · unranked

Scored on demand from live citation data

Open Access21 citations

Download PDF

Cite:

Linked data & code

geo doi

DataRank reads this dataset's downstream impact straight off the citation graph — no black box, no proprietary weighting. How is this computed?

›Methodology & internals

datarank_citation_only_1hop_v6· scope data_onlyMethodology

Pipeline:MetadataData-paper checkEnrichmentCitation networkScoring

Enrichment:Funding (5 grants)Impact (FWCI 1.33)OA: goldTopics (60)IDs (PubMed, PMC, OpenAlex)Annotations (2)

FAIR Checklist

Context only (not used in score)

Findable (1/2)

Has DOI

Accessible (1/2)

Open Access

Interoperable (0/2)

Reusable (0/3)

FAIR checklist signals are shown for context only and do not affect DataRank scoring.

Run a calibrated FAIR evaluation for this paper →

We only score data papers we can read in full — never from an abstract alone.

Authors (5)

Abby Spangler ORCID,Qin Bian ORCID,Jessica Y. Kasamoto,Patrick Cahan ORCID,Emily Y. Su ORCID

Live enrichment

PubMed:35090587 PMC:PMC8828556 OpenAlex:https://openalex.org/W4220883211

National Science Foundation

Grant: DGE-1746891

National Institutes of Health

Grant: R35GM124725

NIGMS NIH HHS

Grant: T32 GM007057

National Institutes of Health

Grant: 5R35GM124725-05

From intra to intercellular regulatory networks that define cell type identity

National Science Foundation

Grant: 1746891

Graduate Research Fellowship Program (GRFP)

FWCI

1.33

Citation Percentile

0.8%

Citation Trend

2023

2024

2025

2026

goldLicense: cc-by-nc-nd

journalhttp://www.cell.com/article/S2213671121006573/pdf

publisherhttp://www.cell.com/article/S2213671121006573/pdf

publisherhttps://api.elsevier.com/content/article/PII:S2213671121006573?httpAccept=text/xml

publisherhttps://api.elsevier.com/content/article/PII:S2213671121006573?httpAccept=text/plain

journalhttps://doi.org/10.1016/j.stemcr.2021.12.018

Fields of Study

Single-cell and spatial transcriptomicsGene Regulatory Network AnalysisPluripotent Stem Cells Research0301 basic medicine0303 health sciences03 medical and health sciences

MeSH Terms

Mouse Embryonic Stem CellsAnimalsCell DifferentiationEndodermGerm LayersMesodermSignal TransductionPhosphatidylinositol 3-KinasesWnt ProteinsMiceKruppel-Like Transcription FactorsGene Regulatory NetworksSingle-Cell Analysis

Keywords

MesodermBiologyGene regulatory networkCell fate determinationWnt signaling pathwayNetwork topologyEndodermComputational biologyTranscription factorFGF and mesoderm formationGerm layerEmbryonic stem cellNodal signalingRegulation of gene expressionCell biologyTopology (electrical circuits)Computer scienceSignal transductionGeneGeneticsGene expressionComputer networkInduced pluripotent stem cellGastrulationWntEmbryoid bodyNetwork InferenceDirected DifferentiationPeg3Single-cell Rna-seqResourceKruppel-Like Transcription FactorsCell DifferentiationMouse Embryonic Stem CellsWnt ProteinsMicePhosphatidylinositol 3-KinasesAnimalsGene Regulatory NetworksSingle-Cell AnalysisGerm Layers

Reconstruction of dynamic regulatory networks reveals signaling-induced topology changes associated with germ layer specification

FAIR Checklist

Authors (5)

Funding (5 grants)

Impact

Open Access

Topics

Annotations (Europe PMC)